BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg894206
Length=1554
Score E
Sequences producing significant alignments: (Bits) Value
AT5G23270.1 | Symbols: STP11, ATSTP11 | sugar transporter 11 | ... 2372 0.0
AT3G19940.1 | Symbols: | Major facilitator superfamily protein... 372 6e-102
AT3G19930.1 | Symbols: STP4, ATSTP4 | sugar transporter 4 | chr... 265 1e-69
> AT5G23270.1 | Symbols: STP11, ATSTP11 | sugar transporter 11
| chr5:7838906-7841026 FORWARD LENGTH=1923
Length=1923
Score = 2372 bits (1284), Expect = 0.0
Identities = 1467/1556 (94%), Gaps = 9/1556 (1%)
Strand=Plus/Plus
Query 1 ATGGCAGGAGGGGCTTTTATCGACGAGAGTGGCCATGGAGGAGAATACGAAGAAGGTCGG 60
|||||||||||||| ||||| ||||||||||||||||||||||| ||| ||||||||
Sbjct 227 ATGGCAGGAGGGGCATTTATAGACGAGAGTGGCCATGGAGGAGACTAC---GAAGGTCGT 283
Query 61 GTAACCGCATTTGTCATGATTACCTGCATTGTTGCTGCAATGGGTGGTCTACTCTTCGGT 120
|||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||| |||
Sbjct 284 GTAACCGCGTTTGTCATGATAACCTGCATTGTAGCTGCAATGGGTGGTCTCCTCTTTGGT 343
Query 121 TACGACATCGGTATCTCAGGAGGAGTGACATCAATGGAGGAGTTTCTAACGAAATTCTTC 180
|||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 344 TACGACATTGGTATCTCAGGAGGAGTGATATCAATGGAGGACTTTCTAACGAAATTCTTC 403
Query 181 CCCGACGTGCTTCGTCAAATGCAAAACGAAACAGGGCGTGAAACAGAGTACTGTAAATAT 240
|| |||||||||||||||||||||||| ||| ||||||||||||||| || |||||||||
Sbjct 404 CCTGACGTGCTTCGTCAAATGCAAAACAAAAGAGGGCGTGAAACAGAATATTGTAAATAT 463
Query 241 GATAATGAGCTTCTCACTCTTTTCACTTCCTCTCTTTACCTCGCTGCTTTGTTCGCTTCT 300
|| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 464 GACAATGAGCTTCTTACTCTCTTCACTTCCTCTCTTTACCTCGCTGCTTTGTTCGCTTCT 523
Query 301 TTCCTTGCATCGACCATTACAAGGCTTTTTGGTCGGAAGGTCTCAATGACGATCGGGGGT 360
|||||||| || |||||||||||||||||||| ||||||||||||||| |||||| |
Sbjct 524 TTCCTTGCCTCCACCATTACAAGGCTTTTTGGCCGGAAGGTCTCAATGGTTATCGGGTCT 583
Query 361 TTTGCTTTTCTCACTGGAGCTCTTCTCAACGGTTTAGCTATCAACCTCGAGATGTTGATC 420
| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 584 CTCGCTTTTCTCTCTGGAGCTCTTCTCAACGGTTTAGCTATCAACCTCGAGATGTTGATC 643
Query 421 ATCGGGCGGTTATTTCTCGGTGTAGGTGTCGGATTCGCTAACCAATCTGTTCCTCTTTAC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 644 ATCGGGCGGTTATTTCTCGGTGTAGGTGTCGGATTCGCTAACCAATCTGTTCCTCTTTAC 703
Query 481 CTCTCTGAGATGGCTCCTGCTAAGATCAGAGGAGCTCTCAACATTGGTTTTCAATTAGCA 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 704 CTCTCTGAGATGGCTCCTGCTAAGATCAGAGGAGCTCTCAACATTGGTTTTCAATTAGCA 763
Query 541 GTCACGATCGGGATCTTAGCCGCGAACGTTGTCAATTACGTGACCCCAAAGCTCAAGAAC 600
|||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 764 ATCACGATCGGGATCTTAGCCGCGAACATTGTCAATTACGTGACCCCAAAGCTCCAGAAC 823
Query 601 GGGATCGGATGGAGATTATCTGTCGGTTTAGCTGGAGTTCCGGCCTTTATGATGCTCCTC 660
||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||
Sbjct 824 GGGATCGGATGGAGATTATCTCTCGGTTTAGCTGGAGTTCCGGCCGTTATGATGCTTGTC 883
Query 661 GGATGCTTTTTCTTGCCAGATACGCCAAACTCAATCCTTGAACGTGGAAACAAAGAAAAA 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 884 GGATGCTTTTTCTTGCCAGATACGCCAAACTCAATCCTTGAACGTGGAAACAAAGAAAAG 943
Query 721 GCTAAGGAGATGTTGCAGAAGATCAGAGGAACCATGGAGGTCGACCATGAGTTTAATGAA 780
|||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 944 GCTAAGGAGATGCTGCAGAAGATCAGAGGAACCATGGAGGTTGAGCATGAGTTTAATGAA 1003
Query 781 CTTTGCAACGCGTGTGA-GTCCGCGAAGAGAGTTAAGCATCCATGGACGAACATAATGCA 839
||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||
Sbjct 1004 CTTTGCAACGCGTGTGAAG-CCGCGAAGAAAGTTAAGCATCCATGGACGAACATAATGCA 1062
Query 840 AGCTCGTTATCGACCGCAGCTCACGTTCTGTACCTTCATCCCGTTCTTCCAGCAGCTAAC 899
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1063 AGCTCGTTATCGACCGCAGCTCACGTTTTGTACCTTCATCCCATTCTTCCAGCAGCTAAC 1122
Query 900 CGGGATCAACGTCATTATGTTCTATGCACCTGTTCTGTTTAAGACAATTGGTTTTGGAAA 959
||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1123 CGGGATCAATGTCATTATGTTCTATGCACCTGTTCTGTTTAAGACCATCGGTTTTGGAAA 1182
Query 960 TGACGCATCTCTTATATCCGCAGTCATCACCGGTCTTGTCAATGTCCTCTCCACCATTGT 1019
|||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1183 TGACGCCTCTCTCATATCCGCAGTTATCACCGGTCTTGTCAATGTCCTTTCCACCATTGT 1242
Query 1020 TTCCATCTACTCCGTCGACAAATTCGGACGCAGAGCTTTGTTTCTTCAAGGTGGTTTCCA 1079
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1243 CTCCATCTACTCCGTTGACAAATTCGGACGAAGAGCTTTGTTTCTTCAAGGTGGTTTTCA 1302
Query 1080 GATGATCTTGACCCAGATCGCGGTTGGATCGATGATCGGGTGGAAATTTGGATTCAACGG 1139
||||||| |||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 1303 GATGATCGTGACCCAGATCGCGGTCGGGTCGATGATCGGATGGAAATTTGGATTCAACGG 1362
Query 1140 GGAAGGAACATT-GTCAGAGGTTGATGCGGATATAATCTTGGCATTGATATGTCTCTATG 1198
|||||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 1363 GGAAGGAA-ATTTGTCAGGGGTTGATGCGGATATAATCTTGGCACTGATATGTCTCTATG 1421
Query 1199 TGGCGGGTTTTGCGTGGTCATGGGGACCGTTGGGATGGTTGGTACCGAGTGAGATATGTC 1258
|||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1422 TGGCGGGTTTCGCGTGGTCATGGGGACCGTTGGGATGGTTAGTGCCGAGTGAGATATGTC 1481
Query 1259 CATTGGAAATTAGATCAGCAGGACAATCGTTAAACGTTTCGGTGAACATGTTCTTCACCT 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1482 CATTGGAAATTAGATCAGCAGGACAATCGTTAAACGTTTCGGTGAACATGTTCTTTACAT 1541
Query 1319 TCTTCATTGGACAATTCTTCTTGACGATGCTTTGCCATTTGAAGTTTGGTCTGTTCTACT 1378
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
Sbjct 1542 TCTTCATTGGACAATTCTTCTTGACGATGCTTTGCCATATGAAGTTTGGTTTGTTCTATT 1601
Query 1379 TCTTCGCCGGCATGGTCTTGATCATGACCATTTTCATTTACTTCTTGTTGCCGGAGACAA 1438
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1602 TCTTCGCGGGTATGGTCTTGATCATGACCATTTTCATTTACTTCTTGTTGCCGGAGACAA 1661
Query 1439 AAGGAGTTCCAATTGAGGAGATGGGGAGAGTGTGGAAGGAGCATAGATATTGGGGGAAGT 1498
|||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||||| |
Sbjct 1662 AAGGTGTTCCGATTGAGGAGATGGGGAAAGTGTGGAAAGAGCATAGATATTGGGGGAAAT 1721
Query 1499 ATAGTCGTAatgatgatggtgatgatgttgatgatgatgTTTATATGTTTAGTTGA 1554
||||| |||||||||||||||||||||||||||||||| |||| | |||||||||
Sbjct 1722 ATAGTAATAATGATGATGGTGATGATGTTGATGATGATGCTTAT-T-TTTAGTTGA 1775
> AT3G19940.1 | Symbols: | Major facilitator superfamily protein
| chr3:6938211-6939975 FORWARD LENGTH=1545
Length=1545
Score = 372 bits (201), Expect = 6e-102
Identities = 1070/1473 (73%), Gaps = 126/1473 (9%)
Strand=Plus/Plus
Query 64 ACCGCATTTGTCATGATTACCTGCATTGTTGCTGCAATGGGTGGTCTACTCTTCGGTTAC 123
|||||||| || || || || || || || || || ||||| ||||| ||||| |||||
Sbjct 64 ACCGCATTCGTTATCATGACATGTATCGTCGCCGCCATGGGAGGTCTGCTCTTTGGTTAT 123
Query 124 GACATCGGTATCTCAGGAGGAGTGACATCAATGGAGGAGTTTCTAACGAAATTCTTCCC- 182
||| | || ||||||||||| || ||||||||||| |||||||| || || ||||||||
Sbjct 124 GACCTTGGAATCTCAGGAGGTGTTACATCAATGGAAGAGTTTCTTACCAAGTTCTTCCCT 183
Query 183 CGACGT-GCTTCGTCAAATGCAAAA--CGAAACAGGGCGTGAAACAGAGTACTGTAAATA 239
| | || | | || ||| |||| |||| || | || || | ||||||||||
Sbjct 184 C-AAGTAG-AGAGCCAGATGAAAAAGGCGAAGCA---C--GACACGGCTTACTGTAAATT 236
Query 240 TGATAATGAGCTTCT-CACTCTTTTCACTTCCTCTCTTTACCTCGCTGCT-TTGTTCGCT 297
|||||| | | || || | | |||||||| ||||| |||||||| ||| ||| | |||
Sbjct 237 TGATAACCAAATGCTCCAAT-TGTTCACTTCTTCTCTCTACCTCGCAGCTCTTG-TAGCT 294
Query 298 T-CTTTCCTTGCATCGA-CCATTACAAGGCTTTTTGGTCGGAAGGTCTCAATGACGATCG 355
| |||| | || || | || || ||| ||| || || ||||| ||| || |
Sbjct 295 TCCTTT-ATGGCTTC-AGTTATCACTAGGAAGCATGGACGTAAAGTCTCTATGTTTATTG 352
Query 356 GGGGTTTTGCTTTTCTCACT-GGAGCTCTTCTCAACG-GTTTAGCTATCAA--CCTCGAG 411
| || ||||||| |||| | || || ||| | |||| ||| || | || || |
Sbjct 353 GTGGACTTGCTTTCCTCA-TCGGTGCACTTTTTAACGCATTT-GCCGTTAATGTTTC-A- 408
Query 412 ATGTTGATCATCGGGCGGTTATTTCTCGGTGTAGGTGTCGGATTCGCTAACCAATCTGTT 471
||| | |||||||| | | || || ||||| ||||| ||||| ||||| || ||| |
Sbjct 409 ATGCTCATCATCGGTAGACTGTTGCTTGGTGTTGGTGTTGGATTTGCTAATCAGTCTACT 468
Query 472 CCTCTTTACCTCTCTGAGATGGCTCCTGCTAAGATCAGAGGAGCTCTCAACATTGGTTTT 531
|| | ||||| ||||| |||||||| || ||||| ||||||||| | ||||| ||||||
Sbjct 469 CCGGTGTACCTATCTGAAATGGCTCCAGCGAAGATAAGAGGAGCTTTAAACATCGGTTTT 528
Query 532 CA-ATTAGC-AGTCACGATCGGGATCTTAGCCGCGAACGT-TG-TCAATTACGTG-AC-C 585
|| | | || | | || || || ||| ||| ||||| | || | || || | | ||
Sbjct 529 CAGA-TGGCTA-TAACCATTGGAATCCTAGTGGCGAA--TCTGATTAACTATG-GAACAT 583
Query 586 CCAA-A--GCTCAAGAACGGGATCGGATGGAGATTATCTGTCGGTTTAGCTGGAGTTCCG 642
| || | |||||| | |||| ||| || | || ||| | |||||||| | |||||
Sbjct 584 CAAAGATGGCTCAA-CA-TGGAT-GGA-GG-G-TT-TCTTTAGGTTTAGCAGCTGTTCCA 636
Query 643 GCCT-TTATGATGCTCCTCGGATGC-TTT-TTCTTGCCAGATACGCCAAACTCAATCCTT 699
| || || | ||| | | |||| | ||| || ||||| ||||| |||||||| || ||
Sbjct 637 G-CTGTTGTTATGGTGATTGGAT-CATTTATT-TTGCCCGATACACCAAACTCGATGCTC 693
Query 700 GA-ACGTGG-AAACAAAGAAAAAGCTAAGGAGATGTTGCAGAAGATCA-GAGGAACCATG 756
|| | | || ||| || || |||| || | |||||| ||||||| | | || | | ||
Sbjct 694 GAGA-GAGGCAAA-AATGAGGAAGCAAAACAAATGTTGAAGAAGAT-ACGTGG-AGC-TG 748
Query 757 --GAGGTCGACCATGAGTTT-AATGAACT--TTGCAACGCGTG-TG-AGTCCG-CGAAGA 808
| || || ||||||||| || || || ||| | || || || || | | | || |
Sbjct 749 ACAATGTTGATCATGAGTTTCAA-GATCTCATTG--ATGC-TGTTGAAG-CTGCCAAAAA 803
Query 809 GAGT-TAAGCATCCATGGACGAACATAATGCA-AGCTCGTTATCGACCGCAGC--TCA-C 863
| || || ||||||||| |||||| ||| | || | ||| || | |||| | | |
Sbjct 804 G-GTGGAA-AATCCATGGAAGAACATCATGGAGAG-TAAATATAGA-C-CAGCTTTAATC 858
Query 864 GTTCTG-TACCTTCA-TCCCGTTCTTCCAGCAGCTAACCGGGATCAACGTCATTATGTTC 921
||||| | | || |||| || ||||| ||| | || || ||||| ||||||||||||
Sbjct 859 -TTCTGCT-CGGCCATTCCC-TTTTTCCAACAGATCACTGGAATCAATGTCATTATGTTC 915
Query 922 TATGCACCTGTTCTGTTTAAGACAATTGGTTTTGGAAATGACGCAT-CTCTTATATCCGC 980
|| || |||||||| || ||||| |||||||||| |||| || | ||||||| || ||
Sbjct 916 TACGCTCCTGTTCTCTTCAAGACTCTTGGTTTTGGTGATGATGC-TGCTCTTATGTCTGC 974
Query 981 AGTCATCACCGGTCTTGTCAATGTCCTCTCCACCATTGTTTCCATCTACTCCGTCGACAA 1040
|| || |||||| ||||||| | || || ||| |||| || || ||| | || || |
Sbjct 975 TGTTATAACCGGTGTTGTCAACATGCTTTCAACCTTTGTCTCAATTTACGCGGTTGATAG 1034
Query 1041 AT-TCGG-ACGCAGAGCTTTG--TTTCTTC-AAGGTGG-TTTCCAGATGATC--TTGACC 1092
|| | || | | | || ||| |||| || ||||||| || || ||| || |||
Sbjct 1035 ATAT-GGTA-G-A-AG-GTTGCTTTTCCTCGAAGGTGGCATT-CAAATGTTCATTTG--T 1086
Query 1093 CAG-ATCGCGGTTGGATCGATGATCGGGTGGAA-ATTTGGATTCAACGGGGAA--GGAAC 1148
||| || ||||| || | ||| |||| || ||| ||| | | |||| |||||
Sbjct 1087 CAGCTTC-TTGTTGGTTCTTTCATC-GGTGCAAGATTCGGA-ACCTC-AGGAACCGGAAC 1142
Query 1149 ATTGTCAG--AGGTTGATGCGGA-TATAATCTTGGCATTGATATGTCTCTATGTGGCGGG 1205
|||| | | || | || || | | |||| || || |||||| | || || || ||
Sbjct 1143 ATTGAC-GCCAGCAACA-GCAGACTGGATTCTT-GCTTTCATATGTGTGTACGTTGCAGG 1199
Query 1206 TTTTGCGTGGTCATGGGGACCGTTGGGATGGTTGGTACCGAGTGAGATATGTCCATTGGA 1265
||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1200 ATTTGCATGGTCATGGGGTCCATTGGGATGGTTGGTACCGAGTGAGATATGTCCATTGGA 1259
Query 1266 AATTAGATCAGCAGGACAATCGTTAAACGTTTCGGTGAACATGTTCTTCACCTT-CTTCA 1324
||||||| |||| |||||| | | ||||| ||||| |||||||||||||| || || ||
Sbjct 1260 AATTAGACCAGCGGGACAAGCCATCAACGTCTCGGTCAACATGTTCTTCACTTTTCT-CA 1318
Query 1325 TTGGACAATTCTTCTTGACGATGCTTTGCCATTTGAAGTTTGGTCTGTTCTACTTCTTCG 1384
|||| |||||||| ||||| |||||||| || ||||||||||||| ||||||||||| |
Sbjct 1319 TTGGTCAATTCTTTTTGACAATGCTTTGTCACATGAAGTTTGGTCTATTCTACTTCTTTG 1378
Query 1385 CCGGCATGGTCTT-GATCATGACCATTTTCATTTACTTCTTGTTGCCGGAGACAAAAGGA 1443
| ||||||| | ||||||||| ||||||||||||| |||||||||||||| |||||
Sbjct 1379 CAAGCATGGT-TGCGATCATGACGGTTTTCATTTACTTTTTGTTGCCGGAGACCAAAGGT 1437
Query 1444 GTTCCAATTGAGGAGATGGGGAGAGTGTGGAAG 1476
||||| ||||| |||||||| ||||| ||||||
Sbjct 1438 GTTCCTATTGAAGAGATGGGAAGAGTTTGGAAG 1470
> AT3G19930.1 | Symbols: STP4, ATSTP4 | sugar transporter 4 | chr3:6934773-6937120
FORWARD LENGTH=2099
Length=2099
Score = 265 bits (143), Expect = 1e-69
Identities = 1048/1469 (71%), Gaps = 126/1469 (9%)
Strand=Plus/Plus
Query 103 GGTGGTCTAC-TCTTCGGTTACGA-CATCGGTATCTCAGGAGGAGTGACATCAATGGAGG 160
|||||||| | ||||||| ||||| | |||| ||||||||||| || || |||||||| |
Sbjct 372 GGTGGTCT-CATCTTCGGATACGATC-TCGGGATCTCAGGAGGGGTAACCTCAATGGA-G 428
Query 161 AGTTTCTAACGAA-A-TTCTTCCCCGACGTGCTTCGTCAAATGCAAAACGAAACAG-G-G 216
|||| ||| | |||||||| |||| | | | || | || | | || || |
Sbjct 429 CCATTCT-TGGAAGAGTTCTTCCCTTACGT-C-T--AC-AA-G-AAGATG-AAGAGCGCA 479
Query 217 CGTGA-AACAGAGTACTGTAAATATGATAATGAGCTTCTCACTCTTTTCACTTCCTCTCT 275
| ||| ||| ||||||||| || ||||| | ||||||||||||| |||||||| |||||
Sbjct 480 CATGAGAAC-GAGTACTGTCGATTTGATAGTCAGCTTCTCACTCTCTTCACTTCGTCTCT 538
Query 276 TTACCTCGCTGCTTTGTTCG-CTTCTTTCCTTGCATCGACCATTACAAG-GCTTTTTGGT 333
|| | || |||||| | | ||||| || |||| || |||||||| || | |||| ||
Sbjct 539 CTATGTGGCGGCTTTGGT-GTCTTCTCTCTTTGCCTCCACCATTACTAGAG-TTTTCGGA 596
Query 334 CGG-AA-GGTCTCAATGACGATCGGGGGTTT-TGCTTTTCTCACT-GGAGCT-CTTCTCA 388
|| || || || ||| |||| ||||| ||| | ||| | || || ||| |||
Sbjct 597 AGGAAATGG--TCGATGTTTCTCGGTGGTTTCACCTTCT-TCA-TCGGTTCTGCTT-TCA 651
Query 389 ACGG-TTTAG-CTATCAACCTCGAGATG-TTGATCATCGGGCGGTTAT--TTCTCGGTGT 443
|||| ||| | | | ||| ||| ||| || |||| || | | ||| | || ||| |
Sbjct 652 ACGGCTTT-GCCCA-AAACATCGCTATGCTT-CTCATTGGTC-G-TATCCTACTTGGTTT 706
Query 444 AGGTGTCGGATTCGCTAACCAATCTGTTCCTCTTTACCTCTCTGAGATGGCTCCTGCTAA 503
|| ||||||||||| || |||||||| || |||| | || || ||||||||| | ||
Sbjct 707 CGGAGTCGGATTCGCCAATCAATCTGTACCGGTTTATTTATCAGAAATGGCTCCTCCGAA 766
Query 504 GATCAGAGGAGCTCTCAACATTGGTTTTCAATTAGCAG-TCA-CGATCGGGATCT-TAGC 560
| ||||||||| |||||| || |||||| |||| | | | | | || || | | |
Sbjct 767 TCTAAGAGGAGCTTTCAACAACGGGTTTCAAGTAGC-GATTATC-TTTGGTAT-TGTGGT 823
Query 561 CGCGAACG-TTGTCAATTACGTGACCCCAAAGCT-CAA-G-AACGGGATCGGATGGAGAT 616
|| |||| | |||||||| | ||| || || | || | ||| ||||||||||||
Sbjct 824 TGC-AACGATCATCAATTACTTCACCGCACAGATGAAAGGAAAC---ATCGGATGGAGAA 879
Query 617 TATCTGTCGGTTTAGCTGGAGTTCCGGCCTTTATGATGC-TCCTCGGATGCT-T-TTTCT 673
| ||| |||| |||||| | || || || | ||||| | | ||||| ||| | | ||
Sbjct 880 TCTCTCTCGGATTAGCTTGTGTCCCTGCAGTGATGAT-CATGATCGGA-GCTCTGATCCT 937
Query 674 TGCCAGATACGCCAAACTCAATCCTTGAACGTGGAAACAAAGAAAAAGCTAAGGAGATG- 732
| || || || || ||||| || | |||||||| ||| ||| | || ||||| |||
Sbjct 938 T-CCCGACACTCCCAACTCTCTCATCGAACGTGGCTACACCGAAGAGGCCAAGGAAATGC 996
Query 733 TTGCAGAAGATCAGAGGAACC-ATGGAGGTCGACCATGAGTTT-AATGA--AC-TT--TG 785
|| ||| ||| |||||||| || || ||||| | |||||| || || | || ||
Sbjct 997 TT-CAGTCCATCCGAGGAACCAAT-GAAGTCGATGAAGAGTTTCAA-GATCTCATTGATG 1053
Query 786 CAACGCGTGTGAGTCCGCGAAG-AGAGTTAAGCATCCATGGACGAACATAATGCAAGCTC 844
||| | | | |||| | | ||| | ||| || || ||||||| |||||| |||| |||
Sbjct 1054 CAA-GTGAG-GAGT-C-C-AAGCA-AGTGAAACACCCATGGAAGAACATCATGCTTCCTC 1107
Query 845 GTTATC-GACCGC-A--GCTCACGTTCTGTACCTTCATCCCGTTCTTCCAGCAGCTAACC 900
|||| | |||| | | | ||| | || | |||||| || ||||| || || || |||
Sbjct 1108 GTTA-CAGACCACAATTGATCATG-ACT-T-GCTTCATTCCTTTCTTTCAACAACTTACC 1163
Query 901 GGGATCAACGTCATTATGTTCTATGCACCTGTTCTGTT-TAAGACAATTGGTTTTGGAAA 959
|| ||||| ||||||| ||||| || || ||| |||| || || | || || || |
Sbjct 1164 GGAATCAATGTCATTACCTTCTACGCCCCGGTTTTGTTCCAA-ACCCTCGGGTTCGGTAG 1222
Query 960 TGACGCATCTCTTATATCCGC-AGTCATCACCGGTCTTGTCAATG-TCCTCTCCACCATT 1017
| || || || |||| || | | | || ||| | || | | || | | ||| ||
Sbjct 1223 CAAAGCTTCCCTCCTATCAGCTA-TGGTAACGGGTATCATCGA-GCTCTTGTGTACC-TT 1279
Query 1018 -GTTTCCATCTACT-CCGTCGACAAATTCGGACGCAG-AGCTTTGTTTCTTCAAGGTGGT 1074
|| || | | | | || || | || ||| | || | | ||||| || ||||| |||
Sbjct 1280 CGTCTCTGT-TTTTACAGTGGATAGGTTTGGAAGAAGAATC-TTGTTCCTCCAAGGAGGT 1337
Query 1075 TTCCAGATGATCTTGAC-C-CAGATCGCGGTTGGATCGATGATCGG-GTGGAAATTTGGA 1131
|||||||| |||| | | |||||||| ||||| | ||||| || || |||||||||
Sbjct 1338 ATCCAGATG--CTTGTCTCTCAGATCGCTATTGGAGCCATGATTGGAGT-CAAATTTGGA 1394
Query 1132 TTCAACGGGGA-AGG-AACATTGTCAGAGGTTGATGCGGATATAATCTTGGCATTGATAT 1189
| | || | ||| ||||| | | | | |||||| || ||||| ||||| |||| |
Sbjct 1395 GT-GGCTGGAACAGGAAACATAGGGAAAAG-TGATGCCAATCTAATCGTGGCACTGATCT 1452
Query 1190 GTC-TCTATGTGGCGGGTTTTGCGTGGTCATGGGGACCGTTGGGATGGTTGGTACCGAGT 1248
| | ||||||| |||||||| || ||||||||||||||||||||||||||||| || |||
Sbjct 1453 G-CATCTATGTAGCGGGTTTCGCCTGGTCATGGGGACCGTTGGGATGGTTGGTTCCTAGT 1511
Query 1249 GAGATATGTCCATTGGAAATTAGATCAGCAGGACAATCGTTAAACGTTTCGGTGAACATG 1308
||||||| |||| | || || ||||||||| ||| | ||||||||||||| ||||||
Sbjct 1512 GAGATATCTCCACTAGAGATCCGATCAGCAGCTCAAGCCATAAACGTTTCGGTCAACATG 1571
Query 1309 TTCTTCACCTTC-TTCATTGGA-CAATTCTTCTTGACGATGCTTTGCCATTTGAAGTTTG 1366
|||||||| ||| || | || || ||||| | || |||||||| || |||| || |
Sbjct 1572 TTCTTCACATTCCTTG-T-GGCTCAGCTCTTCCTCACTATGCTTTGTCACATGAAATTCG 1629
Query 1367 GTCTGTTCTACTTCTTCGCCGGCATGGTCT-TGATCATGACCATTTTCATTTACTTCTTG 1425
| || |||| |||||||||| | | || | | || ||||| || ||||| ||||| ||
Sbjct 1630 GACTATTCTTCTTCTTCGCCTTCTTTGT-TGTCATAATGACAATATTCATCTACTTGATG 1688
Query 1426 TTGCCGGAGACAAAAGGA-GTTCCAATTGAGGAGATGGGGAGAGTGTGGAAGG-AGCATA 1483
||||| |||||||| | | || ||||| || |||||| ||||||||||||| | |||
Sbjct 1689 TTGCCTGAGACAAA-GAATGTGCCAATCGAAGAGATGAACAGAGTGTGGAAGGCA-CATT 1746
Query 1484 GATAT-TGGGGGAAGTATAGTCGTAatga 1511
| | | ||||| |||| || || | ||||
Sbjct 1747 GGT-TCTGGGGAAAGTTTATTCCTGATGA 1774
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76706432760
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5