BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg894282
Length=2100
Score E
Sequences producing significant alignments: (Bits) Value
AT5G23980.1 | Symbols: ATFRO4, FRO4 | ferric reduction oxidase ... 2920 0.0
AT5G23990.1 | Symbols: ATFRO5, FRO5 | ferric reduction oxidase ... 2499 0.0
> AT5G23980.1 | Symbols: ATFRO4, FRO4 | ferric reduction oxidase
4 | chr5:8098052-8101323 REVERSE LENGTH=2256
Length=2256
Score = 2920 bits (1581), Expect = 0.0
Identities = 1934/2107 (92%), Gaps = 14/2107 (1%)
Strand=Plus/Plus
Query 1 ATGGGAGATATGAGAAGCTTAGTGAAGATGTTAATGGTGGTTCTATTTCTAGGATGGATT 60
|||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 42 ATGGGAAATATGAGAAGCTTAGTGAAGACGTTAATGGTGGTTCTATTTCTTGGATGGATT 101
Query 61 TTTATTTGGATTATGATTTCAACTGATCTTTACAAAAGTAAATGGACTCCAAAACTCGCC 120
|| |||||||||||||||||||| |||||| ||||| |||||||| || |||||| ||
Sbjct 102 TTGGTTTGGATTATGATTTCAACTAATCTTTTTAAAAGCAAATGGACCCCGAAACTCTCC 161
Query 121 AAGAATCTCAATACTACTTATTTTGGCCCTCAAGGCATGAATCTTGTGCTACTCACAGTT 180
||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct 162 AAGTATCTCAATACTACTTATTTTGGCCCTCAAGGCACGAATCTTGTGCTTCTCACGGTT 221
Query 181 CCAATGATGTTTATTGCGGTTCTGAGTTGTGTTTATTTGCATACCCAGAAGAAACCAACC 240
|| |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 222 CCCATGATGTTCATTGCGGTTCTAAGTTGTGTTTATTTGCATATCCAGAAGAAACCAACC 281
Query 241 CAACCTCAAAGAGAATGGAAATTAAAAGGGAGAATGGGAAGGGTAATAATGGTGATGAAC 300
|||||||||||||||||||| ||||| ||| |||||| ||||| || ||||||||||||
Sbjct 282 CAACCTCAAAGAGAATGGAAGCTAAAAAGGATAATGGGGAGGGTGATTATGGTGATGAAC 341
Query 301 CCATTGGGGATAGTAACGGCCACAGAGTTGATC-TTTTCTCTGTTGTTCGTGGCTCTTTT 359
|||||||||||||| || ||||| ||||| | | |||||||| ||||| || ||||||||
Sbjct 342 CCATTGGGGATAGTGACAGCCACGGAGTT-AACTTTTTCTCTATTGTTTGTTGCTCTTTT 400
Query 360 GATTTGGGCTCTCT-CTAGTCATCTATACCTTAGCTATCACGTCCACCTTCATAACCACG 418
| |||| | |||| | | | |||| |||||||||||||||||||||||||||||| |||
Sbjct 401 GGCTTGGTCCCTCTAC-AATTATCTCTACCTTAGCTATCACGTCCACCTTCATAACGACG 459
Query 419 ACAACGCCAAAATATGGCAGGCAAAGTTTAGGGCTTTTGGACTGAGAATAGGATACGTGG 478
||||||| ||||||||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct 460 ACAACGCAAAAATATGGCAGGCAAAGTTTAGGGCTTTCGGCCTGAGAATAGGATATGTGG 519
Query 479 GAC-ACTAT-TGCTGGGCCTTTTTGTTCTTCCCGGTGACAAGAGCCTCTACGATTCTGCC 536
| | || || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 520 G-CAAC-ATCTGTTGGGCCTTTTTGTTCTTCCCGGTGACAAGAGCCTCTACGATTCTGCC 577
Query 537 ACTTGTTGGGTTGACTTCGGAGTCAAGCATCAAATATCATATTTGGCTCGGACATGTCTC 596
|||||| ||||| || || |||||||| || |||||||| |||||||| |||||||||||
Sbjct 578 ACTTGTCGGGTTAACGTCAGAGTCAAGTATAAAATATCACATTTGGCTTGGACATGTCTC 637
Query 597 AAACTTTCT-CTTCCTTGTTCACACCGTGGTTTTCCTTATCTACTGGGCCATGACCAATC 655
||| ||| | |||||| |||||||| || ||||||||||||||||||||||||| ||||
Sbjct 638 AAA-TTTTTGCTTCCTCGTTCACACAGTCGTTTTCCTTATCTACTGGGCCATGATCAATA 696
Query 656 AGTTGATGGAGACGTTTGCATGGAATCCGACATATGTGTCTAACCTAGCCGGAACAATAG 715
|||||||||||||||||||||||||||| ||||||||| |||| || |||||||||||||
Sbjct 697 AGTTGATGGAGACGTTTGCATGGAATCCAACATATGTGCCTAATCTGGCCGGAACAATAG 756
Query 716 CGATGGTGATTGGAATTGCGATGTGGGTGACGAGTTTACCATCCTATAGACGAAAGAAGT 775
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 757 CGATGGTGATTGGAATAGCGATGTGGGTGACGAGTTTACCATCCTTTAGACGAAAGAAGT 816
Query 776 TCGAGCTTTTCTTCTACACTCACCAACTCTACGGTCTCTACATAATCTTCTACGTAATGC 835
| ||| ||||||||||||||||||| |||||||||||||| ||| ||||||||||||| |
Sbjct 817 TTGAGATTTTCTTCTACACTCACCATCTCTACGGTCTCTATATAGTCTTCTACGTAATCC 876
Query 836 ATGTGGGAGACTCGTGGTTCTGCATGATCTTGCCAAACATCTTCCTCTTCTTCATCGACC 895
| ||||||||||||||||||||||||||||||||||||||||| ||||| || || ||||
Sbjct 877 ACGTGGGAGACTCGTGGTTCTGCATGATCTTGCCAAACATCTTTCTCTTTTTTATAGACC 936
Query 896 GCTACTTGAGATTCTTACAATCCACCAAGAGATCCAGACTTGTTTCTGCTAAGATCTTAC 955
| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 937 GATACTTGAGATTCTTACAATCCACCAAGAGATCCAGACTTGTGTCTGCTAGGATCTTAC 996
Query 956 CTTCAGACAACCTCGAACTCACTTTCGCCAAAACTTCA-GGCGTACATTATACCCCAACA 1014
|||||||||||||||||||||||||| ||||||| || ||| |||||||||||||||||
Sbjct 997 CTTCAGACAACCTCGAACTCACTTTCTCCAAAACCCCAGGGC-TACATTATACCCCAACA 1055
Query 1015 AGCATATTGTTTCTACATGTGCCGAGCATTTCCAAGCTTCAATGGCATCCATTCACAATA 1074
||||||||||||||||||||||| |||||||| ||| |||||||||||||||| || |||
Sbjct 1056 AGCATATTGTTTCTACATGTGCCAAGCATTTCGAAGATTCAATGGCATCCATTTACTATA 1115
Query 1075 ACTTCGAGCAGCAACTTAGAGAAAGATACGCTAAGTGTTGTGATCAGGAGACAGGGAAGT 1134
||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||
Sbjct 1116 ACTTCGAGCAGCAACTTAGAGAAAGATACATTAAGTGTTGTAATCAGAAGACAGGGAAGT 1175
Query 1135 TGGACTCAAAAGCTTTACACACATCTCTCTTCTTCCATTGATTCTCTCGAAGTTTCTACT 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176 TGGACTCAAAAGCTTTACACACATCTCTCTTCTTCCATTGATTCTCTCGAAGTTTCTACT 1235
Query 1195 GAAGGTCCTTATGGCCCTAACTCTTTTGATGTCTCGAGGCATGGCTCTCTAATACTAGTG 1254
|| ||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 1236 GAGGGTCCGTATGGCCCTAACTCTTTTGATGTCTCAAGGCATAACTCTCTAATACTAGTG 1295
Query 1255 GGCGGTGGTAGCGGAGTTACACCCTTCATTTCGGTGATCAGGGAACTCATATTTCAGAGC 1314
||||||| |||||| ||||||||||||||||||| ||||| |||||||||| |||||||
Sbjct 1296 AGCGGTGGAAGCGGAATTACACCCTTCATTTCGGTTATCAGAGAACTCATATCTCAGAGC 1355
Query 1315 CAAAACCCGAGCGCAAAACTACCAAATGTTCTCCTTGTTTGTGCCTTTAAACATTACCAT 1374
|||||| |||| |||| |||||| ||||||| ||||||||| | |||||||||||||||
Sbjct 1356 CAAAACAAGAGCACAAAGCTACCAGATGTTCTTCTTGTTTGTTCTTTTAAACATTACCAT 1415
Query 1375 GATCTTGCGTTTTTAGACTTAATCTTCCCATCAG-ATATATCAGTCTCGGACATTTCTAA 1433
|||||||||||||||||| ||||||||||| | | |||| |||| ||| ||||||||||
Sbjct 1416 GATCTTGCGTTTTTAGACCTAATCTTCCCA-CTGGATATGTCAGCCTCTGACATTTCTAG 1474
Query 1434 GCTAAATCTCCGAATTGAGGCCTATATTACAAGAGAAGACAAGAAGCCCGAGACAACTGA 1493
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1475 GCTGAATCTCCGAATTGAGGCCTATATTACAAGAGAAGACAAGAAGCCCGAGACAACTGA 1534
Query 1494 TGATCACAGACTTCTTCAGACAAAATGGTTCAAACCACAGCCTCTAGACTCCCCTATCTC 1553
||| |||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||
Sbjct 1535 TGACCACAGACTTCTTCAAACAAAATGGTTTAAACCGCAGCCTCTAGACTCTCCTATCTC 1594
Query 1554 ACCTGTTCTTGGACCCAACAACTTCCTCTGGCTCGGAGTCGTGATTTTATCATCATTCTT 1613
||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| |
Sbjct 1595 ACCTGTTCTTGGACCAAACAACTTCCTCTGGCTCGGAGTTGTGATCTTATCATCATTCGT 1654
Query 1614 CATGTTTCTCTTGCTCATAGGGATTGTCACACGTTACTATGTATACCCTGTTGATCATAA 1673
|||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||
Sbjct 1655 CATGTTTCTCTTGCTCATAGGGATCGTCACACGTTACTATATATACCCTGTTGACCATAA 1714
Query 1674 CACAGGAAAGATCTACAATTTCTCGTATAGAGCGCTTTGGGATATGTTCCTAGGATCTGT 1733
|||||| |||||||||||||| ||||||| ||||||||| ||||| |||||| ||
Sbjct 1715 TACAGGATCCATCTACAATTTCTCATATAGAGGGCTTTGGGACATGTTTCTAGGAAGTGC 1774
Query 1734 GTGCATTTTCATCTCTTCAAGCATAGTTTTCTTATGGCGCAAGAAACAGAACAAAGAAGG 1793
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1775 GTGCATTTTCATCTCTTCCAGTGTAGTTTTCTTATGGCGCAAGAAACAGAACAAAGAAGG 1834
Query 1794 AGATAAGGAGTCCAAGAAGCAGGTACAGAGCGTAGAGTTTCAGACTCCCACGTCTTCTCC 1853
|||||||||| |||||| |||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 1835 GGATAAGGAGTTCAAGAATCAGGTACAAAGCGTAGAGTTTCAGACACCCACTTCTTCTCC 1894
Query 1854 AGGTTCATGGTTCCACGGCCACGAGAGAGAGCTCGAGAGCGTTCCCTATCAATCCATAGT 1913
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1895 AGGTTCATGGTTCCACGGCCACGAGAGAGAGCTCGAGAGTGTTCCCTATCAATCTATAGT 1954
Query 1914 ACAAGCCACTTCAGTCCACTTCGGCTCCAAACCTAATTTGAAAAAGATTCTATTTGAGGC 1973
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1955 ACAAGCCACTTCAGTCCACTTCGGCTCCAAACCTAATCTGAAAAAGATTCTACTTGAGGC 2014
Query 1974 AGAAGGTTCCGAAGACGTTGGGGTGATGGTTTGCGGACCAAGAAAGATGAGACATGAGGT 2033
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2015 TGAGGGTTCAGAAGACGTTGGGGTGATGGTTTGCGGACCAAGAAAGATGAGACATGAAGT 2074
Query 2034 TGCAAAGATATGTTCATCTGGTTTGGCTAAGAACCTTCACTTTGAGGCAATTAGTTTCAA 2093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2075 TGCAAAGATATGTTCATCTGGTTTGGCTAAGAACCTTCACTTTGAGGCAATTAGTTTCAA 2134
Query 2094 CTGGTGA 2100
|||||||
Sbjct 2135 CTGGTGA 2141
> AT5G23990.1 | Symbols: ATFRO5, FRO5 | ferric reduction oxidase
5 | chr5:8105565-8108590 REVERSE LENGTH=1974
Length=1974
Score = 2499 bits (1353), Expect = 0.0
Identities = 1561/1664 (94%), Gaps = 4/1664 (0%)
Strand=Plus/Plus
Query 439 GCAAAGTTTAGGGCTTTTGGACTGAGAATAGGATACGTGGGACACTATTGCTGGGCCTTT 498
|||||||||||||||||||||||||| ||||| ||||| || ||||| ||||||||||||
Sbjct 313 GCAAAGTTTAGGGCTTTTGGACTGAGGATAGGTTACGTAGGCCACTACTGCTGGGCCTTT 372
Query 499 TTGTTCTTCCCGGTGACAAGAGCCTCTACGATTCTGCCACTTGTTGGGTTGACTTCGGAG 558
|||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||
Sbjct 373 TTGTTCTTCCCGGTGACAAGAGCCTCTACGATCCTGCCACTTGTCGGGTTAACGTCGGAG 432
Query 559 TCAAGCATCAAATATCATATTTGGCTCGGACATGTCTCAAACTTTCT-CTTCCTTGTTCA 617
|||||||| |||||||| |||||||| |||||||||||||| ||| | |||||| |||||
Sbjct 433 TCAAGCATAAAATATCACATTTGGCTTGGACATGTCTCAAA-TTTTTGCTTCCTCGTTCA 491
Query 618 CACCGTGGTTTTCCTTATCTACTGGGCCATGACCAATCAGTTGATGGAGACGTTTGCATG 677
||| || |||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 492 CACAGTCGTTTTCCTTATCTACTGGGCCATGGTCAATAAGTTGATGGAGACGTTTGCATG 551
Query 678 GAATCCGACATATGTGTCTAACCTAGCCGGAACAATAGCGATGGTGATTGGAATTGCGAT 737
|||| | ||||||||| |||| || ||||||||||||||||||||||||||||| |||||
Sbjct 552 GAATGCAACATATGTGCCTAATCTGGCCGGAACAATAGCGATGGTGATTGGAATAGCGAT 611
Query 738 GTGGGTGACGAGTTTACCATCCTATAGACGAAAGAAGTTCGAGCTTTTCTTCTACACTCA 797
|||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct 612 TTGGGTGACGAGTTTACCATCCTTTAGACGAAAGAAGTTTGAAATTTTCTTCTACACTCA 671
Query 798 CCAACTCTACGGTCTCTACATAATCTTCTACGTAATGCATGTGGGAGACTCGTGGTTCTG 857
||| |||||||||||||||||| ||||||||| ||| || ||||||||||| ||||||||
Sbjct 672 CCATCTCTACGGTCTCTACATAGTCTTCTACGCAATCCACGTGGGAGACTCATGGTTCTG 731
Query 858 CATGATCTTGCCAAACATCTTCCTCTTCTTCATCGACCGCTACTTGAGATTCTTACAATC 917
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 732 CATGATCTTGCCAAACATCTTCCTCTTTTTCATAGACCGCTACTTGAGATTCTTACAATC 791
Query 918 CACCAAGAGATCCAGACTTGTTTCTGCTAAGATCTTACCTTCAGACAACCTCGAACTCAC 977
||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct 792 TACCAAGAGATCCAGACTTGTTTCCGCTAAGATTTTACCTTCAGACAACCTTGAACTCAC 851
Query 978 TTTCGCCAAAACTTCAGGCGTACATTATACCCCAACAAGCATATTGTTTCTACATGTGCC 1037
|||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 852 TTTCGCCAAAACTTCAGGTTTACATTATACACCAACAAGCATATTGTTTCTACATGTGCC 911
Query 1038 GAGCATTTCCAAGCTTCAATGGCATCCATTCACAATAACTTCGAGCAGCAACTTAGAGAA 1097
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 912 GAGCATTTCCAAGCTTCAATGGCATCCATTCACAATAACTTCGAGCAGCAACTTGGAGAA 971
Query 1098 AGATACGCTAAGTGTTGTGATCAGGAGACAGGGAAGTTGGACTCAAAAGCTTTACACACA 1157
|||||| ||||||||||| ||||| | ||||||||||||||||||||| |||||||||||
Sbjct 972 AGATACACTAAGTGTTGTAATCAGAAAACAGGGAAGTTGGACTCAAAAACTTTACACACA 1031
Query 1158 TCTCTCTTCTTCCATTGATTCTCTCGAAGTTTCTACTGAAGGTCCTTATGGCCCTAACTC 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 TCTCTCTTCTTCCATTGATTCTCTCGAAGTTTCTACTGAAGGTCCTTATGGCCCTAACTC 1091
Query 1218 TTTTGATGTCTCGAGGCATGGCTCTCTAATACTAGTGGGCGGTGGTAGCGGAGTTACACC 1277
|||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 1092 TTTTGATGTCTCGAGGCACGATTCTCTAATACTAGTGGGCGGTGGTAGCGGAGTTACACC 1151
Query 1278 CTTCATTTCGGTGATCAGGGAACTCATATTTCAGAGCCAAAACCCGAGCGCAAAACTACC 1337
||||||||| |||||||||||||||||||||||||||||||||| |||| |||| |||||
Sbjct 1152 CTTCATTTCCGTGATCAGGGAACTCATATTTCAGAGCCAAAACCGGAGCACAAAGCTACC 1211
Query 1338 AAATGTTCTCCTTGTTTGTGCCTTTAAACATTACCATGATCTTGCGTTTTTAGACTTAAT 1397
|||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||
Sbjct 1212 AAATGTTCTCCTTGTTTGTGCCTTTAAAAATTACCACGATCTTGCATTTTTAGACCTAAT 1271
Query 1398 CTTCCCATCAGATATATCAGTCTCGGACATTTCTAAGCTAAATCTCCGAATTGAGGCCTA 1457
|||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct 1272 CTTCCCTTCAGATATATCAGTCTCAGACATTTCTAAGCTGAATCTCCGAATTGAGGCTTA 1331
Query 1458 TATTACAAGAGAAGACAAGAAGCCCGAGACAACTGATGATCACAGACTTCTTCAGACAAA 1517
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1332 TATTACAAGAGAAGACAAGAAGCCCGAGACAACTGATGATCACAAACTTCTTCAGACAAA 1391
Query 1518 ATGGTTCAAACCACAGCCTCTAGACTCCCCTATCTCACCTGTTCTTGGACCCAACAACTT 1577
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1392 ATGGTTCAAACCGCAGCCTCTAGACTCTCCTATCTCACCTGTTCTTGGACCCAACAACTT 1451
Query 1578 CCTCTGGCTCGGAGTCGTGATTTTATCATCATTCTTCATGTTTCTCTTGCTCATAGGGAT 1637
||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||
Sbjct 1452 CCTTTGGCTCGGAGTTGTGATCTTATCATCATTCGTCATGTTTCTCTTGCTCATAGGGAT 1511
Query 1638 TGTCACACGTTACTATGTATACCCTGTTGATCATAACACAGGAAAGATCTACAATTTCTC 1697
||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| |
Sbjct 1512 CGTCACACGTTACTATATATACCCTGTTGACCATAACACAGGATCGATCTACAATTTCAC 1571
Query 1698 GTATAGAGCGCTTTGGGAT-ATGTTCCTAGGATCTGTGTGCATTTTCATCTCTTCAAGCA 1756
|||||||| |||||||| | ||||||||||||| |||||||||||||||||| |||||||
Sbjct 1572 GTATAGAGTGCTTTGGG-TCATGTTCCTAGGATGTGTGTGCATTTTCATCTCGTCAAGCA 1630
Query 1757 TAGTTTTCTTATGGCGCAAGAAACAGAACAAAGAAGGAGATAAGGAGTCCAAGAAGCAGG 1816
|| ||||||| |||||||||||| | || ||||||||||||||||| |||||||||||||
Sbjct 1631 TAATTTTCTTGTGGCGCAAGAAAGAAAATAAAGAAGGAGATAAGGACTCCAAGAAGCAGG 1690
Query 1817 TACAGAGCGTAGAGTTTCAGACTCCCACGTCTTCTCCAGGTTCATGGTTCCACGGCCACG 1876
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 1691 TACAGAGCGTAGAGTTTCAGACACCCACGTCTTCTCCAGGTTCATGGTTTCACGGCCACG 1750
Query 1877 AGAGAGAGCTCGAGAGCGTTCCCTATCAATCCATAGTACAAGCCACTTCAGTCCACTTCG 1936
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1751 AGAGAGAGCTCGAGAGCGTACCCTATCAATCTATAGTACAAGCCACTTCAGTCCACTTCG 1810
Query 1937 GCTCCAAACCTAATTTGAAAAAGATTCTATTTGAGGCAGAAGGTTCCGAAGACGTTGGGG 1996
|||||||||||||| |||||||||||||||||||||| || ||||| |||||||||||||
Sbjct 1811 GCTCCAAACCTAATCTGAAAAAGATTCTATTTGAGGCTGAGGGTTCGGAAGACGTTGGGG 1870
Query 1997 TGATGGTTTGCGGACCAAGAAAGATGAGACATGAGGTTGCAAAGATATGTTCATCTGGTT 2056
|||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1871 TGATGGTTTGCGGACCAAAAAAGATGAGACATGAAGTTGCAAAAATATGTTCATCTGGTT 1930
Query 2057 TGGCTAAGAACCTTCACTTTGAGGCAATTAGTTTCAACTGGTGA 2100
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1931 TGGCTAAGAACCTTCACTTTGAGGCAATTAGTTTCAACTGGTGA 1974
Score = 150 bits (81), Expect = 4e-35
Identities = 109/122 (89%), Gaps = 3/122 (2%)
Strand=Plus/Plus
Query 3 GGGAGATATGAGAAGCTTAGTGAAGATGTTAATGGTGGTTCTATTTCTAGGATGGATTTT 62
|||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 4 GGGA-ATATGAGAAGCTTAGTGAAGATGTTAATGGTGGTTCTGTTTCTTGGATGGATTTT 62
Query 63 TATTTGGATTATGATTTCAACTGATC-TTTACAAAAGTAAATGGACTCCAAAACTCGCCA 121
|||||||||||||||||||| ||| ||| ||||| | |||||| || ||||||||||
Sbjct 63 CGTTTGGATTATGATTTCAACTAATCGTTTCCAAAAC-ATATGGACCCCCAAACTCGCCA 121
Query 122 AG 123
||
Sbjct 122 AG 123
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104115930330
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5