BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg894647 Length=375 Score E Sequences producing significant alignments: (Bits) Value AT5G15330.1 | Symbols: ATSPX4, SPX4 | SPX domain gene 4 | chr5:... 196 1e-49 > AT5G15330.1 | Symbols: ATSPX4, SPX4 | SPX domain gene 4 | chr5:4980488-4982231 FORWARD LENGTH=1252 Length=1252 Score = 196 bits (106), Expect = 1e-49 Identities = 128/137 (93%), Gaps = 7/137 (5%) Strand=Plus/Minus Query 1 GTAAAGTTTCTTCGAGGTGAGTACGAAACTCTTTGCCGAATTTCATGTAGAAAAAGCCTC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 153 GTAAAGTTTCTTCGAGGTGAGTACGAAACTCTTTGCCGAATTTCATGTAGAAAAGGC-TC 95 Query 61 TGTGTTGGATCTAA-TGGAGAAGACGGAGATTGCGACGGTGAAGCAGAGCTGGCTTGGAT 119 |||||||||||||| |||||||||||||||||||||||||| ||||||| | | |||| Sbjct 94 TGTGTTGGATCTAAATGGAGAAGACGGAGATTGCGACGGTG---CAGAGCTCG-T-GGAT 40 Query 120 AAGAACGAACGCGAGAG 136 ||||||||||||||||| Sbjct 39 AAGAACGAACGCGAGAG 23 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17643979899 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5