BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg894337
Length=1152
Score E
Sequences producing significant alignments: (Bits) Value
AT5G20620.1 | Symbols: UBQ4 | ubiquitin 4 | chr5:6973071-697494... 1327 0.0
AT5G03240.1 | Symbols: UBQ3 | polyubiquitin 3 | chr5:771752-773... 1064 0.0
AT1G65350.1 | Symbols: UBQ13 | ubiquitin 13 | chr1:24272518-242... 996 0.0
AT5G37640.1 | Symbols: UBQ9 | ubiquitin 9 | chr5:14952782-14953... 728 0.0
AT1G55060.1 | Symbols: UBQ12 | ubiquitin 12 | chr1:20549533-205... 492 4e-138
> AT5G20620.1 | Symbols: UBQ4 | ubiquitin 4 | chr5:6973071-6974946
REVERSE LENGTH=1491
Length=1491
Score = 1327 bits (718), Expect = 0.0
Identities = 1019/1163 (88%), Gaps = 26/1163 (2%)
Strand=Plus/Plus
Query 3 GATGCAAATTTTTGTGAAAACACTCACTGGCAAGACCATTACTCTCGAGGTTGAGAGCTC 62
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 98 GATGCAAATTTTCGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTC 157
Query 63 TGACACCATTGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGGATTCCT-CTAGACC 121
||||||||| |||||||||||||||||||| |||||||||||||| |||||| || ||||
Sbjct 158 TGACACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCT-GACC 216
Query 122 AGCAAAGATTGATCTTCGCCGGAAAACAGCTCGAAGATGGCCGTACTTTGGCCGATTACA 181
||||||||||||||||||| || || ||||| ||||||||||| || ||||| |||||||
Sbjct 217 AGCAAAGATTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGCACCTTGGCTGATTACA 276
Query 182 ACATCCAGAAAGAATCAACTCTCCACTTGGTTCTTC-GTTTAAGAGGTGGTATGCAGATC 240
||||||||||||||||||| ||||||||||||| || | |||||||||||||||||||||
Sbjct 277 ACATCCAGAAAGAATCAACACTCCACTTGGTTC-TCAGGTTAAGAGGTGGTATGCAGATC 335
Query 241 TTTGTGAAGACTTTGACTGGCAAAACAATCA-CTCTCGAGGTTGAGAGTTCAGACACTAT 299
||||| |||||| ||||||||||||| || | || | |||||||| || || ||||||||
Sbjct 336 TTTGTCAAGACTCTGACTGGCAAAACCATTACCT-TGGAGGTTGAAAGCTCTGACACTAT 394
Query 300 TGACAATGTTAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAGCAGAGACT 359
|||||| || || || |||||||| || || || |||||||| ||||||||||| |||||
Sbjct 395 TGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAGCAAAGACT 454
Query 360 TATCTTCGCTGGGAAACAGCTTGAAGATGGTCGTACACTCGCTGACTACAATATCCAGAA 419
||| |||||||| || |||||||||||||| | || || ||||||||||||||||| ||
Sbjct 455 TATTTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCTGACTACAATATCCA-AA 513
Query 420 A-GAGTCTACCCTCCA-TTTGGTGCTTCGTCTCAGAGGTGGTATGCAGAT-TTTCGTGAA 476
| |||||||| || || || || ||||||||| | ||||||||||| || ||| |||||
Sbjct 514 AGGAGTCTACTCTTCACCTT-GTCCTTCGTCTCCGTGGTGGTATGCAAATCTTT-GTGAA 571
Query 477 GACCCTTACCGGCAAGACCATCA-CTTTGGAGGTTGAGAGCTCAGACACGATTGATAATG 535
||| || || || || || |||| | || |||||||||||||||||||| ||||| ||||
Sbjct 572 GACTCTGACGGGTAAAACAATCACCCTT-GAGGTTGAGAGCTCAGACACCATTGACAATG 630
Query 536 TCAAGGCTAAGATTCAAGACAAGGAAGGG-ATCCCACCGGACCAGCAGAGACTTATCTTC 594
|||| |||||||| ||||| || | |||| |||||||||||||||||||| ||||||||
Sbjct 631 TCAAAGCTAAGATCCAAGATAAAG-AGGGAATCCCACCGGACCAGCAGAGGCTTATCTTT 689
Query 595 GCTGGGAAACAGCTTGAGGATGGTCGGACACTTGCGGATTACAACATCCAAAAAGAGTCT 654
|| || || ||||| ||||||||||| || ||||| |||||||||||||||||||||||
Sbjct 690 GCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAACATCCAAAAAGAGTCA 749
Query 655 ACACTCCATCTT-GTGCTTCGTCTCCGTGGTGGTATGCAAATCTTTGTGAAGACCCTT-A 712
|| || ||| || ||||||||||| | ||||||||||| || |||||||||| |||| |
Sbjct 750 ACCCTTCAT-TTGGTGCTTCGTCTGAGAGGTGGTATGCAGATTTTTGTGAAGA-CCTTAA 807
Query 713 CCGGAAAAACCATTACTCTGGAGGTTGAGAGCTCAGACACAATCGATAATGTCAAGGCTA 772
| || || || || ||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 808 CTGGCAAGACTATCACTTTGGAGGTTGAGAGCTCAGACACAATCGATAATGTCAAGGCAA 867
Query 773 AGATTCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGACTCATCTTCGCTGGTAAAC 832
||||||| |||||||||||||| ||||||||||||||||||||||| || ||||| ||||
Sbjct 868 AGATTCAAGACAAGGAAGGGATTCCACCAGATCAGCAGAGACTCATATTTGCTGGAAAAC 927
Query 833 AGCTTGAGGATGGTCGGACTCTTGCGGATTACAATATTCAGAAGGAATCAACCCTTCACC 892
||||||| ||||| || || || || |||||||| || || ||||| || ||||| || |
Sbjct 928 AGCTTGAAGATGGACGCACACTCGCTGATTACAACATCCAAAAGGAGTCTACCCTCCATC 987
Query 893 TTGTG-TTGCGTCTTCGTGGTGGCATGCAAATCTTTGTGAAGA-CTTTGACAGGCAAGAC 950
||||| || ||||| |||||||| ||||| || |||||||||| | || || || || ||
Sbjct 988 TTGTGCTT-CGTCTCCGTGGTGGTATGCAGATATTTGTGAAGACCCTT-ACCGGAAAAAC 1045
Query 951 TATTACT-TTGGAGGTTGAGAGCTCAGACACTATTGATAACGTCAAGGCCAAGATTCAGG 1009
|||||| || |||||||||||||||||||| |||||||| |||||||| ||||||||||
Sbjct 1046 CATTACTCTT-GAGGTTGAGAGCTCAGACACAATTGATAATGTCAAGGCTAAGATTCAGG 1104
Query 1010 ACAAGGAAGGGATCCCTCCGGACCAACAGAGACTCATCTTCGCTGGGAAACAGCTTGAGG 1069
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1105 ACAAGGAAGGGATCCCACCGGACCAACAGAGACTCATCTTCGCTGGGAAGCAGCTTGAGG 1164
Query 1070 ATGGTCGGACTCTTGCAGATTACAACATCCAGAAGGAGTCGACTCTTCATTTGGTTCTTC 1129
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1165 ATGGTCGGACTCTTGCAGATTACAACATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTC 1224
Query 1130 GTCTTCGTGGTGGAAGCTTCTGA 1152
|||||||||||||||||||||||
Sbjct 1225 GTCTTCGTGGTGGAAGCTTCTGA 1247
Score = 1057 bits (572), Expect = 0.0
Identities = 806/919 (88%), Gaps = 16/919 (2%)
Strand=Plus/Plus
Query 4 ATGCAAATTTTTGTGAAAACACTCACTGGCAAGACCATTA-CTCTCGAGGTTGAGAGCTC 62
||||| || ||||| || || || |||||||| ||||||| || | |||||||| |||||
Sbjct 327 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAAACCATTACCT-TGGAGGTTGAAAGCTC 385
Query 63 TGACACCATTGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGGATTCCTCTAGACCA 122
|||||| |||||||| || ||||||||||| |||||||||||||| || |||| |||||
Sbjct 386 TGACACTATTGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCA 445
Query 123 GCAAAGA-TTGATCTTCGCCGGAAAACAGCTCGAAGATGGCCGTACT-TTGGCCGATTAC 180
||||||| || || ||||| || || ||||| |||||||| | ||| || || || |||
Sbjct 446 GCAAAGACTT-ATTTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTT-GCTGACTAC 503
Query 181 AACATCCAGAAA-GAATCAACTCTCCA-CTTGGTTCTTCGTTTAAGAGGTGGTATGCAGA 238
|| ||||| ||| || || ||||| || ||| || |||||| | | ||||||||||| |
Sbjct 504 AATATCCA-AAAGGAGTCTACTCTTCACCTT-GTCCTTCGTCTCCGTGGTGGTATGCAAA 561
Query 239 TCTTTGTGAAGACTTTGACTGGCAAAACAATCACTCTCGAGGTTGAGAGTTCAGACACTA 298
|||||||||||||| |||| || ||||||||||| || ||||||||||| |||||||| |
Sbjct 562 TCTTTGTGAAGACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCAGACACCA 621
Query 299 TTGACAATGTTAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAGCAGAGAC 358
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 622 TTGACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAGCAGAGGC 681
Query 359 TTATCTTCGCTGGGAAACAGCTTGAAGATGGTCGTACACTCGCTGACTACAATATCCAGA 418
||||||| || || || ||||| || |||||||| || || ||||| ||||| ||||| |
Sbjct 682 TTATCTTTGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAACATCCAAA 741
Query 419 AAGAGTCTACCCTCCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAGATTTTCGTGAAGA 478
||||||| ||||| ||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 742 AAGAGTCAACCCTTCATTTGGTGCTTCGTCTGAGAGGTGGTATGCAGATTTTTGTGAAGA 801
Query 479 CCCTTACC-GGCAAGACCATCACTTTGGAGGTTGAGAGCTCAGACACGATTGATAATGTC 537
|| ||| | |||||||| ||||||||||||||||||||||||||||| || |||||||||
Sbjct 802 CC-TTAACTGGCAAGACTATCACTTTGGAGGTTGAGAGCTCAGACACAATCGATAATGTC 860
Query 538 AAGGCTAAGATTCAAGACAAGGAAGGGATCCCACCGGACCAGCAGAGACTTATCTTCGCT 597
||||| ||||||||||||||||||||||| ||||| || ||||||||||| || || |||
Sbjct 861 AAGGCAAAGATTCAAGACAAGGAAGGGATTCCACCAGATCAGCAGAGACTCATATTTGCT 920
Query 598 GGGAAACAGCTTGAGGATGGTCGGACACTTGCGGATTACAACATCCAAAAAGAGTCTACA 657
|| ||||||||||| ||||| || ||||| || ||||||||||||||||| ||||||||
Sbjct 921 GGAAAACAGCTTGAAGATGGACGCACACTCGCTGATTACAACATCCAAAAGGAGTCTACC 980
Query 658 CTCCATCTTGTGCTTCGTCTCCGTGGTGGTATGCAAATCTTTGTGAAGACCCTTACCGGA 717
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 981 CTCCATCTTGTGCTTCGTCTCCGTGGTGGTATGCAGATATTTGTGAAGACCCTTACCGGA 1040
Query 718 AAAACCATTACTCTGGAGGTTGAGAGCTCAGACACAATCGATAATGTCAAGGCTAAGATT 777
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1041 AAAACCATTACTCTTGAGGTTGAGAGCTCAGACACAATTGATAATGTCAAGGCTAAGATT 1100
Query 778 CAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGACTCATCTTCGCTGGTAAACAGCTT 837
||||||||||||||||||||||| || || |||||||||||||||||||| || ||||||
Sbjct 1101 CAGGACAAGGAAGGGATCCCACCGGACCAACAGAGACTCATCTTCGCTGGGAAGCAGCTT 1160
Query 838 GAGGATGGTCGGACTCTTGCGGATTACAATATTCAGAAGGAATCAACCCTTCACCTTG-T 896
|||||||||||||||||||| |||||||| || |||||||| || || |||||| ||| |
Sbjct 1161 GAGGATGGTCGGACTCTTGCAGATTACAACATCCAGAAGGAGTCGACTCTTCAC-TTGGT 1219
Query 897 G-TTGCGTCTTCGTGGTGG 914
|| ||||||||||||||
Sbjct 1220 TCTT-CGTCTTCGTGGTGG 1237
Score = 813 bits (440), Expect = 0.0
Identities = 764/921 (83%), Gaps = 20/921 (2%)
Strand=Plus/Plus
Query 232 ATGCAGATCTTT-GTGAAGACTTTGACTGGCAAAACAATCACTCTCGAGGTTGAGAGTTC 290
||||| || ||| ||||| || | ||||| || || |||||||||||||||||||| ||
Sbjct 99 ATGCAAAT-TTTCGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTC 157
Query 291 AGACACTATTGACAATGTTAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCA 350
||||| || ||||||||||| || |||||||| || || || || || || || |||||
Sbjct 158 TGACACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCA 217
Query 351 GCAGAGACTT-ATCTTCGCTGGGAAACAGCTTGAAGATGGTCGTACAC-TCGCTGACTAC 408
||| ||| || ||||||||||| || ||||| |||||||| || || | | ||||| |||
Sbjct 218 GCAAAGA-TTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGCAC-CTTGGCTGATTAC 275
Query 409 AATATCCAGAAAGAGTCTACCCTCCATTTGGTGCTTC--GTCTCAGAGGTGGTATGCAGA 466
|| ||||||||||| || || ||||| ||||| | || || | ||||||||||||||||
Sbjct 276 AACATCCAGAAAGAATCAACACTCCACTTGGTTC-TCAGGT-TAAGAGGTGGTATGCAGA 333
Query 467 T-TTTCGTGAAGACCCTTACCGGCAAGACCATCACTTTGGAGGTTGAGAGCTCAGACACG 525
| ||| || ||||| || || ||||| ||||| || ||||||||||| ||||| |||||
Sbjct 334 TCTTT-GTCAAGACTCTGACTGGCAAAACCATTACCTTGGAGGTTGAAAGCTCTGACACT 392
Query 526 ATTGATAATGTCAAGGCTAAGATTCAAGACAAGGAAGGGATCCCACCGGACCAGCAGAGA 585
||||| || |||||||| ||||| || ||||||||||| ||||| ||||||||||| |||
Sbjct 393 ATTGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAGCAAAGA 452
Query 586 CTTATCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACACTTGCGGATTACAACATCCAA 645
||||| |||||||| || |||||||| ||||| |||| ||||| || ||||| ||||||
Sbjct 453 CTTATTTTCGCTGGTAAGCAGCTTGAAGATGGAAGGACTCTTGCTGACTACAATATCCAA 512
Query 646 AAAGAGTCTACACTCCATCTTGTGCTTCGTCTCCGTGGTGGTATGCAAATCTTTGTGAAG 705
|| |||||||| || || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 513 AAGGAGTCTACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTATGCAAATCTTTGTGAAG 572
Query 706 ACCCTTACCGGAAAAACCATTACTCTGGAGGTTGAGAGCTCAGACACAATCGATAATGTC 765
|| || || || ||||| || || || |||||||||||||||||||| || || ||||||
Sbjct 573 ACTCTGACGGGTAAAACAATCACCCTTGAGGTTGAGAGCTCAGACACCATTGACAATGTC 632
Query 766 AAGGCTAAGATTCAGGACAAGGAAGGG-ATCCCACCAGATCAGCAGAGACTCATCTTCGC 824
|| |||||||| || || || | |||| |||||||| || |||||||| || ||||| ||
Sbjct 633 AAAGCTAAGATCCAAGATAAAG-AGGGAATCCCACCGGACCAGCAGAGGCTTATCTTTGC 691
Query 825 TGGTAAACAGCTTGAGGATGGTCGGACTCTTGCGGATTACAATATTCAGAAGGAATCAAC 884
||||| ||||| ||||||||||| |||||||| |||||||| || || || || |||||
Sbjct 692 CGGTAAGCAGCTAGAGGATGGTCGCACTCTTGCTGATTACAACATCCAAAAAGAGTCAAC 751
Query 885 CCTTCACCTT-GTG-TTGCGTCTTCGTGGTGGCATGCAAATCTTTGTGAAGACTTTGACA 942
|||||| || ||| || ||||| | ||||| ||||| || ||||||||||| || ||
Sbjct 752 CCTTCA-TTTGGTGCTT-CGTCTGAGAGGTGGTATGCAGATTTTTGTGAAGACCTTAACT 809
Query 943 GGCAAGACTATTACTTTGGAGGTTGAGAGCTCAGACACTATTGATAACGTCAAGGCCAAG 1002
||||||||||| |||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct 810 GGCAAGACTATCACTTTGGAGGTTGAGAGCTCAGACACAATCGATAATGTCAAGGCAAAG 869
Query 1003 ATTCAGGACAAGGAAGGGATCCCTCCGGACCAACAGAGACTCATCTTCGCTGGGAAACAG 1062
||||| |||||||||||||| || || || || ||||||||||| || ||||| ||||||
Sbjct 870 ATTCAAGACAAGGAAGGGATTCCACCAGATCAGCAGAGACTCATATTTGCTGGAAAACAG 929
Query 1063 CTTGAGGATGGTCGGACTCTTGCAGATTACAACATCCAGAAGGAGTCGACTCTTCAT-TT 1121
||||| ||||| || || || || |||||||||||||| |||||||| || || ||| ||
Sbjct 930 CTTGAAGATGGACGCACACTCGCTGATTACAACATCCAAAAGGAGTCTACCCTCCATCTT 989
Query 1122 GGTTCTTCGTCTTCGTGGTGG 1142
| | |||||||| ||||||||
Sbjct 990 G-TGCTTCGTCTCCGTGGTGG 1009
> AT5G03240.1 | Symbols: UBQ3 | polyubiquitin 3 | chr5:771752-773363
REVERSE LENGTH=1237
Length=1237
Score = 1064 bits (576), Expect = 0.0
Identities = 806/918 (88%), Gaps = 12/918 (1%)
Strand=Plus/Plus
Query 3 GATGCAAATTTTTGTGAAAACACTCACTGGCAAGACCATTACTCTCGAGGTTGAGAGCTC 62
||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 92 GATGCAAATCTTCGTGAAAACACTCACTGGCAAGACTATCACTCTCGAGGTTGAGAGCTC 151
Query 63 TGACACCATTGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGGATTCCTCTAGACCA 122
||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || ||
Sbjct 152 TGACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCA 211
Query 123 GCAAAGATTGATCTTCGCCGGAAAACAGCTCGAAGATGGCCGTACTTTGGCCGATTACAA 182
||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||||||
Sbjct 212 GCAAAGATTAATATTCGCCGGTAAACAGCTAGAAGATGGCCGTACCTTGGCCGATTACAA 271
Query 183 CATCCAGAAAGAATCAACTCTCCACTTGGTTCTTCGTTTAAGAGGTGGTATGCAGATCTT 242
||| |||||||||||||| || || |||||||| |||||||||||||||||||| |||||
Sbjct 272 CATTCAGAAAGAATCAACCCTTCATTTGGTTCTCCGTTTAAGAGGTGGTATGCAAATCTT 331
Query 243 TGTGAAGACTTTGACTGGCAAAACAATCACTCTCGAGGTTGAGAGTTCAGACACTATTGA 302
||| |||||| |||||||||| || || ||| | ||||||||||| || |||||||||||
Sbjct 332 TGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCTGACACTATTGA 391
Query 303 CAATGTTAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAGCAGAGACTTAT 362
||| || ||||| |||||||| || || || |||||||| ||||| ||||||||||||||
Sbjct 392 CAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGATCAGCAGAGACTTAT 451
Query 363 CTTCGCTGGGAAACAGCTTGAAGATGGTCGTACACTCGCTGACTACAATATCCAGAAA-G 421
||| || || || ||||||||||| || | || || ||||||||||| || || ||| |
Sbjct 452 CTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACTACAACATTCA-AAAGG 510
Query 422 AGTCTACCCTCCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAGAT-TTTCGTGAAGACC 480
|||| ||||| |||||||||||||||||||||||||||||||| || ||| || ||||||
Sbjct 511 AGTCGACCCTTCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAAATCTTT-GTCAAGACC 569
Query 481 CTTACCGGCAAGACCATCA-CTTTGGAGGTTGAGAGCTCAGACACGATTGATAATGTCAA 539
|| || || || || |||| | || ||||||||||| |||||||| ||||| ||||||||
Sbjct 570 CTCACTGGTAAAACAATCACCCTT-GAGGTTGAGAGTTCAGACACCATTGACAATGTCAA 628
Query 540 GGCTAAGATTCAAGACAAGGAAGGG-ATCCCACCGGACCAGCAGAGACTTATCTTCGCTG 598
|||||||| ||||| || | |||| || || ||||| |||||||| |||||||| || |
Sbjct 629 AGCTAAGATCCAAGATAAAG-AGGGAATTCCTCCGGATCAGCAGAGGCTTATCTTTGCCG 687
Query 599 GGAAACAGCTTGAGGATGGTCGGACACTTGCGGATTACAACATCCAAAAAGAGTCTACAC 658
| || ||||| || ||||| || || ||||| ||||||||||||||||| ||||| ||||
Sbjct 688 GTAAGCAGCTCGAAGATGGACGCACCCTTGCAGATTACAACATCCAAAAGGAGTCGACAC 747
Query 659 TCCATCTTGTGCTTCGTCTCCGTGGTGGTATGCAAATCTTTGTGAAGACCCTTACCGGAA 718
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 748 TTCATCTTGTGCTTCGTCTCCGTGGTGGTATGCAGATCTTTGTGAAGACCCTTACCGGAA 807
Query 719 AAACCATTACTCTGGAGGTTGAGAGCTCAGACACAATCGATAATGTCAAGGCTAAGATTC 778
| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 808 AGACCATTACTCTGGAGGTTGAAAGCTCAGACACCATCGATAATGTCAAGGCTAAGATTC 867
Query 779 AGGACAAGGAAGGGATCCCACCAGATCAGCAGAGACTCATCTTCGCTGGTAAACAGCTTG 838
||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||
Sbjct 868 AGGACAAGGAAGGGATCCCACCAGACCAACAGAGACTCATCTTCGCTGGAAAACAGCTTG 927
Query 839 AGGATGGTCGGACTCTTGCGGATTACAATATTCAGAAGGAATCAACCCTTCACCTTG-TG 897
|||||||||| || ||||| |||||||| || |||||||| || || |||||| ||| |
Sbjct 928 AGGATGGTCGCACACTTGCAGATTACAACATCCAGAAGGAGTCGACTCTTCAC-TTGGTT 986
Query 898 -TTGCGTCTTCGTGGTGG 914
|| ||||||||||||||
Sbjct 987 CTT-CGTCTTCGTGGTGG 1003
Score = 878 bits (475), Expect = 0.0
Identities = 778/926 (84%), Gaps = 14/926 (2%)
Strand=Plus/Plus
Query 232 ATGCAGATCTTTGTGAAGACTTTGACTGGCAAAACAATCACTCTCGAGGTTGAGAGTTCA 291
||||| ||||| ||||| || | |||||||| || |||||||||||||||||||| ||
Sbjct 93 ATGCAAATCTTCGTGAAAACACTCACTGGCAAGACTATCACTCTCGAGGTTGAGAGCTCT 152
Query 292 GACACTATTGACAATGTTAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAG 351
||||| || ||||||||||| || ||||| || || || || || || || ||||| |||
Sbjct 153 GACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 212
Query 352 CAGAGACTT-ATCTTCGCTGGGAAACAGCTTGAAGATGGTCGTACAC-TCGCTGACTACA 409
|| ||| || || ||||| || |||||||| |||||||| ||||| | | || || ||||
Sbjct 213 CAAAGA-TTAATATTCGCCGGTAAACAGCTAGAAGATGGCCGTAC-CTTGGCCGATTACA 270
Query 410 ATATCCAGAAAGAGTCTACCCTCCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAGAT-T 468
| || |||||||| || ||||| |||||||| || ||| | |||||||||||||| || |
Sbjct 271 ACATTCAGAAAGAATCAACCCTTCATTTGGTTCTCCGTTTAAGAGGTGGTATGCAAATCT 330
Query 469 TTCGTGAAGACCCTTACCGGCAAGACCATCACTTTGGAGGTTGAGAGCTCAGACACGATT 528
|| || ||||| || || ||||||||||| |||||||||||||||||||| ||||| |||
Sbjct 331 TT-GTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCTGACACTATT 389
Query 529 GATAATGTCAAGGCTAAGATTCAAGACAAGGAAGGGATCCCACCGGACCAGCAGAGACTT 588
|| || ||||| || ||||| || ||||||||||| ||||| ||||| ||||||||||||
Sbjct 390 GACAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGATCAGCAGAGACTT 449
Query 589 ATCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACACTTGCGGATTACAACATCCAAAAA 648
||||| || || || |||||||| || || | || ||||| || |||||||| |||||
Sbjct 450 ATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTTGCTGACTACAACATTCAAAAG 509
Query 649 GAGTCTACACTCCATCTT-GTGCTTCGTCTCCGTGGTGGTATGCAAATCTTTGTGAAGAC 707
||||| || || ||| || |||||||||||| | |||||||||||||||||||| |||||
Sbjct 510 GAGTCGACCCTTCAT-TTGGTGCTTCGTCTCAGAGGTGGTATGCAAATCTTTGTCAAGAC 568
Query 708 CCTTACCGGAAAAACCATTACTCTGGAGGTTGAGAGCTCAGACACAATCGATAATGTCAA 767
||| || || ||||| || || || ||||||||||| |||||||| || || ||||||||
Sbjct 569 CCTCACTGGTAAAACAATCACCCTTGAGGTTGAGAGTTCAGACACCATTGACAATGTCAA 628
Query 768 GGCTAAGATTCAGGACAAGGAAGGG-ATCCCACCAGATCAGCAGAGACTCATCTTCGCTG 826
|||||||| || || || | |||| || || || ||||||||||| || ||||| || |
Sbjct 629 AGCTAAGATCCAAGATAAAG-AGGGAATTCCTCCGGATCAGCAGAGGCTTATCTTTGCCG 687
Query 827 GTAAACAGCTTGAGGATGGTCGGACTCTTGCGGATTACAATATTCAGAAGGAATCAACCC 886
|||| ||||| || ||||| || || ||||| |||||||| || || ||||| || || |
Sbjct 688 GTAAGCAGCTCGAAGATGGACGCACCCTTGCAGATTACAACATCCAAAAGGAGTCGACAC 747
Query 887 TTCACCTTGTG-TTGCGTCTTCGTGGTGGCATGCAAATCTTTGTGAAGA-CTTTGACAGG 944
|||| |||||| || ||||| |||||||| ||||| ||||||||||||| | || || ||
Sbjct 748 TTCATCTTGTGCTT-CGTCTCCGTGGTGGTATGCAGATCTTTGTGAAGACCCTT-ACCGG 805
Query 945 CAAGACTATTACTTTGGAGGTTGAGAGCTCAGACACTATTGATAACGTCAAGGCCAAGAT 1004
||||| |||||| |||||||||| ||||||||||| || ||||| |||||||| |||||
Sbjct 806 AAAGACCATTACTCTGGAGGTTGAAAGCTCAGACACCATCGATAATGTCAAGGCTAAGAT 865
Query 1005 TCAGGACAAGGAAGGGATCCCTCCGGACCAACAGAGACTCATCTTCGCTGGGAAACAGCT 1064
||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct 866 TCAGGACAAGGAAGGGATCCCACCAGACCAACAGAGACTCATCTTCGCTGGAAAACAGCT 925
Query 1065 TGAGGATGGTCGGACTCTTGCAGATTACAACATCCAGAAGGAGTCGACTCTTCATTTGGT 1124
|||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 926 TGAGGATGGTCGCACACTTGCAGATTACAACATCCAGAAGGAGTCGACTCTTCACTTGGT 985
Query 1125 TCTTCGTCTTCGTGGTGGAAGCTTCT 1150
||||||||||||||||||||||||||
Sbjct 986 TCTTCGTCTTCGTGGTGGAAGCTTCT 1011
Score = 697 bits (377), Expect = 0.0
Identities = 588/690 (85%), Gaps = 14/690 (2%)
Strand=Plus/Plus
Query 4 ATGCAAATTTTTGTGAAAACACTCACTGGCAAGACCATTACTCTCGAGGTTGAGAGCTCT 63
|||||||| ||||| || || || |||||||||||||||||| | |||||||||||||||
Sbjct 321 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCT 380
Query 64 GACACCATTGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGGATTCCTCTAGACCAG 123
||||| |||||||| || || |||||||| |||||||||||||| || |||| || |||
Sbjct 381 GACACTATTGACAACGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGATCAG 440
Query 124 CAAAGA-TTGATCTTCGCCGGAAAACAGCTCGAAGATGGCCGTACT-TTGGCCGATTACA 181
|| ||| || ||||| ||||| || ||||| ||||| || | ||| || || || ||||
Sbjct 441 CAGAGACTT-ATCTTTGCCGGTAAGCAGCTTGAAGACGGAAGAACTCTT-GCTGACTACA 498
Query 182 ACATCCAGAAA-GAATCAACTCTCCACTTGGTTCTTCGTTTAAGAGGTGGTATGCAGATC 240
|||| || ||| || || || || || ||||| |||||| | |||||||||||||| |||
Sbjct 499 ACATTCA-AAAGGAGTCGACCCTTCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAAATC 557
Query 241 TTTGTGAAGACTTTGACTGGCAAAACAATCACTCTCGAGGTTGAGAGTTCAGACACTATT 300
||||| ||||| | ||||| ||||||||||| || |||||||||||||||||||| |||
Sbjct 558 TTTGTCAAGACCCTCACTGGTAAAACAATCACCCTTGAGGTTGAGAGTTCAGACACCATT 617
Query 301 GACAATGTTAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAGCAGAGACTT 360
|||||||| ||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct 618 GACAATGTCAAAGCTAAGATCCAAGATAAAGAGGGAATTCCTCCGGATCAGCAGAGGCTT 677
Query 361 ATCTTCGCTGGGAAACAGCTTGAAGATGGTCGTACACTCGCTGACTACAATATCCAGAAA 420
||||| || || || ||||| |||||||| || || || || || ||||| ||||| |||
Sbjct 678 ATCTTTGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTGCAGATTACAACATCCA-AAA 736
Query 421 G-AGTCTACCCTCCAT-TTGGTGCTTCGTCTCAGAGGTGGTATGCAGAT-TTTCGTGAAG 477
| |||| || || ||| ||| ||||||||||| | |||||||||||||| ||| ||||||
Sbjct 737 GGAGTCGACACTTCATCTTG-TGCTTCGTCTCCGTGGTGGTATGCAGATCTTT-GTGAAG 794
Query 478 ACCCTTACCGGCAAGACCATCACTTTGGAGGTTGAGAGCTCAGACACGATTGATAATGTC 537
||||||||||| |||||||| ||| |||||||||| ||||||||||| || |||||||||
Sbjct 795 ACCCTTACCGGAAAGACCATTACTCTGGAGGTTGAAAGCTCAGACACCATCGATAATGTC 854
Query 538 AAGGCTAAGATTCAAGACAAGGAAGGGATCCCACCGGACCAGCAGAGACTTATCTTCGCT 597
|||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||
Sbjct 855 AAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAACAGAGACTCATCTTCGCT 914
Query 598 GGGAAACAGCTTGAGGATGGTCGGACACTTGCGGATTACAACATCCAAAAAGAGTCTACA 657
|| |||||||||||||||||||| |||||||| |||||||||||||| || ||||| ||
Sbjct 915 GGAAAACAGCTTGAGGATGGTCGCACACTTGCAGATTACAACATCCAGAAGGAGTCGACT 974
Query 658 CTCCATCTTG-TGCTTCGTCTCCGTGGTGG 686
|| || |||| | |||||||| ||||||||
Sbjct 975 CTTCA-CTTGGTTCTTCGTCTTCGTGGTGG 1003
> AT1G65350.1 | Symbols: UBQ13 | ubiquitin 13 | chr1:24272518-24277275
REVERSE LENGTH=960
Length=960
Score = 996 bits (539), Expect = 0.0
Identities = 745/844 (88%), Gaps = 15/844 (2%)
Strand=Plus/Plus
Query 232 ATGCAGATCTTTGTGAAGACTTTGACTGGCAAAACAATCACTCTCGAGGTTGAGAGTTCA 291
|||||||| ||||| ||||||||||| |||||||| |||||| | |||||||| |||||
Sbjct 1 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAGGTTGAAAGTTCT 60
Query 292 GACACTATTGACAATGTTAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAG 351
|| ||||||||||||||||| ||||||||||| ||||| || |||||||| ||||| |||
Sbjct 61 GATACTATTGACAATGTTAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCAG 120
Query 352 CAGAGACTTATCTTCGCTGGGAAACAGCTTGAAGATGGTCGTACACTCGCTGACTACAAT 411
||||| |||||||| || || || ||||||||||| ||||| ||||||||||| |||||
Sbjct 121 CAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGACGGTCGCACACTCGCTGATTACAAC 180
Query 412 ATCCAGAAA-GAGTCTACCCTCCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAGAT-TT 469
||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 181 ATCCA-AAAGGAGTCCACCCTCCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAGATATT 239
Query 470 TCGTGAAGACCCTTACCGGCAAGACCATCACTTTGGAGGTTGAGAGCTCAGACACGATTG 529
| ||||||||||| || || ||||| ||||||||||||||||||||||||||||| || |
Sbjct 240 T-GTGAAGACCCTCACTGGAAAGACAATCACTTTGGAGGTTGAGAGCTCAGACACCATCG 298
Query 530 ATAATGTCAAGGCTAAGATTCAAGACAAGGAAGGGATCCCACCGGACCAGCAGAGACTTA 589
|||| || |||||||||||||| ||||||||||| |||||||| ||||| |||||||| |
Sbjct 299 ATAACGTGAAGGCTAAGATTCAGGACAAGGAAGGTATCCCACCAGACCAACAGAGACTCA 358
Query 590 TCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACACTTGCGGATTACAACATCCAAAAAG 649
||||||||||||||||||||||||||||||| |||||||| || ||| ||||| || |
Sbjct 359 TCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACACTTGCTGA---CAATATCCAGAAGG 415
Query 650 AGTCTACACTCCATCTTGTGCTT-CGTCTCCGTGGTGGTATGCAAATCTTTGTGAAGACC 708
||||||| || || |||||| || ||||| |||||||||||||||||||||||||| ||
Sbjct 416 AGTCTACGCTTCACCTTGTG-TTGCGTCTTCGTGGTGGTATGCAAATCTTTGTGAAAACT 474
Query 709 CTT-ACCGGAAAAACCATTACTCT-GGAGGTTGAGAGCTCAGACACAATCGATAATGTCA 766
|| || || || |||||||| || |||||||||||||||||||||||| ||||||||||
Sbjct 475 -TTGACAGGCAAGACCATTAC-CTTGGAGGTTGAGAGCTCAGACACAATTGATAATGTCA 532
Query 767 AGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGACTCATCTTCGCTG 826
| |||||||||||||| |||||| ||||||||||||| || |||||||||||||| ||||
Sbjct 533 AAGCTAAGATTCAGGATAAGGAATGGATCCCACCAGACCAACAGAGACTCATCTTTGCTG 592
Query 827 GTAAACAGCTTGAGGATGGTCGGACTCTTG-CGGATTACAATATTCAGAAGGAATCAACC 885
|||||||||| |||||||| ||||| ||| | |||||||| || ||||| || || ||
Sbjct 593 GTAAACAGCTCGAGGATGGAAGGACT-TTGGCTGATTACAACATCCAGAAAGAGTCTACT 651
Query 886 CTTCACCTTGTGTTGCGTCTTCGTGGTGGCATGCAAATCTTTGTGAAGACTTTGACAGGC 945
||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 652 CTTCACCTTGTATTGCGTCTTCGTGGTGGTATGCAAATCTTTGTGAAAACTTTGACAGGC 711
Query 946 AAGACTATTACTTTGGAGGTTGAGAGCTCAGACACTATTGATAACGTCAAGGCCAAGATT 1005
||||| ||||| ||||||||||||||||||| ||| || |||||||||||||| |||||
Sbjct 712 AAGACAATTACCTTGGAGGTTGAGAGCTCAGGCACAATCGATAACGTCAAGGCTAAGATA 771
Query 1006 CAGGACAAGGAAGGGATCCCTCCGGACCAACAGAGACTCATCTTCGCTGGGAAACAGCTT 1065
||||||||||| ||||| || || |||||||||||||||||||||||||||||||||||
Sbjct 772 CAGGACAAGGAGGGGATTCCACCAGACCAACAGAGACTCATCTTCGCTGGGAAACAGCTC 831
Query 1066 GAGG 1069
||||
Sbjct 832 GAGG 835
Score = 760 bits (411), Expect = 0.0
Identities = 598/688 (87%), Gaps = 13/688 (2%)
Strand=Plus/Plus
Query 460 ATGCAGATTTTCGTGAAGACCCTT-ACCGGCAAGACCATCACTTTGGAGGTTGAGAGCTC 518
||||||||||| || |||| | || || ||||| |||||||||||||||||||| || ||
Sbjct 1 ATGCAGATTTTTGTCAAGA-CTTTGACAGGCAAAACCATCACTTTGGAGGTTGAAAGTTC 59
Query 519 AGACACGATTGATAATGTCAAGGCTAAGATTCAAGACAAGGAAGGGATCCCACCGGACCA 578
|| || ||||| ||||| ||||||||||| || || |||||||| ||||| ||||| ||
Sbjct 60 TGATACTATTGACAATGTTAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCA 119
Query 579 GCAGAGACTTATCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACACTTGCGGATTACAA 638
|||||| |||||||| || || || |||||||| || ||||| ||||| || ||||||||
Sbjct 120 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGACGGTCGCACACTCGCTGATTACAA 179
Query 639 CATCCAAAAAGAGTCTACACTCCATCTT-GTGCTTCGTCTCCGTGGTGGTATGCAAATCT 697
||||||||| ||||| || |||||| || |||||||||||| | ||||||||||| || |
Sbjct 180 CATCCAAAAGGAGTCCACCCTCCAT-TTGGTGCTTCGTCTCAGAGGTGGTATGCAGATAT 238
Query 698 TTGTGAAGACCCTTACCGGAAAAACCATTACTCTGGAGGTTGAGAGCTCAGACACAATCG 757
||||||||||||| || ||||| || || ||| |||||||||||||||||||||| ||||
Sbjct 239 TTGTGAAGACCCTCACTGGAAAGACAATCACTTTGGAGGTTGAGAGCTCAGACACCATCG 298
Query 758 ATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGACTCA 817
|||| || |||||||||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct 299 ATAACGTGAAGGCTAAGATTCAGGACAAGGAAGGTATCCCACCAGACCAACAGAGACTCA 358
Query 818 TCTTCGCTGGTAAACAGCTTGAGGATGGTCGGACTCTTGCGGATTACAATATTCAGAAGG 877
|||||||||| |||||||||||||||||||| || ||||| | ||||||| |||||||
Sbjct 359 TCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACACTTGC---TGACAATATCCAGAAGG 415
Query 878 AATCAACCCTTCACCTTGTGTTGCGTCTTCGTGGTGGCATGCAAATCTTTGTGAAGACTT 937
| || || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 416 AGTCTACGCTTCACCTTGTGTTGCGTCTTCGTGGTGGTATGCAAATCTTTGTGAAAACTT 475
Query 938 TGACAGGCAAGACTATTACTTTGGAGGTTGAGAGCTCAGACACTATTGATAACGTCAAGG 997
||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||| |
Sbjct 476 TGACAGGCAAGACCATTACCTTGGAGGTTGAGAGCTCAGACACAATTGATAATGTCAAAG 535
Query 998 CCAAGATTCAGGACAAGGAAGGGATCCCTCCGGACCAACAGAGACTCATCTTCGCTGGGA 1057
| ||||||||||| |||||| ||||||| || |||||||||||||||||||| ||||| |
Sbjct 536 CTAAGATTCAGGATAAGGAATGGATCCCACCAGACCAACAGAGACTCATCTTTGCTGGTA 595
Query 1058 AACAGCTTGAGGATGGTCGGACTCTTG-CAGATTACAACATCCAGAAGGAGTCGACTCTT 1116
||||||| |||||||| ||||| ||| | ||||||||||||||||| ||||| ||||||
Sbjct 596 AACAGCTCGAGGATGGAAGGACT-TTGGCTGATTACAACATCCAGAAAGAGTCTACTCTT 654
Query 1117 CAT-TTGGTTCTT-CGTCTTCGTGGTGG 1142
|| ||| | || ||||||||||||||
Sbjct 655 CACCTTG-TA-TTGCGTCTTCGTGGTGG 680
Score = 394 bits (213), Expect = 1e-108
Identities = 381/461 (83%), Gaps = 15/461 (3%)
Strand=Plus/Plus
Query 688 ATGCAAATCTTTGTGAAGACCCTT-ACCGGAAAAACCATTACTCTGGAGGTTGAGAGCTC 746
||||| || ||||| |||| | || || || |||||||| ||| |||||||||| || ||
Sbjct 1 ATGCAGATTTTTGTCAAGA-CTTTGACAGGCAAAACCATCACTTTGGAGGTTGAAAGTTC 59
Query 747 AGACACAATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGATCA 806
|| || || || ||||| ||||||||||| ||||| |||||||| ||||| || |||||
Sbjct 60 TGATACTATTGACAATGTTAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCA 119
Query 807 GCAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGGACTCTTGCGGATTACAA 866
|||||| || ||||| || ||||| |||||||| || ||||| || || || ||||||||
Sbjct 120 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGACGGTCGCACACTCGCTGATTACAA 179
Query 867 TATTCAGAAGGAATCAACCCTTCACCTT-GTG-TTGCGTCTTC-GTGGTGGCATGCAAAT 923
|| || ||||| || ||||| || || ||| || |||| || | ||||| ||||| ||
Sbjct 180 CATCCAAAAGGAGTCCACCCTCCA-TTTGGTGCTT-CGTC-TCAGAGGTGGTATGCAGAT 236
Query 924 CTTTGTGAAGACTTTGACAGGCAAGACTATTACTTTGGAGGTTGAGAGCTCAGACACTAT 983
||||||||||| | || || ||||| || |||||||||||||||||||||||||| ||
Sbjct 237 ATTTGTGAAGACCCTCACTGGAAAGACAATCACTTTGGAGGTTGAGAGCTCAGACACCAT 296
Query 984 TGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGGATCCCTCCGGACCAACAGAGACT 1043
|||||||| ||||| |||||||||||||||||||| ||||| || ||||||||||||||
Sbjct 297 CGATAACGTGAAGGCTAAGATTCAGGACAAGGAAGGTATCCCACCAGACCAACAGAGACT 356
Query 1044 CATCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACTCTTGCAGATTACAACATCCAGAA 1103
||||||||||||||||||||||||||||||||| || ||||| || ||| ||||||||
Sbjct 357 CATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACACTTGCTGA---CAATATCCAGAA 413
Query 1104 GGAGTCGACTCTTCAT-TTG-GTTCTTCGTCTTCGTGGTGG 1142
|||||| || ||||| ||| ||| ||||||||||||||
Sbjct 414 GGAGTCTACGCTTCACCTTGTGTTG--CGTCTTCGTGGTGG 452
Score = 111 bits (60), Expect = 1e-23
Identities = 64/66 (97%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 1087 GATTACAACATCCAGAAGGAGTCGACTCTTCATTTGGTTCTTCGTCTTCGTGGTGGAAGC 1146
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 895 GATTACAACATCCAGAAGGAATCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGGAAGC 954
Query 1147 TTCTGA 1152
||||||
Sbjct 955 TTCTGA 960
> AT5G37640.1 | Symbols: UBQ9 | ubiquitin 9 | chr5:14952782-14953750
REVERSE LENGTH=969
Length=969
Score = 728 bits (394), Expect = 0.0
Identities = 754/927 (81%), Gaps = 27/927 (3%)
Strand=Plus/Plus
Query 3 GATGCAAATTTTTGTGAAA-ACACTCACTGGCAAGACCATTACTC-TCGAGGTTG-AGAG 59
|||||||||| | ||| || ||||| | |||||||| || | | || |||| | ||
Sbjct 6 GATGCAAATTCACG-CAAAGACTCTCACAGAAAAGACCATAAC-CATTGACGTTGTA-AG 62
Query 60 CTCTGACACCATTGACAATGTTAAGGCAAAGATTCAGGACA-AGGAAGGGATTCCTCTAG 118
||| |||||||| | ||||| || |||||||| ||||||| | ||||||||||||||||
Sbjct 63 CTCCGACACCATCAATAATGTCAAAGCAAAGATCCAGGACATA-GAAGGGATTCCTCTAG 121
Query 119 ACCAGCAAAGATTGATCTTCGCCGGAAAACAGCTCGAAGATGGCCGTACTTTGGCCGATT 178
||||||||||| | ||||| |||| |||| ||| || ||||||||||||||||||||||
Sbjct 122 ACCAGCAAAGACTCATCTTTTCCGGTAAACTGCTAGATGATGGCCGTACTTTGGCCGATT 181
Query 179 ACAACATCCAGAAAGAATCAACT-CTCCACTTGGTTCTTC-GTTTAAGAGGTGGTATGCA 236
||| ||||| ||||| |||| | |||||||| | || || | || ||||||||||||||
Sbjct 182 ACAGTATCCAAAAAGATTCAA-TACTCCACTTAGCTC-TCAGGTTGAGAGGTGGTATGCA 239
Query 237 GATCTTTGTGAAGAC-TTTGACTGGCAAAACAATCACTCTCGAGGTTGAGAGTTCAGACA 295
||| ||||| ||||| || || || ||||| || || || || ||||||||||||||||
Sbjct 240 GATATTTGTCAAGACGCTT-ACCGGTAAAACCATTACCCTTGAAGTTGAGAGTTCAGACA 298
Query 296 CTATTGACAATGTTAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAGCAGA 355
||||||||||||||||||||||||||||||| || || ||| |||| ||||| || ||||
Sbjct 299 CTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAAGGAGTCCCTCCGGATCAACAGA 358
Query 356 GACTTATCTTCGCTGGGAAACAGCTTGAAGATGGTCGTACACTCGCTGACTACAATATCC 415
|||| ||||| ||||| ||||||||||| |||||||| || || || || ||||| ||||
Sbjct 359 GACTAATCTTTGCTGGTAAACAGCTTGACGATGGTCGCACTCTTGCAGATTACAACATCC 418
Query 416 AGAAAGAGTCTACCCTCCATTTGGTGCTTC-G-TCTCAGAGGTGGTATGCAGATTTTCGT 473
||||||| || || ||||| ||||| || | | | | |||||||||||||||||||| ||
Sbjct 419 AGAAAGAATCAACTCTCCACTTGGTTCT-CAGGT-TGAGAGGTGGTATGCAGATTTTTGT 476
Query 474 GAAGACCCTTACCGGCAAGACCATCA-CTTTGGAGGTTGAGAGCTCAGACACGATTGATA 532
| ||| |||||| | || ||||| | ||||||| ||||||||||| ||||| | ||||
Sbjct 477 CAGGACACTTACCCGAAAAACCAT-AGCTTTGGAAGTTGAGAGCTCTGACACAACCGATA 535
Query 533 ATGTCAAGGCTAAGATTCAAGACAAGGAAGGGATCCCACCGGACCAGCAGAGACTTATCT 592
|||| ||||| ||||| |||||||| |||||||||||||| ||||| |||||||||||||
Sbjct 536 ATGTGAAGGCCAAGATACAAGACAAAGAAGGGATCCCACCAGACCAACAGAGACTTATCT 595
Query 593 TCGCTGGGAAACAGCTTGAGGATGGTCGGACACTTGCGGATTACAACATCCAAAAAGAGT 652
| || || ||||| || || ||||||||||| ||||| |||||||||||||| || ||||
Sbjct 596 TTGCAGGCAAACAACTCGAAGATGGTCGGACGCTTGCTGATTACAACATCCAGAAGGAGT 655
Query 653 CTACACTCCATCTTGTGCTTCGTCTCCGTGGTGGTATGCAAATCTTTGTGAAGACCCTT- 711
| ||||| ||||| ||||| ||||| ||||||| ||||| || ||||| || || ||
Sbjct 656 CAACACTTCATCTCGTGCTGCGTCTTTGTGGTGGGATGCAGATATTTGTCAACACT-TTG 714
Query 712 ACCGGAAAAACCATTACTCTGGAGGTTGAGAGCTCAGACACAATCGATAATGTCAAGGCT 771
|| ||||| ||||| || || || || |||||||| || || || || ||||| |||||
Sbjct 715 ACGGGAAAGACCATCACACTTGAAGTGGAGAGCTCTGATACGATTGACAATGTGAAGGCC 774
Query 772 AAGATTCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGACTCATCTTCGCTGGTAAA 831
|||||||||||||| ||| |||||| ||| || || ||||| || ||||| || || |
Sbjct 775 AAGATTCAGGACAAAGAAAGGATCCAACCGGACCAACAGAGGCTAATCTTTGCAGGCGAG 834
Query 832 CAGCTTGAGGATGGTCGG-ACTCTT--GCGGATTACAATATTCAGAAGGAATCAACCCTT 888
|||||||| |||||| || ||| |||||||||||||| ||||| || ||||| |||
Sbjct 835 CAGCTTGAAGATGGTTATTACACTTTAGCGGATTACAATATCCAGAAAGAGTCAACTCTT 894
Query 889 CACCTTGTGT-TGCGTCTTCGTGGTGG 914
|||||||| | | ||||| || |||||
Sbjct 895 CACCTTGT-TCTCCGTCTCCGCGGTGG 920
Score = 483 bits (261), Expect = 2e-135
Identities = 555/696 (80%), Gaps = 23/696 (3%)
Strand=Plus/Plus
Query 4 ATGCAAATTTTTGTGAAAACACTCACTGGCAAGACCATTACTCTCGAGGTTGAGAGCTCT 63
||||| || ||||| || || || || || || |||||||| || || |||||||| ||
Sbjct 235 ATGCAGATATTTGTCAAGACGCTTACCGGTAAAACCATTACCCTTGAAGTTGAGAGTTCA 294
Query 64 GACACCATTGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGGA-TTCCTCTAGACCA 122
||||| |||||||||||||| || ||||| || ||||||||| ||| | |||| || ||
Sbjct 295 GACACTATTGACAATGTTAAAGCTAAGATCCAAGACAAGGAA-GGAGTCCCTCCGGATCA 353
Query 123 GCAAAGATTGATCTTCGCCGGAAAACAGCTCGAAGATGGCCGTACT-TTGGCCGATTACA 181
|| ||| | ||||| || || |||||||| || ||||| || ||| || || |||||||
Sbjct 354 ACAGAGACTAATCTTTGCTGGTAAACAGCTTGACGATGGTCGCACTCTT-GCAGATTACA 412
Query 182 ACATCCAGAAAGAATCAACTCTCCACTTGGTTCTTC-GTTTAAGAGGTGGTATGCAGATC 240
|||||||||||||||||||||||||||||||||| | | || |||||||||||||||||
Sbjct 413 ACATCCAGAAAGAATCAACTCTCCACTTGGTTCT-CAGGTTGAGAGGTGGTATGCAGATT 471
Query 241 TTTGTGAAGACT-TTGACTGGCAAAACAATCA-CTCTCGAGGTTGAGAGTTCAGACACTA 298
||||| | ||| || || | ||||| || | || | || |||||||| || ||||| |
Sbjct 472 TTTGTCAGGACACTT-ACCCGAAAAACCAT-AGCTTTGGAAGTTGAGAGCTCTGACACAA 529
Query 299 TTGACAATGTTAAAGCTAAGATCCAAGATAAAGA-GGGAATCCCACCGGACCAGCAGAGA 357
|| ||||| || || ||||| ||||| ||||| |||| ||||||| ||||| ||||||
Sbjct 530 CCGATAATGTGAAGGCCAAGATACAAGACAAAGAAGGGA-TCCCACCAGACCAACAGAGA 588
Query 358 CTTATCTTCGCTGGGAAACAGCTTGAAGATGGTCGTACACTCGCTGACTACAATATCCAG 417
|||||||| || || ||||| || ||||||||||| || || ||||| ||||| ||||||
Sbjct 589 CTTATCTTTGCAGGCAAACAACTCGAAGATGGTCGGACGCTTGCTGATTACAACATCCAG 648
Query 418 AAAGAGTCTACCCTCCATTTGGTGCTTCGTCTCAGAGGTGGTATGCAGAT-TTTCGTGAA 476
|| ||||| || || ||| | ||||| ||||| | ||||| |||||||| ||| || ||
Sbjct 649 AAGGAGTCAACACTTCATCTCGTGCTGCGTCTTTGTGGTGGGATGCAGATATTT-GTCAA 707
Query 477 GACCCTT-ACCGGCAAGACCATCACT-TTGGAGGTTGAGAGCTCAGACACGATTGATAAT 534
|| || || || ||||||||||| ||| || | |||||||| || |||||||| |||
Sbjct 708 CACT-TTGACGGGAAAGACCATCACACTTGAAG-TGGAGAGCTCTGATACGATTGACAAT 765
Query 535 GTCAAGGCTAAGATTCAAGACAAGGAAGGGATCCCACCGGACCAGCAGAGACTTATCTTC 594
|| ||||| |||||||| ||||| ||| |||||| ||||||||| ||||| || |||||
Sbjct 766 GTGAAGGCCAAGATTCAGGACAAAGAAAGGATCCAACCGGACCAACAGAGGCTAATCTTT 825
Query 595 GCTGG-GAAACAGCTTGAGGATGGTCGG-ACACTT--GCGGATTACAACATCCAAAAAGA 650
|| || || |||||||| |||||| |||||| ||||||||||| ||||| |||||
Sbjct 826 GCAGGCGAG-CAGCTTGAAGATGGTTATTACACTTTAGCGGATTACAATATCCAGAAAGA 884
Query 651 GTCTACACTCCATCTTGTGCTTCGTCTCCGTGGTGG 686
||| || || || ||||| || |||||||| |||||
Sbjct 885 GTCAACTCTTCACCTTGTTCTCCGTCTCCGCGGTGG 920
> AT1G55060.1 | Symbols: UBQ12 | ubiquitin 12 | chr1:20549533-20550225
FORWARD LENGTH=693
Length=693
Score = 492 bits (266), Expect = 4e-138
Identities = 519/642 (81%), Gaps = 14/642 (2%)
Strand=Plus/Plus
Query 280 GTTGAGAGTTCAGACACTATTGACAATGTTAAAGCTAAGATCCAAGATAAAG-AGGGAAT 338
|||||||| || ||||| || || || || || || ||||| ||||||| || |||| ||
Sbjct 49 GTTGAGAGCTCGGACACAATCGATAACGTGAAGGCCAAGATTCAAGATATAGAAGGG-AT 107
Query 339 CCCACCGGACCAGCAGAGACTTATCTTCGCTGGGAAACAGCTTGAAGATGGTCGTACACT 398
|||||| ||||| || ||||||||||| || || || ||||| ||||||||||| || ||
Sbjct 108 CCCACCAGACCAACATAGACTTATCTTTGCAGGCAAGCAGCTCGAAGATGGTCGGACTCT 167
Query 399 CGCTGACTACAATATCCAGAAAGAGTCTACCCTCCATTTGGTGCTTCG-TCTCAGAGGTG 457
||||| ||||| ||||| | || || ||||| ||| | | || | | || | ||||
Sbjct 168 TGCTGATTACAACGTCCAGGAGGATTCCACCCTTCATCTCCTTCTGAGAT-TCCGTGGTG 226
Query 458 GTATGCAGATTTTCGTGAAGACCCTTACCGGCAAGACCATCACTTTGGAGGTTGAGAGCT 517
| |||||||||||||||||||||||||||||||| ||||| || | || ||||||||||
Sbjct 227 GGATGCAGATTTTCGTGAAGACCCTTACCGGCAAAACCATTACCCTAGAAGTTGAGAGCT 286
Query 518 CAGACACGATTGATAATGTCAAGGCTAAGATTCAAGACAAGGAAGGGATCCCACCGGACC 577
| || || || ||||| | ||||| |||||||| ||||| |||||||||||||| ||||
Sbjct 287 CTGATACAATCGATAACCTGAAGGCCAAGATTCAGGACAAAGAAGGGATCCCACCAGACC 346
Query 578 AGCAGAGACTTATCTTCGCTGGGAAA-CAGCTTGAGGATGGTCGGACACTTGCGGATTAC 636
| |||||||| ||||| || || ||| ||||| || ||||||||||| ||||| ||||||
Sbjct 347 AACAGAGACTCATCTTTGCAGG-AAAGCAGCTCGAAGATGGTCGGACTCTTGCAGATTAC 405
Query 637 AACATCCAAAAAGAGTCTACACTCCATCTTGTGCTTCGTCTCCGTGGTGGTATGCAAATC 696
||||||||||| ||||| ||||| || |||||||| ||||| |||||||| ||||| ||
Sbjct 406 AACATCCAAAAGGAGTCAACACTTCACCTTGTGCTGCGTCTTCGTGGTGGGATGCAGAT- 464
Query 697 TTT-GTGAAGACCCTT-ACCGGAAAAACCATTACTCTGGAGGTTGAGAGCTCAGACACAA 754
||| || ||||| || || ||||| ||||| || || || || || ||||| || || |
Sbjct 465 TTTCGTAAAGACT-TTGACGGGAAAGACCATCACGCTTGAAGTGGAAAGCTCTGATACGA 523
Query 755 TCGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGAC 814
| || ||||| ||||| |||||||||||||| |||||||| ||||||| || |||||||
Sbjct 524 TTGACAATGTGAAGGCAAAGATTCAGGACAAAGAAGGGATTTCACCAGACCAACAGAGAC 583
Query 815 TCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGGACTCTT-GCGGATTACAATATTCAG 873
||||||| || || || |||| ||| |||||||| ||| || ||||||||||| || |||
Sbjct 584 TCATCTTTGCAGGCAAGCAGCATGAAGATGGTCGCACT-TTAGCGGATTACAACATCCAG 642
Query 874 AAGGAATCAACCCTTCACCTTGTGT-TGCGTCTTCGTGGTGG 914
|| || ||||| ||||||||||| | | ||||| || |||||
Sbjct 643 AAAGAGTCAACTCTTCACCTTGT-TCTCCGTCTCCGCGGTGG 683
Score = 375 bits (203), Expect = 4e-103
Identities = 379/463 (82%), Gaps = 16/463 (3%)
Strand=Plus/Plus
Query 688 ATGCAAATCTTTGTGAAGACCCTTACCGGAAAAACCATTA-CTCTGGAGGTTGAGAGCTC 746
||||| || ||| | ||||| ||||||||||| || | | | |||| |||||||||||
Sbjct 1 ATGCAGATTTTTCTCAAGACTCTTACCGGAAAGACGA-AAGTTTTGGAAGTTGAGAGCTC 59
Query 747 AGACACAATCGATAATGTCAAGGCTAAGATTCAGGACA-AGGAAGGGATCCCACCAGATC 805
|||||||||||||| || ||||| |||||||| || | | ||||||||||||||||| |
Sbjct 60 GGACACAATCGATAACGTGAAGGCCAAGATTCAAGATATA-GAAGGGATCCCACCAGACC 118
Query 806 AGCAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGGACTCTTGCGGATTACA 865
| || ||||| ||||| || || || ||||| || ||||||||||||||||| |||||||
Sbjct 119 AACATAGACTTATCTTTGCAGGCAAGCAGCTCGAAGATGGTCGGACTCTTGCTGATTACA 178
Query 866 ATATTCAGAAGGAATCAACCCTTCACCTTGTGT-TGCGTCTT-CGTGGTGGCATGCAAAT 923
| | ||| |||| || |||||||| || | | || | || |||||||| ||||| ||
Sbjct 179 ACGTCCAGGAGGATTCCACCCTTCATCTCCT-TCTGAG-ATTCCGTGGTGGGATGCAGAT 236
Query 924 CTTT-GTGAAGA-CTTTGACAGGCAAGACTATTACTTTGGAGGTTGAGAGCTCAGACACT 981
||| ||||||| | || || ||||| || ||||| | || ||||||||||| || ||
Sbjct 237 -TTTCGTGAAGACCCTT-ACCGGCAAAACCATTACCCTAGAAGTTGAGAGCTCTGATACA 294
Query 982 ATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGGATCCCTCCGGACCAACAGAGA 1041
|| |||||| | |||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct 295 ATCGATAACCTGAAGGCCAAGATTCAGGACAAAGAAGGGATCCCACCAGACCAACAGAGA 354
Query 1042 CTCATCTTCGCTGGGAAA-CAGCTTGAGGATGGTCGGACTCTTGCAGATTACAACATCCA 1100
|||||||| || ||||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct 355 CTCATCTTTGC-AGGAAAGCAGCTCGAAGATGGTCGGACTCTTGCAGATTACAACATCCA 413
Query 1101 GAAGGAGTCGACTCTTCAT-TTGGTTCTTCGTCTTCGTGGTGG 1142
|||||||| || ||||| ||| | || ||||||||||||||
Sbjct 414 AAAGGAGTCAACACTTCACCTTG-TGCTGCGTCTTCGTGGTGG 455
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56525813670
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5