BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg894792 Length=624 Score E Sequences producing significant alignments: (Bits) Value AT5G28646.1 | Symbols: WVD2 | TPX2 (targeting protein for Xklp2... 874 0.0 > AT5G28646.1 | Symbols: WVD2 | TPX2 (targeting protein for Xklp2) protein family | chr5:10674814-10677234 FORWARD LENGTH=1293 Length=1293 Score = 874 bits (473), Expect = 0.0 Identities = 575/622 (92%), Gaps = 15/622 (2%) Strand=Plus/Plus Query 1 ATGAGAAGAGAAGTTGTTGAGTCGGTGAGCACCAATGCTTCTAATGAAAGGGTTCACGTG 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 78 ATGAGAAGAGAAGTTTTTGAGTCGGTGAGCACCAATGCTTCTAATGAAAGGGTTCACGTG 137 Query 61 GCTCCCAAGATAGCTGCAGAGGAAGAAGATTATGAGGTGAAAGAATGCACTGAGGAGAAT 120 |||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||| Sbjct 138 GCTCCCAAAATAGCGGCAGAGGAACAAGATTATGAGGAGAAAGAATGCACTGAGGAGAAT 197 Query 121 TCTCTCTCTCTGAATCATAAATCTTCTAATGTAATCAGAGAGAATGATTTGAAGAAGAAG 180 |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 198 TCTCTCTCTCAGAATCATAAATCTTCTAATGTAATCACAGAGAATGATTCGAAGAAGAAG 257 Query 181 CATTTGGATGAAGAAGATGATTGTTCTGTCGCTTCTTCGGTGAAGAATGCTAAGTCTAAA 240 ||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 258 AATTTGGATGAAGAGGATGATTGTTCTGTTGCTTCTTCGATGAAGAATGCTAAGTCTAAA 317 Query 241 GTAACTCATGGAACCGCTCCCCGATTTAGGAGTGCTCAGCGAGCTGAGAAACGCAAAGAG 300 |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| Sbjct 318 GTAACTCATGGAACCGCTCCACGATTTAGGAGTGCTCAGCGCGCTGAGAAACGAAAAGAG 377 Query 301 TATTATCAAAAGCTTGAAGAGAAACACCAAGCACTTGAAGCCGAAAGGATCGAGCTTGAA 360 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 378 TATTACCAAAAGCTTGAAGAGAAACACCAAGCACTTGAAGCTGAAAGGATCGAGCTCGAA 437 Query 361 CAAAGGCAAAAGGCAAGAATCTTTTTAGAAGAACAAGAAGCAGCCATTAAACAGCTTCGG 420 ||||| ||||||| ||||| | | | ||| | |||| ||||||||||||||| Sbjct 438 CAAAGACAAAAGG-AAGAA-C-----A-A-GAA---G---CAGCTATTAAACAGCTTCGG 482 Query 421 AAAAACCTTAAGTTTAAGGCTAATCCCGTTCCCGACTTCTATTACCAAGGACCTCCCGTG 480 |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct 483 AAAAACCTTAAGTTTAAGGCTAATCCTGTTCCTGACTTCTATTACCAACGACCTCCCGTG 542 Query 481 AAACCAGAGCTTAAGAAGTTTCCTTTGACGCGTCCAAAGTCGCCGAAACTCAATCTGTCC 540 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 543 AAACCAGAGCTTAAGAAGTTTCCTCTGACGCGTCCTAAGTCGCCGAAACTCAATCTGTCC 602 Query 541 CGGAGAAAGAGCTGTAGCGATGCGATTACCTCGTCTGGTGAAGAGAATTCGAAGTCACAG 600 |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 603 AGGAGAAAGAGTTGCAGCGATGCGATTACCTCGTCTGGTGAAGAGAATTCGAACTCACAG 662 Query 601 AACCGCCACAGCGTGGTAGAAT 622 || ||||| || |||||||||| Sbjct 663 AATCGCCAGAGTGTGGTAGAAT 684 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30090254053 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5