BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg894704
Length=1392
Score E
Sequences producing significant alignments: (Bits) Value
AT5G27360.1 | Symbols: SFP2 | Major facilitator superfamily pro... 1264 0.0
AT5G27350.1 | Symbols: SFP1 | Major facilitator superfamily pro... 933 0.0
> AT5G27360.1 | Symbols: SFP2 | Major facilitator superfamily protein
| chr5:9657026-9662559 FORWARD LENGTH=1664
Length=1664
Score = 1264 bits (684), Expect = 0.0
Identities = 767/808 (95%), Gaps = 2/808 (0%)
Strand=Plus/Plus
Query 1 ATGATGGTGGAGGAGAAAGAAAGAAGCATTGAGGAAAGGCTTTTGCAGCTCAAGAACCAA 60
|||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 103 ATGATGGTGGTGGAGAAAGAAAGAAGCATAGAAGAAAGGCTTTTGCAGCTCAAGAACCAA 162
Query 61 AACGACGATTCAGATTGTCGTATCACTGCTTGTGTTATCCTTGGTACTTTCGTCGCTGTG 120
|||||||||||||| |||||||| |||||||||||||||||| |||||||| ||||||||
Sbjct 163 AACGACGATTCAGAATGTCGTATTACTGCTTGTGTTATCCTTAGTACTTTCATCGCTGTG 222
Query 121 TGTGGCTCCTTCTCCTTTGGTGTCTCTCTTGGTTATACTTCAGGTGCTGAGATAGGAATT 180
||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 223 TGTGGTTCTTTCTCCTTTGGTGTCTCTCTTGGTTATACTTCAGGTGCAGAGATAGGAATT 282
Query 181 ATGAAGGACTTGGGTCTTACAATCGCGCAATTTTCAGCATTCGCTTCATTCTCCACTTTG 240
||||||||||||| |||| | |||||||||||||||||||| |||||||| |||||||||
Sbjct 283 ATGAAGGACTTGGATCTTTCTATCGCGCAATTTTCAGCATTTGCTTCATTATCCACTTTG 342
Query 241 GGAGCTGCAATTGGTGCTTTGTTTAGCGGTAAAATGGCGATCATCCTTGGCAGAAGAAAA 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 343 GGAGCTGCAATTGGAGCTTTGTTTAGCGGTAAAATGGCGATCATCCTTGGCAGAAGAAAA 402
Query 301 ACAATGTGGGTCTCCGATCTCCTCTGCATCATTGGTTGGTTCTCCATCGCTTTCGCTAAG 360
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 403 ACAATGTGGGTGTCCGATCTCCTCTGTATCATTGGTTGGTTCTCCATCGCTTTCGCTAAG 462
Query 361 GATGTGATCTGGTTGAACTTCGGAAGAATCTCCTCAGGAATAGGACTCGGCCTAATTAGC 420
|||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 463 GATGTGATGTGGTTGAACTTCGGAAGAATCTCCTCAGGGATAGGACTCGGCTTAATTAGC 522
Query 421 TATGTGGTACCTGTCTATATAGCAGAAATTTCCCCAAAACATGTTCGTGGTACATTTACC 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 523 TATGTGGTACCTGTCTATATAGCAGAAATTTCACCAAAACATGTTCGTGGTACATTTACC 582
Query 481 TTTACAAATCAGCTTCTTCAAAACTCTGGACTCGCCATGGTTTATTTTTCGGGGAATTTT 540
|||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 583 TTTACAAATCAGCTCCTTCAAAACTCTGGACTCGCAATGGTTTATTTTTCTGGGAATTTT 642
Query 541 CTCAACTGGAGGAAATTGGCTCTATTAGGTGCTTTACCATGCTTCATTCAAGTAATCGGT 600
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 643 CTCAACTGGAGGATATTGGCTTTATTAGGTGCTTTACCATGCTTCATTCAAGTAATCGGT 702
Query 601 TTATTCTTCGTACCAGAGTCCCCAAGATGGCTGGCAAAAGTTGG-TACAGATAAAGAACT 659
|||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||
Sbjct 703 TTATTCTTCGTACCAGAGTCCCCAAGATGGCTGGCAAAAGTTGGCTCC-GATAAAGAACT 761
Query 660 AGAAAATTCACTGCTTCGGCTTAGAGGGAGAGATGCTGATATTTCACGTGAAGCCTCAGA 719
|||||||||||| ||||| ||||| ||| || ||||||||||||||||||||||||||||
Sbjct 762 AGAAAATTCACTTCTTCGTCTTAGGGGGGGAAATGCTGATATTTCACGTGAAGCCTCAGA 821
Query 720 CATTCAAGTAATGACCAAAATAGTAGAAAATGATTCAAAGTCGAGTTTTTGTGATTTGTT 779
|||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 822 CATTGAAGTTATGACCAAAATGGTAGAAAATGATTCAAAGTCGAGTTTTTGTGATTTGTT 881
Query 780 TCAGAGAAAGTATAGATATACTCTCGTG 807
|||||||| |||||||| |||||||||
Sbjct 882 CCAGAGAAAATATAGATACACTCTCGTG 909
Score = 881 bits (477), Expect = 0.0
Identities = 547/582 (94%), Gaps = 0/582 (0%)
Strand=Plus/Plus
Query 808 TTTTCAGGAAGTTCTGCTGTACTCTCTTATGCAAGTACCATTTTAAGAAAAGCTGGTTTT 867
||||||||||||||||| || ||||| ||||| |||||||||||| | ||||| ||||||
Sbjct 940 TTTTCAGGAAGTTCTGCAGTGCTCTCATATGCCAGTACCATTTTACGGAAAGCAGGTTTT 999
Query 868 TCGGTGACCGTTGGATCGACACTGCTAGGCCTCTTCATGATACCAAAAGCCATGATTGGT 927
||||||||| |||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct 1000 TCGGTGACCATTGGATCGACGCTACTAGGTCTCTTCATGATACCAAAAGCCATGATTGGT 1059
Query 928 GTCATTCTTGTTGATAAATGGGGCAGACGGCCTCTCTTGTTGACTTCTGTATCTGGGATG 987
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1060 GTCATTCTTGTCGATAAATGGGGCAGACGGCCTCTCTTGTTGACTTCTGTATCTGGGATG 1119
Query 988 TGTATAACTTCCATGCTTATTGGAGTCGCCTTCACATTACAGAAAATGCAATTGCTACAA 1047
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1120 TGCATAACTTCCATGCTTATTGGAGTCGCCTTCACATTACAGAAAATGCAATTGCTACCG 1179
Query 1048 GAACTAACTCCAGTATTCACGTTTATATGCGTTACGCTGTATATTGGAACTTTTGCAATA 1107
|| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 1180 GAGCTAACACCAGTATTCACGTTTATATGCGTTACGCTGTATATTGGAACTTATGCTATA 1239
Query 1108 GGCATGGGAGGCCTTCCTTGGGTAATTATGTCCGAGATATTTCCAATGAATATAAAAGTA 1167
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1240 GGCTTGGGAGGCCTTCCTTGGGTAATTATGTCTGAGATATTTCCAATGAATATAAAAGTA 1299
Query 1168 ACAGCAGGAAGTATAGTTACGTTAGTATCATGGTCAAGTAGTTCGATCGTCACTTACGCT 1227
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1300 ACTGCAGGAAGTATAGTAACGTTAGTATCATGGTCAAGTAGTTCGATCGTCACTTATGCT 1359
Query 1228 TTCAACTTTCTGCTCGAGTGGAGCACTCAAGGAACATTTTACGTATTTGGGGCAACCGGA 1287
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1360 TTCAACTTTCTGCTCGAGTGGAGCACTCAAGGAACATTTTACGTATTTGGAGCAGTCGGA 1419
Query 1288 GGAGTAGCATTGCTTTTTATTTGGTTGCTCGTTCCGGAAACAAAAGGATTGTCACTTGAA 1347
||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1420 GGACTAGCATTGCTTTTTATTTGGTTGCTCGTTCCGGAAACGAAAGGATTATCACTTGAA 1479
Query 1348 GAAATACAAGCTTCGCTTATTCGTCAACCTGACGGAATAAAT 1389
|||||||||||||||||||||||| | || || ||||||||
Sbjct 1480 GAAATACAAGCTTCGCTTATTCGTGAGCCCGATAGAATAAAT 1521
> AT5G27350.1 | Symbols: SFP1 | Major facilitator superfamily protein
| chr5:9648667-9654426 FORWARD LENGTH=1966
Length=1966
Score = 933 bits (505), Expect = 0.0
Identities = 716/816 (88%), Gaps = 22/816 (3%)
Strand=Plus/Plus
Query 3 GATGGTGGA-GGAGAAAGAAAGAAGCATTGAGGAAAGGCTTTTGCAGCTCAAGAACCAAA 61
|||||| || |||| ||| ||||||||| || ||| |||||||||||||||||||| |||
Sbjct 291 GATGGT-GATGGAGGAAGGAAGAAGCATAGAAGAAGGGCTTTTGCAGCTCAAGAACAAAA 349
Query 62 ACGACGATTCAGATTGTCGTATCACTGCTTGTGTTATCCTTGGTACTTTCGTCGCTGTGT 121
||||||||||||| |||||||| |||||||||||||||||| | ||||| ||||| || |
Sbjct 350 ACGACGATTCAGAGTGTCGTATTACTGCTTGTGTTATCCTTAGCACTTTTGTCGCCGTTT 409
Query 122 GTGGCTCCTTCTCCTTTGGTGTCT-CT-CTTGGTTATACTTCAGGTGCTGAGATAGGAAT 179
||||||||||||| |||||||| | || | |||||| |||||||||||||||| |||| |
Sbjct 410 GTGGCTCCTTCTCTTTTGGTGT-TGCTAC-TGGTTACACTTCAGGTGCTGAGACAGGAGT 467
Query 180 TATGAAGGACTTGGGTCTTACAATCGCGCAATTTTCAGC-ATTCGCTTCATTCTCCACTT 238
|||||||||||||| |||| | ||||||||||||||||| || || |||||| ||||||
Sbjct 468 TATGAAGGACTTGGATCTTTCTATCGCGCAATTTTCAGCTTTTGGC-TCATTCGCCACTT 526
Query 239 TGGGAGCTGCAATTGGTGCTTTGTT-TAGCGGTAAAATGGCGATCATCCTTGGCAGAAGA 297
| ||||||||||||||||| |||| | ||||||| |||| || || |||||||||||
Sbjct 527 TAGGAGCTGCAATTGGTGCACTGTTCT-GCGGTAATCTGGCAATGGTCATTGGCAGAAGA 585
Query 298 AAAACAATGTGGGTCTCCGATCTCCTCTGCATCATTGGTTGGTTCTCCATCGCTTTCGCT 357
|||||||||||||||||| |||| ||||||| ||||||| ||||||||||||| |||
Sbjct 586 GGGACAATGTGGGTCTCCGATTTCCTATGCATCACTGGTTGGCTCTCCATCGCTTTTGCT 645
Query 358 AAGGATGTGA-TCTGGTTGAACTTCGGAAGAATC-TCCTCAGGAATAGGACTCGGCCTAA 415
||||| || | | | | ||||||||||||||||| | ||||| ||||| ||||| | |
Sbjct 646 AAGGAAGT-AGTGTTGCTGAACTTCGGAAGAATCAT-TTCAGGGATAGGTTTCGGCTTGA 703
Query 416 TTAGCTATGTGGTACCTGTCTATATAGCAGAAATTTCCCCAAAACATGTTCGTGGTACAT 475
|||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||
Sbjct 704 CGAGCTATGTGGTACCTGTCTACATAGCAGAAATTACGCCAAAACATGTTCGTGGTACAT 763
Query 476 TTACCTTTACAAATCAGCTTCTTCAAAACTCTGGACTCGCCATGGTTTATTTTTCG-GGG 534
|||| ||| |||| ||||||||||||||| |||||||||||||| ||||||| | | |||
Sbjct 764 TTACGTTTTCAAACCAGCTTCTTCAAAACGCTGGACTCGCCATGATTTATTTCT-GTGGG 822
Query 535 AATTTTC-TCAAC-TGGAGGAAATTGGCTCTATTAGGTGCTTTACCATGCTTCATTCAAG 592
|| |||| || || ||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 823 AA-TTTCATC-ACTTGGAGGACGTTGGCTTTATTAGGTGCTTTACCATGCTTCATTCAAG 880
Query 593 TAATCGGTTTATTCTTCGTACCAGAGTCCCCAAGATGGCTGGCAAAAGTTGG-TACAGAT 651
||||||||||||||||||| |||||||| |||||||||||||| |||||||| | | |||
Sbjct 881 TAATCGGTTTATTCTTCGTGCCAGAGTCTCCAAGATGGCTGGCCAAAGTTGGCTCC-GAT 939
Query 652 AAAGAACTAGAAAATTCACTGCTTCGGCTTAGAGGGAGAGATGCTGATATTTCACGTGAA 711
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 940 AAAGAACTAGAAAATTCACTGTTTCGGCTTAGAGGAAGAGATGCTGATATTTCACGTGAA 999
Query 712 GCCTCAGACATTCAAGTAATGACCAAAATAGTAGAAAATGATTCAAAGTCGAGTTTTTGT 771
|||||||| |||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1000 GCCTCAGAAATTCAAGTAATGACCAAAATGGTGGAAAATGATTCAAAGTCGAGTTTTTCA 1059
Query 772 GATTTGTTTCAGAGAAAGTATAGATATACTCTCGTG 807
|||||||| ||||||||||||||||| || ||||||
Sbjct 1060 GATTTGTTCCAGAGAAAGTATAGATACACCCTCGTG 1095
Score = 643 bits (348), Expect = 0.0
Identities = 507/584 (87%), Gaps = 10/584 (2%)
Strand=Plus/Plus
Query 811 TCAGGAAGTTCTGCTGTACTCTCTTATGCAAGTACCATTTTAAGAAAAGCTGGTTTTTCG 870
||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 1129 TCAGGAAGTGCTGCTGTAATCTCTTATGCAAGTACCATTTTTAGAAAAGCTGGTTTTTCG 1188
Query 871 GTGACCGTTGGATCGAC-ACTGCTAGGCCTCTTCATGATACCAAAAGCCATGATTGGTGT 929
||| || ||||| |||| | ||||||| ||||| |||| ||||||||||||||||| |
Sbjct 1189 GTGGCCATTGGAACGACGA-TGCTAGGTATCTTCGTGATTCCAAAAGCCATGATTGGCCT 1247
Query 930 CATTCTTGTTGATAAATGGGGCAGACGGCCTCTCTTGTTGACTTCTGTATCTGGGATGTG 989
||||||||| ||||||||||||||||| |||||| || ||||||| | | ||||||| |
Sbjct 1248 CATTCTTGTCGATAAATGGGGCAGACGTCCTCTCCTGATGACTTCAGCGTTTGGGATGAG 1307
Query 990 TATAACTTCCATGCTTA-TTGGAGTCGCCTTCACATTACAGAAAATGCAATTGCTA-CAA 1047
|| |||| ||||| || |||| |||||||||||||||||||||||||||||||| |
Sbjct 1308 CATGACTTGCATGC-TACTTGGGGTCGCCTTCACATTACAGAAAATGCAATTGCTTTCG- 1365
Query 1048 GAACTAACTCCAGTATTCA-CGTTTATATGCGTTACGCTGTATATTGGAACTTTTGCAAT 1106
|||||||||||| |||| | ||||||||||||| | | ||||||||| ||||| ||||||
Sbjct 1366 GAACTAACTCCAATATT-ATCGTTTATATGCGTAATGATGTATATTGCAACTTATGCAAT 1424
Query 1107 AGGCATGGGAGGCCTTCCTTGGGTAATTATGTCCGAGATATTTCCAATGAATATAAAAGT 1166
|||| ||||||| || ||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1425 AGGCTTGGGAGGTCTACCTTGGGTAATTATGTCGGAGATATTTCCAATAAATATAAAAGT 1484
Query 1167 AACAGCAGGAAGTATAGTTACGTTAGTATCATGGTCAAGTAGTTCGATCGTCACTTACGC 1226
||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||
Sbjct 1485 AACTGCAGGAAGTATAGTTACGTTAGTCTCATTTTCAAGTAGTTCAATCGTCACTTACGC 1544
Query 1227 TTTCAACTTTCTGCTCGAGTGGAGCACTCAAGGAACATTTTACGTATTTG-GGGCAACCG 1285
||||||||||||| |||| ||||||||||||||||| |||| | |||| | ||| | | |
Sbjct 1545 TTTCAACTTTCTGTTCGAATGGAGCACTCAAGGAACGTTTTTCATATTCGCGGGTATC-G 1603
Query 1286 GAGGAGTAGCATTGCTTTTTATTTGGTTGCTCGTTCCGGAAACAAAAGGATTGTCACTTG 1345
| |||| ||| ||||||||||| |||||||||||||| ||||| |||||||| ||||| |
Sbjct 1604 GTGGAGCAGCGTTGCTTTTTATATGGTTGCTCGTTCCAGAAACGAAAGGATTATCACTCG 1663
Query 1346 AAGAAATACAAGCTTCGCTTATTCGTCAACCTGACGGAATAAAT 1389
|||||||||||| ||| ||||||| ||| || || | || ||||
Sbjct 1664 AAGAAATACAAGTTTCACTTATTCATCAGCCCGATGAAAGAAAT 1707
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68573944470
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5