BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg893902 Length=453 Score E Sequences producing significant alignments: (Bits) Value AT5G19710.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 401 2e-111 > AT5G19710.1 | Symbols: | BEST Arabidopsis thaliana protein match is: HPT phosphotransmitter 4 (TAIR:AT3G16360.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:6664745-6666107 REVERSE LENGTH=345 Length=345 Score = 401 bits (217), Expect = 2e-111 Identities = 266/289 (92%), Gaps = 5/289 (2%) Strand=Plus/Plus Query 166 GGAGCGAGATCCAATAGAGGTACCCATGATTACCAAATGCATTCTTCAGTTAGAAAGCAG 225 ||||||||| |||||||||||||||||||||||| ||||||||||| | |||||||||| Sbjct 61 GGAGCGAGAGCCAATAGAGGTACCCATGATTACCCGATGCATTCTTCGGCTAGAAAGCAG 120 Query 226 CAGCGCCAGGCTAGTTATAATATTTTTGTAATTTGCATCGGTGCTAGCAAAGTTTTTAAG 285 |||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| Sbjct 121 CAGCGCCAGGCTAGTTATAATATTTTTGTAAT---CATCGGTGCTATCAAAGTTGTTAAG 177 Query 286 GAACTTCAGAAGGCAAACACATCACTCAAAGCTAGCAACACAGAAGGAATAAAAGTAGCA 345 |||||| ||||||||||||||| ||||||||| |||||| ||||||| |||||| |||| Sbjct 178 GAACTTAAGAAGGCAAACACATTTCTCAAAGCTGGCAACATAGAAGGAGTAAAAGGAGCA 237 Query 346 CTAGG-TGATATTAAGAAAGAGCACAGTAAACTCCGCGCAAAGTTTGAGACTTATTTCCA 404 || | |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 238 CT-GCCTGATATTAAGAAAGAGCACAGTGAACTCCGGGCAAAGTTTGAGACTTATTTCCA 296 Query 405 GTTGATGAGACAAGCTGGCCCAACAGATGTAGCTGTGAATTCAAGCTGA 453 |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 297 GTTGATGAGACAAGCTGGTCCAACAGATGTAGCTGTGAATTCAAGCTGA 345 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21564864321 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5