BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg894898 Length=282 Score E Sequences producing significant alignments: (Bits) Value AT4G09012.1 | Symbols: | Mitochondrial ribosomal protein L27 |... 418 1e-116 > AT4G09012.1 | Symbols: | Mitochondrial ribosomal protein L27 | chr4:5780470-5783464 REVERSE LENGTH=527 Length=527 Score = 418 bits (226), Expect = 1e-116 Identities = 265/283 (94%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 1 ATGACATTAGGGTTGTTATT-GGGAATTGGAAGAACATTTCGAAGAAAGCGAGCTTCTTC 59 |||||||||||||||||||| ||| |||||||||||||| ||||||||| |||||||||| Sbjct 249 ATGACATTAGGGTTGTTATTCGGG-ATTGGAAGAACATTCCGAAGAAAGAGAGCTTCTTC 307 Query 60 GCTTGACATTCTCTCTCCCAAACGAGCTCCAAGAGACTTTTACAAGGGGAAAAACTGTAA 119 |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 308 GCTTGATATTCTCTCTCCCAAACGAGCTCCCAGAGACTTTTACAAGGGAAAAAACTGTAA 367 Query 120 ACCTCCTGGTTTCCACACTAGAAAAGGAGGATATGTTGTGCAGCCACATAAATTGCCAAA 179 ||||||||||||||||||| | || ||||||||||||||||||| ||||||||||||| Sbjct 368 ACCTCCTGGTTTCCACACTCG-TAA--AGGATATGTTGTGCAGCCAGATAAATTGCCAAA 424 Query 180 CTACGTAGTCCCTGATTTGACCGGCTTTAAGCTGAAACCATATGTCTCACAGTGCCCTTT 239 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| Sbjct 425 CTACGTAGTCCCTGATTTGACTGGCTTTAAGCTGAAACCATATGTATCTCAGTGCCCTTT 484 Query 240 AGACGTCAACAAAACAACCGAGTCAACTGAAGCCTCCAAGTGA 282 ||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 485 AGACGTCAACAAAACAAACGAGTCAACTGAAGCTTCCAAGTGA 527 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 12969079242 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5