BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg894836 Length=717 Score E Sequences producing significant alignments: (Bits) Value AT5G29560.1 | Symbols: | caleosin-related family protein | chr... 787 0.0 > AT5G29560.1 | Symbols: | caleosin-related family protein | chr5:11190543-11191963 REVERSE LENGTH=663 Length=663 Score = 787 bits (426), Expect = 0.0 Identities = 483/510 (95%), Gaps = 5/510 (1%) Strand=Plus/Plus Query 1 ATGGCGACAGAT---GCAGGAGCAGATTCGATTGCTACGGTGGCTGAGAAAGCCCCCGTC 57 ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 1 ATGTCGACAGATCACGCAAGAGCAGATTCGATTGCTACGGTGGCTGAGAAAGCCCCTGTC 60 Query 58 ACGGCGGAGAGGAGAGTCCGTACTGATCTTGACGATCGCCTCCCTAAGCCATATGTGCCT 117 || |||||||||||||||||||||||||| || ||||| |||||||| |||||||||||| Sbjct 61 ACAGCGGAGAGGAGAGTCCGTACTGATCTCGATGATCGTCTCCCTAAACCATATGTGCCT 120 Query 118 CGAGCAATGGTTGCACCTGACATGGAAAACGTTAACGGGACAAGAGGACACAAGCACCAG 177 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 121 CGAGCAATGGTTGCACCAGACATGGAAAACGTTAACGGGACAAGAGGACACAAGCACCGG 180 Query 178 GACATGTCGGTTCTTCAGCAGCACGTTGCTTTCTTTGACCAGGATGGTGATGGTATCATC 237 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 181 GACATGTCGGTTCTTCAGCAACACATTGCTTTCTTTGACCAGGATGGTGATGGTATCATC 240 Query 238 TACCCATCAGAGACATTTAGAGGATTTAGAGCACTTGGTTTCAA-TGTGATCTCTAGTTT 296 |||||||||||||||||||||||||||||||||||||||||||| | || | |||||| | Sbjct 241 TACCCATCAGAGACATTTAGAGGATTTAGAGCACTTGGTTTCAACT-TGGTTTCTAGTAT 299 Query 297 CTTTCTAACAATCATTGTGCATCTTACAATGAGTTATGCTACATTGCCTACTTGGATGCC 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 CTTTCTAACAATCATTGTGCATCTTACAATGAGTTATGCTACATTGCCTACTTGGATGCC 359 Query 357 TTCTCCTACCTTCCCAATCTACATCAAGAACATCCATAGAGCCAAACATGGAAGCGATAC 416 ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| || Sbjct 360 TTCTCCTACCTTCCCGATTTACATCAAGAACATCCATAGAGCCAAACATGGAAGCGACAC 419 Query 417 CTCAACTTACGACACCGAAGGAAGGTACATTCCTGCAAATCTTGAGAACATGTTCAGTAA 476 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 420 TTCAACTTACGACACAGAAGGAAGGTACATTCCTGCAAATCTTGAGAACATGTTTAGTAA 479 Query 477 GTATGCACGTACAGTGCCTGACAAGCTAAC 506 |||||| ||||||||||||||||||||||| Sbjct 480 GTATGCCCGTACAGTGCCTGACAAGCTAAC 509 Score = 230 bits (124), Expect = 2e-59 Identities = 143/152 (94%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 567 GGCAGCGAGTAAAATGGAGTGGGGAGTACTCTACTTACTGGCCAAAGACGAGAATGGTCA 626 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 513 GGCAGCGAGTAAAATGGAGTGGGGAGTACTCTACTTCCTTGCCAAAGACGAGAATGGTCA 572 Query 627 CTTATCGAAAGAAGCTGTTC-GGAGATGCTTCGACGGGAGCTTATTCGACTACTGCGCCA 685 ||||||||||||||| || | |||||||||| ||||||||||| |||||||||||||||| Sbjct 573 CTTATCGAAAGAAGCGGT-CAGGAGATGCTTTGACGGGAGCTTGTTCGACTACTGCGCCA 631 Query 686 AGGCGAGAGCTTCTACTAAGAAGACTGAATGA 717 ||||||||||||| ||||| |||||||||||| Sbjct 632 AGGCGAGAGCTTCGACTAAAAAGACTGAATGA 663 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34762029724 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5