BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg894829

Length=309
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G05190.1 | Symbols:  | D-aminoacid aminotransferase-like PLP...   128    3e-29


> AT3G05190.1 | Symbols:  | D-aminoacid aminotransferase-like PLP-dependent 
enzymes superfamily protein | chr3:1471397-1475784 
FORWARD LENGTH=2147
Length=2147

 Score =  128 bits (69),  Expect = 3e-29
 Identities = 108/125 (86%), Gaps = 10/125 (8%)
 Strand=Plus/Plus

Query  182   TGGCGAAACAGAACTTCATCTTAGAAGAAAGAAGAATCAGTCTCTCCGAATTCCATACAG  241
             ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1496  TGGTGAAAGAGAACTTCATCTTAGAAGAAAGAAGAATCAGTCTCTCCGAATTCCATACAG  1555

Query  242   TTGATGAGGTTCTTTCAGGTATGGACAACATGAACTATAGCAGAACTAAGCCCGGTTGTG  301
              | |||||||      |  |  |||||||| ||||||| | |||||||||||||||||||
Sbjct  1556  CTAATGAGGT------A--T--GGACAACAGGAACTATGGGAGAACTAAGCCCGGTTGTG  1605

Query  302   AAAAT  306
             |||||
Sbjct  1606  AAAAT  1610



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 14326308465


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5