BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg894287 Length=456 Score E Sequences producing significant alignments: (Bits) Value AT5G63840.1 | Symbols: RSW3, PSL5 | Glycosyl hydrolases family ... 490 5e-138 > AT5G63840.1 | Symbols: RSW3, PSL5 | Glycosyl hydrolases family 31 protein | chr5:25545056-25549199 FORWARD LENGTH=3043 Length=3043 Score = 490 bits (265), Expect = 5e-138 Identities = 299/315 (95%), Gaps = 4/315 (1%) Strand=Plus/Plus Query 1 AGGAGATGCAAAAGAATTTGGCAGGAAAAGGGTAGGAAGATGGTGACCATTGTGGATCCT 60 |||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||| Sbjct 1259 AGGAGATGCAAAAGAAATTGGC-TGCAAAGGGTAGGAAGATGGTGACCATTGTGGATCCT 1317 Query 61 CATATCAAGAGGGATGACTCATACTTCTTACACAAGGAGGCTACTCGGATGGGATACTAT 120 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct 1318 CATATCAAGAGGGATGACTCATACTTCTTACACAAAGAGGCTACTCAGATGGGATACTAT 1377 Query 121 GTTAAGGATTCATCTGGAAAAGACTTTGATGGTTGGTGCTGGCCTGGTTCATCATCATAC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1378 GTTAAGGATTCATCTGGAAAAGACTTTGATGGTTGGTGCTGGCCTGGTTCATCATCTTAC 1437 Query 181 ATTGATATGTTGAGCCCACAGATTAGAAAATGGTGGGGTGGTAGGTTCTCATATAAGAAC 240 |||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct 1438 ATTGATATGTTGAGCCCAGAGATTAGAAAATGGTGGGGTGGGAGGTTCTCGTATAAGAAC 1497 Query 241 TATGTTGGGTCAACTCCAT--T-GTATACCTGGAATGACATGAATGAGCCTTCCGTATTC 297 |||||||| |||||||||| | ||| |||||||||||||||||||||||||| |||||| Sbjct 1498 TATGTTGGTTCAACTCCATCATTGTACACCTGGAATGACATGAATGAGCCTTCTGTATTC 1557 Query 298 AATGGTCCCGAGGTT 312 ||||||||||||||| Sbjct 1558 AATGGTCCCGAGGTT 1572 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21715667568 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5