BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg894303
Length=1560
Score E
Sequences producing significant alignments: (Bits) Value
AT5G24150.1 | Symbols: SQP1, SQE5 | FAD/NAD(P)-binding oxidored... 2353 0.0
AT5G24160.1 | Symbols: SQE6 | squalene monoxygenase 6 | chr5:81... 1794 0.0
AT5G24140.1 | Symbols: SQP2 | squalene monooxygenase 2 | chr5:8... 503 2e-141
AT5G24155.1 | Symbols: | FAD/NAD(P)-binding oxidoreductase fam... 353 2e-96
> AT5G24150.1 | Symbols: SQP1, SQE5 | FAD/NAD(P)-binding oxidoreductase
family protein | chr5:8172332-8175431 REVERSE LENGTH=1849
Length=1849
Score = 2353 bits (1274), Expect = 0.0
Identities = 1470/1564 (94%), Gaps = 15/1564 (1%)
Strand=Plus/Plus
Query 3 GGATGTGGCTTTTAC-ACACGTTTGTGTATGGACGCTACTCGCCTTCGTGCTGACTTGGA 61
|||| |||| ||||| | ||||||| |||||||||||||||||||| ||||||||||||
Sbjct 33 GGATATGGCCTTTACGA-ACGTTTGCCTATGGACGCTACTCGCCTTCATGCTGACTTGGA 91
Query 62 C-GCTGTTCTACGACACAAACAGGGGGAAGAAGGCGACGAAGTTGGCGGATGCGGTGGTG 120
| | ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 92 CAG-TGTTCTACGTCACAAACAGGGGGAAGAAGGCGACGCAGTTGGCGGATGCGGTGGTT 150
Query 121 GACGAGCGAAAAGATGGTGCTGCTGCTGACGTTATCATCGTTGGGGCTGGAGTTGGCGGC 180
|| |||||| |||| | | |||| |||||||||||||||||||||||||||| ||||||
Sbjct 151 GAAGAGCGAGAAGA-CG-G-TGCTACTGACGTTATCATCGTTGGGGCTGGAGTAGGCGGC 207
Query 181 TCGGCTCTCGCATATGCTCTTGCTAAGGACGGGCGTCGAGTACATATAATAGAGAGGGAC 240
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 208 TCGGCTCTCGCATATGCTCTTGCTAAGGACGGGCGTCGAGTCCATGTAATAGAGAGGGAC 267
Query 241 ATGAGAGAACCAGAGAGAATGATGGGTGAGTTTATGCAACCAGGAGGACGATTCATGCTC 300
||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 268 CTGAGAGAACCAGAGAGAATCATGGGTGAGTTTATGCAACCAGGAGGACGACTCATGCTC 327
Query 301 TCTAAGCTTGGCCTTCAAGATTGTTTGGAAGGAATAGATGCCCAAAAAGCCACGGGCATG 360
||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 328 TCTAAGCTTGGTCTTGAAGATTGTTTGGAGGGAATAGATGCCCAAAAAGCCACGGGCATG 387
Query 361 GCAGTTTATAAGGACGGAAAAGAAGCAGTCGCATCTTTTCCGGTGGACAACAACAATTTT 420
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 388 ACAGTTTATAAGGACGGAAAAGAAGCAGTCGCATCTTTTCCCGTGGACAACAACAATTTT 447
Query 421 CCTTTTGATCCTTCTGCTCGATCTTTTCACAATGGCCGATTCGTCCAACG-TCTGCGCCA 479
|||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| ||
Sbjct 448 CCTTTTGATCCTTCGGCTCGATCTTTTCACAATGGCCGATTCGTCCAACGAT-TGCGGCA 506
Query 480 AAAAGCTTCTTCTCTTCCCAATGTGCGGCTCGAAGAAGGAACGGTGAGGTCTTTGATAGA 539
||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||
Sbjct 507 AAAGGCTTCTTCTCTTCCCAATGTGCGCCTGGAAGAAGGAACGGTGAAGTCTTTGATAGA 566
Query 540 AGAAAAAGGAGTGATCAAAGGAGTGACATACAAAAATAGCGCAGGCGAAGAAACAACAGC 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 567 AGAAAAAGGAGTGATCAAAGGAGTGACATACAAAAATAGCGCAGGCGAAGAAACAACAGC 626
Query 600 CTTTGCACCTCTCACTGTGGTATGCGACGGTTGCTACTCAAACCTTCGTCGGTCTCTTAA 659
||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 627 CTTGGCACCTCTCACTGTAGTATGCGACGGTTGCTACTCAAACCTTCGCCGGTCTCTTAA 686
Query 660 CGACAACAATGCGGAGGTTCTGTCATACCAAGTTGGTTACATCTC-AAGAAACTGTCAGC 718
||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||
Sbjct 687 TGACAACAATGCGGAGGTTCTGTCATACCAAGTTGGTTTTATCTCAAAG-AACTGTCAGC 745
Query 719 TTGAAGAACCGGAAAAGTTAAAATTGATAATGTCTAAACCCTCCTTCACCATGTTGTATC 778
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 746 TTGAAGAACCCGAAAAGTTAAAGTTGATAATGTCTAAACCCTCCTTCACCATGTTGTATC 805
Query 779 AAATCAGCAGCACCGACGTTCGTTGTGTTTTTG-AGCTTTTCCCCAACAACATTCCTTCT 837
||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct 806 AAATCAGCAGCACCGACGTTCGTTGTGTTTTTGAAG-TTCTCCCCAACAACATTCCTTCT 864
Query 838 ATTTCAAATGGTGAAATGGTTAATTTCGTGAAGAACATTATTGCTCCTCAGGTACCTTCA 897
||||||||||||||||||| || |||||||||||||| |||||||||||||||||||| |
Sbjct 865 ATTTCAAATGGTGAAATGGCTACTTTCGTGAAGAACACTATTGCTCCTCAGGTACCTTTA 924
Query 898 AAACTCCGTAAAATATTTTTGAAAGGGATCGATGAAGGAGCACATATAAAAGTCATGCCA 957
|||||||| |||||||||||||||||||| |||||||||| ||||||||||| |||||||
Sbjct 925 AAACTCCGCAAAATATTTTTGAAAGGGATTGATGAAGGAGAACATATAAAAGCCATGCCA 984
Query 958 ACAAAGAAAATGTCAGCTACTTTGAGCGATAAGAAAGGAGTGATTGTATTGGGAGATGCA 1017
|||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 985 ACAAAGAAGATGACAGCTACTTTGAGCGAGAAGAAAGGAGTGATTTTATTGGGAGATGCA 1044
Query 1018 TTCAACATGCGTCATCCAGCAATCGCATCTGGAATGATGGTTTTATTATCTGACATTCTC 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1045 TTCAACATGCGTCATCCAGCAATCGCATCTGGAATGATGGTTTTATTATCTGACATTCTC 1104
Query 1078 ATTCTACGCCGCCTTCTCCAGCCATTAAGCAACCTCGGCGATGCACAAAAAGTCACAGAA 1137
||||||||||| ||||||||||||||||||||||| ||| |||| |||||| || || ||
Sbjct 1105 ATTCTACGCCGTCTTCTCCAGCCATTAAGCAACCTTGGCAATGCGCAAAAAATCTCACAA 1164
Query 1138 GTTATCAAGTCCTTTTATGATATCCGCAAGCCAATGTCAGCGACAGTTAACACATTAGGA 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1165 GTTATCAAGTCCTTTTATGATATCCGCAAGCCAATGTCAGCGACAGTTAACACGTTAGGA 1224
Query 1198 AATGCATTTTCTCAAGTGCTAATTGCATCAACGGACAAAGCAAAAGAAGCAATGAGACAG 1257
|||||||| |||||||||||| ||||||| |||||| |||||||||| |||||||||||
Sbjct 1225 AATGCATTCTCTCAAGTGCTAGTTGCATCGACGGACGAAGCAAAAGAGGCAATGAGACAA 1284
Query 1258 GGTTGCTATGATTACCTCTGTAGTGGTGGTTTTCGCACGTCAGGGATGATGGCTCTGCTC 1317
||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||
Sbjct 1285 GGTTGCTATGATTACCTCTCTAGTGGTGGGTTTCGCACGTCAGGGATGATGGCTTTGCTA 1344
Query 1318 GGCGGCATGAACCCTCGTCCGATCTCTCTCATCTATCATCTATGTGCTATCACTCTATCC 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1345 GGCGGCATGAACCCTCGTCCGATCTCTCTCATCTATCATCTATGTGCTATCACTCTATCC 1404
Query 1378 TCCATTGGCCATTTGCTCTCTCCATTTCCCTCTCCCCTT-GACATCTGGCATAGCCTCCG 1436
|||||||||||| | |||||||||||||||||||||||| | ||| ||||||||||| ||
Sbjct 1405 TCCATTGGCCATCTACTCTCTCCATTTCCCTCTCCCCTTCG-CATTTGGCATAGCCTTCG 1463
Query 1437 ACTTTTTGGTTTAGCTACGAAAATGTTGGTTCCCCATCTAAAGGCTGAAGGAGTTAGCCA 1496
|||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1464 ACTTTTTGGTTTGGCTATGAAAATGTTGGTTCCCCATCTCAAGGCTGAAGGAGTTAGCCA 1523
Query 1497 AATGTTGTTTCCAGTCAACGCAGCCGCGTATCGTAAAAGCTATATGGCCGCAACGGCTCT 1556
||||||||||||||||||||| ||||||||| | |||||||||||||| |||||||||||
Sbjct 1524 AATGTTGTTTCCAGTCAACGCCGCCGCGTATAGCAAAAGCTATATGGCTGCAACGGCTCT 1583
Query 1557 CTAA 1560
||||
Sbjct 1584 CTAA 1587
> AT5G24160.1 | Symbols: SQE6 | squalene monoxygenase 6 | chr5:8183075-8186640
REVERSE LENGTH=1809
Length=1809
Score = 1794 bits (971), Expect = 0.0
Identities = 1375/1569 (88%), Gaps = 32/1569 (2%)
Strand=Plus/Plus
Query 8 TGGCTTTTACACACGTTTGTGTATGGACGCTACTCGCCTTCGTGCTGACTTGGACGCTGT 67
|||||||||| ||||||||| |||||||| || |||||||||||||||| |||||| |||
Sbjct 41 TGGCTTTTACGCACGTTTGTTTATGGACGTTAGTCGCCTTCGTGCTGACGTGGACGGTGT 100
Query 68 TCTACGACACAAACAGGGGGAAGAAGGCGACGAAGTTGGCGGATGCGGTGG-TGGACGAG 126
||||| || |||| | ||||||||||||| | ||||| ||| |||||| | || ||
Sbjct 101 TCTACCTTACCAACATGAAGAAGAAGGCGACGGATTTGGCTGATACGGTGGCT-GAGGAT 159
Query 127 CGAAAAGATGGTGCTGCTGCTGACGTTATCATCGTTGGGGCTGGAGTTGGCGGCTCGGCT 186
| |||||| | | |||||||||||| || ||||| |||||||| || || || ||||||
Sbjct 160 CAAAAAGA-CG-G-TGCTGCTGACGTCATTATCGTCGGGGCTGGTGTAGGTGGTTCGGCT 216
Query 187 CTCGCATATGCTCTTGCTAAGGACGGGCGTCGAGTACATATAATAGAGAGGGACATGAGA 246
||||||||||||||||||||||| ||||||||||||||| | || |||||||||||||||
Sbjct 217 CTCGCATATGCTCTTGCTAAGGATGGGCGTCGAGTACATGTGATCGAGAGGGACATGAGA 276
Query 247 GAACCAGAGAGAATGATGGGTGAGTTTATGCAACCAGGAGGACGATTCATGCTCTCTAAG 306
|||||||| |||||||||||||||||||||||||| || |||||| ||||||| |||||
Sbjct 277 GAACCAGAAAGAATGATGGGTGAGTTTATGCAACCTGGCGGACGACTCATGCTTTCTAAA 336
Query 307 CTTGGCCTTCAAGATTGTTTGGAAGGA-ATAGATGCCCAAAAAGCCACGGGCATGGCAGT 365
||||||||||||||||| |||||| || |||||||| || ||||||||||| |||||||
Sbjct 337 CTTGGCCTTCAAGATTGCTTGGAA-GACATAGATGCACAGAAAGCCACGGGTTTGGCAGT 395
Query 366 TTATAAGGACGGAAAAGAAGCAGTCGCATCTTTTCCGGTGGACAACAACAATTTTCCTTT 425
|||||| || ||||||||||||| |||| ||||||| ||||| |||||||||||| |||
Sbjct 396 TTATAAAGATGGAAAAGAAGCAGACGCACCTTTTCCAGTGGATAACAACAATTTTTCTTA 455
Query 426 TGATCCTTCTGCTCGATCTTTTCACAATGGCCGATTCGTCCAACGTCTGCGCCAAAAAGC 485
||| |||||||||||||||||||||||||||||||||||||||| ||||| | ||| ||
Sbjct 456 TGAACCTTCTGCTCGATCTTTTCACAATGGCCGATTCGTCCAACAACTGCGTCGAAAGGC 515
Query 486 TTCTTCTCTTCCCAATGTGCGGCTCGAAGAAGGAACGGTGAGGTCTTTGA-TAGAAGAAA 544
|| ||||||| |||||||||| || |||||||||||||||| |||||| | |||||||||
Sbjct 516 TTTTTCTCTTTCCAATGTGCGCCTGGAAGAAGGAACGGTGAAGTCTTT-ACTAGAAGAAA 574
Query 545 AAGGAGTGATCAAAGGAGTGACATACAAAAATAGCGCAGGCGAAGAAACAACAGCCTTTG 604
|||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||| |
Sbjct 575 AAGGAGTGGTCAAAGGAGTGACATACAAGAATAAAGAAGGCGAAGAAACAACAGCCTTGG 634
Query 605 CACCTCTCACTGTGGTATGCGACGGTTGCTACTCAAACCTTCGTCGGTCTCTTAACGA-- 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 635 CACCTCTCACTGTGGTATGCGACGGTTGCTACTCAAACCTTCGTCGGTCTCTTAATGATG 694
Query 663 -CAACAATGCGGAGGTTCTGTCATACCA-AGTTGGTTACATCTCAA-GAAACTGTCAGCT 719
||||||||| ||| || |||| ||| | ||||||||||||||||| ||| |||| |||
Sbjct 695 ACAACAATGCTGAGATTATGTCGTAC-ATAGTTGGTTACATCTCAAAGAAT-TGTCGGCT 752
Query 720 TGAAGAACCGGAAAAGTTAAAATTGATAATGTCTAAACCCTCCTTCACCATGTTGTATCA 779
||||||||| |||||| || | |||||| |||||||||| || ||||||||| | || ||
Sbjct 753 TGAAGAACCCGAAAAGCTACACTTGATATTGTCTAAACCATCTTTCACCATGGTATACCA 812
Query 780 AATCAGCAGCACCGACGTTCGTTGTGTTTTTGAGCTTTTCCCC-AACAACATTCCTTCTA 838
||| |||||||| ||||||||||||| ||||||| || ||||| || || |||||||||
Sbjct 813 AATAAGCAGCACTGACGTTCGTTGTGGTTTTGAGGTTCTCCCCGAA-AATTTTCCTTCTA 871
Query 839 TTTCAAATGGTGAAATGGT-TAATTTCGTGAAGAACATTATTGCTCCTCAGGTACCTTCA 897
|| |||||||||||||| | || |||| ||||||| | ||| | ||||||||||||| ||
Sbjct 872 TTGCAAATGGTGAAATG-TCTACTTTCATGAAGAATACTATAGTTCCTCAGGTACCTCCA 930
Query 898 AAACTCCGTAAAATATTTTTGAAAGGGATCGATGAAGGAGCACATATAAAAGTCATGCCA 957
|||||||| ||||||||||||||||| || ||||| |||||||| |||||||| ||||
Sbjct 931 AAACTCCGCAAAATATTTTTGAAAGGTATAGATGAGGGAGCACACATAAAAGTGGTGCCG 990
Query 958 ACAAAGAAAATGTCAGCTACTTTGAGCGATAAGAAAGGAGTGATTGTATTGGGAGATGCA 1017
||||| ||| || ||||||| ||| | |||||||| |||||||||||||||||||||
Sbjct 991 GCAAAGCGCATGACATCTACTTTAAGCAAGAAGAAAGGTGTGATTGTATTGGGAGATGCA 1050
Query 1018 TTCAACATGCGTCATCCAGCAATCGCATCTGGAATGATGGTTTTATTATCTGACATTCTC 1077
||||| ||||||||||||| | ||||||||||||||||||||| | || |||||||||
Sbjct 1051 TTCAATATGCGTCATCCAGTTGTTGCATCTGGAATGATGGTTTTACTGTCGGACATTCTC 1110
Query 1078 ATTCTACGCCGCCTTCTCCAGCCATTAAGCAACCTCGGCGATGCACAA-AAAGTCACAGA 1136
||||||||||| ||||| ||||||||||||||||||||||||||| || |||||| ||||
Sbjct 1111 ATTCTACGCCGTCTTCTTCAGCCATTAAGCAACCTCGGCGATGCA-AACAAAGTCTCAGA 1169
Query 1137 AGTTATCAAGTCCTTTTATGATATCCGCAAGCCAATGTCAGCGACAGTTAACACATTAGG 1196
||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct 1170 AGTTATCAATTCCTTTTATGATATCCGCAAGCCAATGTCGGCGACGGTTAACACATTGGG 1229
Query 1197 AAATGCATTTTCTCAAGTGCTAATTGCATCAACGGACAAAGCAAAAGAAGCAATGAGACA 1256
|||||||||||||||||| ||||||| ||||||||| |||||||||| |||||||||||
Sbjct 1230 AAATGCATTTTCTCAAGTACTAATTGGATCAACGGATGAAGCAAAAGAGGCAATGAGACA 1289
Query 1257 GGGT-TGCTATGATTACCTCTGTAGTGGTGGTTTTCGCACGTCAGGGATGATGGCTCTGC 1315
|||| | |||||||||||| |||||||| || ||||| ||||||||||||||||||||||
Sbjct 1290 GGGTGT-CTATGATTACCTTTGTAGTGGCGGGTTTCGTACGTCAGGGATGATGGCTCTGC 1348
Query 1316 TCGGCGGCATGAACCCTCGTCCGATCTCTCTCATCTATCATCTATGTGCTATCACTCTAT 1375
||||||||||||| |||||||| |||||||| |||||||||| ||||| ||||||||||
Sbjct 1349 TCGGCGGCATGAATCCTCGTCCTCTCTCTCTCGTCTATCATCTTTGTGCCATCACTCTAT 1408
Query 1376 CCTCCATTGGCCATTTGCTCTCTCCATTTCCCTCTCCCCTT-GACATCTGGCATAGCCTC 1434
||||||||||||| |||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct 1409 CCTCCATTGGCCAACTGCTCTCTCCATTTCCCTCTCCCCTTCG-CATTTGGCATAGCCTC 1467
Query 1435 C-GACTTTTTGGTTTAGCTACGAAAATGTTGGTTCCCCATCT-AAAGGCTGAAGGAGTTA 1492
| ||||||||||| || | |||||||||||||||| |||| |||| ||||||||||||
Sbjct 1468 AAG-CTTTTTGGTTTGGCCATGAAAATGTTGGTTCCCAATCTCAAAG-CTGAAGGAGTTA 1525
Query 1493 GCCAAATGTTGTTTCCAGTCAAC-GCAGCCGCGTATCGTAAAAGCTATATGGCCGCAACG 1551
|||||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||
Sbjct 1526 GCCAAATGTTGTTTCCAG-CAAATGCAGCCGCGTATCACAAAAGCTATATGGCTGCAACC 1584
Query 1552 GCTCTCTAA 1560
||||||||
Sbjct 1585 ACTCTCTAA 1593
> AT5G24140.1 | Symbols: SQP2 | squalene monooxygenase 2 | chr5:8164347-8167673
REVERSE LENGTH=1755
Length=1755
Score = 503 bits (272), Expect = 2e-141
Identities = 1099/1483 (74%), Gaps = 117/1483 (8%)
Strand=Plus/Plus
Query 128 GAAAAGATGGTGCTGCTGCTGACGTTATCATCGTTGGGGCTGGAGTTGGC-GGCTCGGCT 186
||| ||||||||| | | || || ||||| |||||||| || ||| || ||| | ||
Sbjct 120 GAAGAGATGGTGCAAC-G--GATGTCATCATTGTTGGGGCGGGTGTT-GCAGGCGCTTCT 175
Query 187 CTCGCATATGCTCTT-GCTAAGGACGGGCGTCGAGTACATATAATAGAGAGGGACATGAG 245
|| || |||||| || |||||||| || || ||||||||| | |||||||||||| | |
Sbjct 176 CTTGCTTATGCT-TTAGCTAAGGATGGACGACGAGTACATGTGATAGAGAGGGACTTAAA 234
Query 246 AGAACCAGAGAGAATGATGGGTGAGTTTATGCAACCAGGAGGACGATTCATGCTCTCTAA 305
||| ||| | ||| | ||||| ||| | |||||| | ||||| || |||||| | | |
Sbjct 235 AGAGCCACAAAGATTCATGGGAGAGCTGATGCAAGCGGGAGGTCGCTTCATGTTAGCCCA 294
Query 306 GCTTGGCCTTC-AAGATTGTTTGGAAGGA-ATAGATGCCCAAAAAGCCACGGGCATGGCA 363
|||||||| || |||||||||||| |||| ||||| || ||| |||| | | | |||||
Sbjct 295 GCTTGGCC-TCGAAGATTGTTTGG-AGGACATAGACGCACAAGAAGCGAAGTCCTTGGCA 352
Query 364 GTTTATAAGGACGGAAAAGAAGC-A-GTCGCATCTTTTCCGGTGGACAACAACAATTTTC 421
| || ||||| |||||| | || | | || ||||||| || |||| | |||||
Sbjct 353 ATATACAAGGATGGAAAACACGCGACATTGC--CTTTTCC---AGATGACAAGAGTTTTC 407
Query 422 CTTTTGATCCTTCT-GCTCGATCT-TTTCACAATGGCCGATTCGTCCAACGTCTGCGCCA 479
|| ||| || | | | || || || | ||||| || | || |||||| | |||||
Sbjct 408 CTCATGAGCC-AGTAGGTAGA-CTCTTACGTAATGGTCGGCTGGTACAACGTTTACGCCA 465
Query 480 AAAAGCTTCTTCTCTTCCCAATGTGCGGCTCGAAGAAGGAACGGTGAGGTCTTTGATAGA 539
|||||| |||||||| |||||| | | ||||||||||| |||| |||||| || ||
Sbjct 466 AAAAGCAGCTTCTCTTAGCAATGTTCAATTAGAAGAAGGAACAGTGAAGTCTTTAATTGA 525
Query 540 AGAAAAAGGAGTGATCAAAGGAGTGACATACAAAAATAGCGCAGGCGAAGAAACAACAGC 599
|||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 526 AGAAGAAGGAGTGGTCAAAGGAGTGACATACAAAAATAGCGCAGGCGAAGAAATAACGGC 585
Query 600 CTTTGCACCTCTCACTGTGGTATGCGACGGTTGCTACTCAAACCTTCGTCGGTCTCTTAA 659
|||||||||||| ||||| |||||||| ||||| || || |||||||||||||| ||
Sbjct 586 CTTTGCACCTCTTACTGTCGTATGCGATGGTTGTTATTCGAACCTTCGTCGGTCACTCGT 645
Query 660 CGACAACAATGCGGAGGTTCTGTCATACCAAGTTGG-TTACATCTC-AAGAA-A-CTGTC 715
|| || | || ||| || || || ||| | | ||| |||| || | ||||| | | |
Sbjct 646 GGATAATACTGAGGAAGTCCTCTCGTAC-ATGGTGGGTTACGTCACGAAGAATAGCCG-- 702
Query 716 AGCTTGAAGAACCGGAAAAGT-TAAAATTGATAATGTCTAAACCCTCC-TTCACCATGTT 773
| |||||||| || | | || || | |||||| | |||||||| | || ||||
Sbjct 703 A-CTTGAAGATCCCCATA-GTCTACATTTGATATTTTCTAAACCTTTGGTTTG---TGTT 757
Query 774 GTAT--CAAATCAGCAGC-ACCGACGTTCGTTGTGTTTTTGA-GCTTTTCCC-CA-ACAA 827
||| ||||| | ||| | || |||||||||||| || | || ||| | | |
Sbjct 758 ATATATCAAATAACCAGTGAT-GAAGTTCGTTGTGTTGCCGAAG-TT--CCCGCTGATAG 813
Query 828 CATTCCTTCTATTTCAAATGGTGAAATGGT-TAATTTCGTGAAGAACATTATTG-CTCCT 885
||||||||||| || |||||||||||| | || ||| | ||||| || | || |||||
Sbjct 814 TATTCCTTCTATATCGAATGGTGAAATG-TCTACCTTCCTCAAGAA-ATCAATGGCTCCT 871
Query 886 CAGGTACCTTCAA----AACTC--CGTAAAATATTTTTGAAAGGGATCGATGAAGGAGCA 939
||| ||||| || || || || | |||||||||||||| || || |||||| |
Sbjct 872 CAGATACCTGAAACTGGAAATCTTCGGGAGATATTTTTGAAAGGCATAGAGGAAGGATTA 931
Query 940 C-ATA--TAAAAGTCATGCCAACAAAGAAAA-T--GTCAGCTACTTTGAGCGATAAGAA- 992
| | | ||||| ||| | | | | ||||| | |||| | | ||| | ||||| ||
Sbjct 932 CCAGAGATAAAA-TCAA-C-AGCGACGAAAAGTATGTCATCGAGATTGTGTGATAA-AAG 987
Query 993 AGGAGTGATTGTATTGGGAGATGCATTCAACATGCGTCATCC-AGCAATCGCATCTGGAA 1051
|||||||||||| ||||||||||||||||| ||||||||||| | |||||| || ||||
Sbjct 988 AGGAGTGATTGTGTTGGGAGATGCATTCAATATGCGTCATCCTAT-AATCGCGTCAGGAA 1046
Query 1052 TGATGGTTTTATTATCTGACATTCT-CATTCTACGCCGCCTTCTCCAGCCATTAAGC--A 1108
|||||||| | | || |||||| | |||||||||| |||||| | ||||| || |
Sbjct 1047 TGATGGTTGCACTCTCGGACATT-TGCATTCTACGCAATCTTCTCAAACCATT--GCCTA 1103
Query 1109 ACCTCGGCGATGCACAA-AAAGTCACAGAAGTTATCAAGTCCTTTTATGAT-ATCCGCAA 1166
||||| || || | || |||||| | || || ||||||||||||| || ||||||||
Sbjct 1104 ACCTCAGCAATACT-AAGAAAGTCTCTGATCTTGTCAAGTCCTTTTAC-ATCATCCGCAA 1161
Query 1167 GCCAATGTCAGCGACAGTTAACACATTAG-GAA-ATGCATTTTCTCAAGTGCTAATTGC- 1223
||||||||||||||| || ||||| | | || || | ||||| |||||||| ||||
Sbjct 1162 GCCAATGTCAGCGACCGTGAACACGCTCGCGAGTAT-C-TTTTCACAAGTGCTTGTTGCT 1219
Query 1224 ATCAACGGACAAAGCAAAAGAAGCAATGAGACAGGGTTGCTATGA-TTACCTCTG-TAGT 1281
| |||| ||| |||||| ||| | |||| |||| || |||| | | |||||| | | ||
Sbjct 1220 A-CAACAGACGAAGCAAGAGAGGGAATGCGACAAGGCTGCT-TCAATTACCTA-GCTCGT 1276
Query 1282 GGTGGTTTTCGCACGTCAGGG-AT-GATGGCTCTGCTCGGCGGCATGAACCCTCGTCCGA 1339
|| | |||| || |||| || |||| || | ||||| ||||||||||||| ||
Sbjct 1277 GGAGATTTTAAAACA--AGGGGATTGATGACTATTCTCGGAGGCATGAACCCTCACCC-- 1332
Query 1340 TCT--CTCTCA-TC-TATCATCTATGT-GCTATCACTCTATCC-TCCATTGGCCATTTGC 1393
||| |||| | || | |||||| ||| || ||||| || | | ||||| ||||| ||||
Sbjct 1333 TCTTACTCT-AGTCCT-TCATCT-TGTAGCCATCACCCT-TACGTCCATGGGCCACTTGC 1388
Query 1394 TCTCTCCATTTCCCTCTCCCCTT-GACATCTGGCATAGCCTCCGACTTTTTGGTTTAGCT 1452
||||||| ||||| || || | | | | | |||||||||||| || || ||| | |||
Sbjct 1389 TCTCTCCGTTTCCTTCGCCTCGTCG-CTTTTGGCATAGCCTCAGAATTCTTGCCTGGGCT 1447
Query 1453 ACGAAAATGTTGGTTCCCCATCTAAAGGCTGAAGGAGTT-A-GCCAAATGTTGTTTCCAG 1510
| ||||||||| | | ||| || || ||||||| || | | |||||||| |||||
Sbjct 1448 TTGCAAATGTTGGGTGCACATTTAGTGGATGAAGGA-TTCAAGG-AAATGTTGATTCCAA 1505
Query 1511 TCAA-CGCAGCCGCGTATCGTAA--AAGCTATATGGCCGCAAC 1550
||| |||||| || ||||| || || |||||| ||| ||||
Sbjct 1506 -CAAACGCAGCTGCTTATCG-AAGGAA-CTATATCGCCACAAC 1545
> AT5G24155.1 | Symbols: | FAD/NAD(P)-binding oxidoreductase family
protein | chr5:8180118-8181027 REVERSE LENGTH=377
Length=377
Score = 353 bits (191), Expect = 2e-96
Identities = 278/320 (87%), Gaps = 5/320 (2%)
Strand=Plus/Plus
Query 1 ATGGATGTGGCTTTTACACACGTTTGTGTATGGACGCTACTCGCCTTCGTGCTGACTTGG 60
|||||| |||| ||||| ||||||||| |||||||||||||||||||||||||||| |||
Sbjct 12 ATGGATATGGCCTTTACGCACGTTTGTCTATGGACGCTACTCGCCTTCGTGCTGACCTGG 71
Query 61 ACGCTGTTCTACGACACAAACAGGGGGAAGAAGGCGAC-GAAGTTGGCGGATGCGGTGGT 119
||| ||||||||| || |||||| |||||||||| | ||| ||||| ||||||| |
Sbjct 72 ACGGTGTTCTACGTTACCAACAGGAAGAAGAAGGCGCCGGAA-TTGGCAGATGCGGCAGC 130
Query 120 GGACGAGCGAAAAGATGGTGCTGCTGCTGACGTTATCATCGTTGGGGCTGGAGTTGGCGG 179
|| ||| ||| ||| | ||||||||| ||||||||||| ||||||||||| || ||
Sbjct 131 AGAGGAGAGAAGAGA--CAG-TGCTGCTGATGTTATCATCGTCGGGGCTGGAGTAGGTGG 187
Query 180 CTCGGCTCTCGCATATGCTCTTGCTAAGGACGGGCGTCGAGTACATATAATAGAGAGGGA 239
|||||||||||||||| ||||||||||||||||||| ||||||| | |||||||||||
Sbjct 188 CTCGGCTCTCGCATATTCTCTTGCTAAGGACGGGCGCCGAGTACTTGCGATAGAGAGGGA 247
Query 240 CATGAGAGAACCAGAGAGAATGATGGGTGAGTTTATGCAACCAGGAGGACGATTCATGCT 299
|||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 248 TATGAGAGAACCAGAGAGAATGATGGGTGAGTTTATGCAGCCAGGAGGACGACTCATGCT 307
Query 300 CTCTAAGCTTGGCCTTCAAG 319
||||||||||||||| |||
Sbjct 308 TTCTAAGCTTGGCCTTGAAG 327
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77007636030
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5