BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg894826

Length=981
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G35630.1 | Symbols: GS2, GLN2, ATGSL1 | glutamine synthetase...   211    9e-54


> AT5G35630.1 | Symbols: GS2, GLN2, ATGSL1 | glutamine synthetase 
2 | chr5:13830429-13833451 FORWARD LENGTH=1829
Length=1829

 Score =  211 bits (114),  Expect = 9e-54
 Identities = 125/130 (96%), Gaps = 2/130 (2%)
 Strand=Plus/Plus

Query  559   GGTCCTTACTACTGTGGAGTTGGAGCTGACAAGATTTGGGGGCGTGACATTGT-AGATGC  617
             ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct  961   GGTCCTTACTACTGTGGAGTTGGAGCTGACAAGATTTGGGGGCGTGACATT-TCAGATGC  1019

Query  618   TCATTACAAAGCTTGTTTACATGCTTTAATTAACATTAGTGGTACTAATGGTGAAGTTAT  677
             ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||
Sbjct  1020  TCATTACAAAGCTTGTTTATATGCTGGAATTAACATTAGTGGTACTAATGGTGAAGTTAT  1079

Query  678   GCCTGGACAG  687
             ||||||||||
Sbjct  1080  GCCTGGACAG  1089



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 48023844532


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5