BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg894861 Length=501 Score E Sequences producing significant alignments: (Bits) Value AT4G06536.1 | Symbols: | SPla/RYanodine receptor (SPRY) domain... 802 0.0 > AT4G06536.1 | Symbols: | SPla/RYanodine receptor (SPRY) domain-containing protein | chr4:3360746-3361255 FORWARD LENGTH=510 Length=510 Score = 802 bits (434), Expect = 0.0 Identities = 478/500 (96%), Gaps = 0/500 (0%) Strand=Plus/Plus Query 1 ATGAAGCTGGTTTGTGAATCGGAGAAACATGAGTGGGCGAAGGAAAACAAAGTGGTTGGT 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 10 ATGAAGCTGGTTTGTGAATCGGAGAAACATGAGTGGGCAAAGGAAAACAAAGTGGTTGGT 69 Query 61 TGTGGTTACGATCCCAGGAAGAAGAAGGTTTACTTCACAGTCAACTCACACTTGGTTCAC 120 |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||| Sbjct 70 TGTGGTTACGATCCGAGGAAGAAGAAGGTTTACTTCACAGTTAACTCACACCTGGTTCAT 129 Query 121 GTCATTAACTGTAAAGCAGACGAGTTTGGGACACCTCTCTACCCCACCCTTGCTTCCAAC 180 || ||||||||||||||||||||||| ||||||||||| || ||||| |||||||||||| Sbjct 130 GTTATTAACTGTAAAGCAGACGAGTTCGGGACACCTCTATATCCCACTCTTGCTTCCAAC 189 Query 181 ACAGAGGCCACAGTTCTTGTCAACTTGGGGCAATCTCCATTTTATTACGGCCCGGCAAAC 240 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 190 ACAGAGGCCAGAGTTCTTGTCAACTTGGGGCAATCTCCATTTTATTACAGCCCGGCAAAC 249 Query 241 GGGCAGCGCACATCCAACCCATGTGCTGGTGCTGTAGCCGGGCTCGAGGACAGCAAAGAA 300 |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 250 GGGCAGCGGACATCAAACCCATGTGCTGGTGCTGTAGCCGGGCTCGAGGACAGCAAAGAG 309 Query 301 CTCTTCTCCATTGGAAGAATAGATTCTCACTATTTGAGCAATTTTTTCATTAACAGAGGA 360 ||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct 310 CTCTTCTCCATTGGAAGAATAGATTCTCACTATTTAAGTAATTTTTTCATTAACCGAGGA 369 Query 361 AATAGTGACGAGATTGCAAGCGGGAGGACCACCGTGGGAAATAGTCATAGACGTAAGCTT 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 370 AATAGTGACGAGATTGCAAGCGGGAGGGCCACCGTGGGAAATAGTCATAGACGTAAGCTT 429 Query 421 GACTATGACGAAGAATCAGATGCTGATCTTTTCGAGATTGCGCTTGAACGGTCTGGAAAA 480 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 430 GACTATGACGAAGAATCCGATGCTGATCTTTTTGAGATTGCGCTTGAACGGTCTGGAAAA 489 Query 481 CTAAATCCATCCAAGTTATA 500 |||||||| ||||||||||| Sbjct 490 CTAAATCCGTCCAAGTTATA 509 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23911453972 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5