BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg894086 Length=630 Score E Sequences producing significant alignments: (Bits) Value AT5G22160.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 579 1e-164 > AT5G22160.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:7346944-7349255 FORWARD LENGTH=1062 Length=1062 Score = 579 bits (313), Expect = 1e-164 Identities = 500/585 (85%), Gaps = 33/585 (6%) Strand=Plus/Plus Query 62 CTCCTCCTCCTCGTCG-TAGATGGTGGTCACGACCAATAGTGACTATACCGCCAACG-CA 119 |||||||||||||| | | ||||||||||||||||||||||||| | ||| || | | Sbjct 26 CTCCTCCTCCTCGT-GTTGGATGGTGGTCACGACCAATAGTGACCGTGCCGTTAA-GTAA 83 Query 120 TGTTCGTGAAGCCACTTGTATGGAAACTACGGTTTG-CTGTACACCTTGTTGGGCCGG-C 177 || ||||||| ||||||| | ||||||||| ||||| || |||||| ||||| ||||| | Sbjct 84 TGATCGTGAACCCACTTGCAAGGAAACTACTGTTTGCCT-TACACCCTGTTGCGCCGGCC 142 Query 178 TTATTCACCATCCTCGCCGTTTATTTATTGCTCTTTCACGTCATCGATAATGCTCGCTGC 237 || ||||||||| |||| || ||||||||| ||||||||||| || ||||||||| |||| Sbjct 143 TT-TTCACCATCGTCGCTGTATATTTATTGATCTTTCACGTCGTCAATAATGCTCACTGC 201 Query 238 CAAGCCAAATTCTCCATCCAATCCATCGCTGTCTCTCCCTCCTCTGCCACGTGGCAC-TT 296 || |||||||||||||||||||||||||| |||||||||||||| |||||||||||| | Sbjct 202 CACGCCAAATTCTCCATCCAATCCATCGCCGTCTCTCCCTCCTCCGCCACGTGGCACGTG 261 Query 297 GATTTCCTCGTCAAAAA-CC---CT--A-G----C--TC--C-A--G--CCGATGAAACT 336 ||||||||||||||||| || || | | | || | | | ||||||||||| Sbjct 262 GATTTCCTCGTCAAAAACCCTAGCTCCAGGTACTCTATCTACTACGGACCCGATGAAACT 321 Query 337 ACCGTGAGTCTCGGTCCTTTAAACGCTGCCGTTTTAGATACTTTTCACGAACGTAAGTCT 396 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 322 GCCGTGAGTCTTGGTCCCGTAAACGCTGCCGTTTTAGATACTTTTCACGAACGTAAGTCT 381 Query 397 CGAAGTCACACGGCCTTCTCAGTGGATTTCGTTGCCGAGGGTAATCCAAACGGAGTCGTT 456 |||||||||||||| ||||||||||||||| ||||||||||||| || ||||| |||||| Sbjct 382 CGAAGTCACACGGCTTTCTCAGTGGATTTCATTGCCGAGGGTAACCCTAACGGCGTCGTT 441 Query 457 TTCGAAGAATTATATATCAAATTAAAGGCGACTCATAAGGTTTACAGATATGTCTTTGAT 516 ||| ||||||||||| ||||||||||| ||| |||||| ||||| || ||||||||| | Sbjct 442 TTCAAAGAATTATATGTCAAATTAAAGACGAAACATAAGATTTACGGAAATGTCTTTGGT 501 Query 517 AACGCTGGACATATTGATATCAGGTGTCATAATCTAACCCGAAGCTATGAGAACGTTGAG 576 | ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 502 TATGCTGGACATATTGATATAAGGTGTCAAAATCTAACCCGAAGCTATGAGAACGTTGAG 561 Query 577 AGGATTCAATG-TCACTCTTCTTACACAAAGT-TGGAGACTTTGA 619 | |||||| || | |||||||||||||| | | || || |||||| Sbjct 562 AAGATTCATTGCT-ACTCTTCTTACACAGA-TATGAAGGCTTTGA 604 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30391658935 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5