BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg895002 Length=459 Score E Sequences producing significant alignments: (Bits) Value AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-L... 283 9e-76 > AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr3:9260838-9268797 REVERSE LENGTH=5946 Length=5946 Score = 283 bits (153), Expect = 9e-76 Identities = 306/378 (81%), Gaps = 18/378 (5%) Strand=Plus/Plus Query 1 ATGGTGGATATTAAAGGATGCTATCCAAGACCTTGCT-TTGATGAGTACAATGCAAAATT 59 |||||| |||| |||| ||| |||||||| ||||| | ||||||| || | || | | || Sbjct 769 ATGGTGAATATCAAAGAATGTTATCCAAGTCCTTG-TCTTGATGAATATAGTGTACAGTT 827 Query 60 GCAACTGCAGAACCGAATGTTATCTCAA-ATGATCGACCATAAAGATATCATGATTTCT- 117 |||||| || ||| |||||| ||| || |||||| |||| ||||| ||||||||| || Sbjct 828 GCAACTTCAAAACAAAATGTTGTCT-AAGATGATCAACCAGAAAGACATCATGATTCCTC 886 Query 118 AGTCTA-GATGTTGCACAAGAAAGGTT-AAGAAATAAGAAAGTACTTCTCA-TTCTTGAC 174 | | || || || ||||||||| |||| || | | ||||| || |||| | | ||||| Sbjct 887 A-TTTAGGA-GTAGCACAAGAACGGTTGAA-AGACAAGAAGGTGTTTCT-AGTACTTGAT 942 Query 175 GACGTGGATCGGTTAGCACAGTTAGATGCCTTGGCCAAAGATATTCGATGGTTTGGTCTT 234 || ||||||| ||||| ||| ||||||| ||||| ||||| | | |||||||||||| | Sbjct 943 GATGTGGATCAGTTAGGACAACTAGATGCATTGGCGAAAGAAACTAGATGGTTTGGTCCT 1002 Query 235 GGAAGTCGGATTATCATCACAACAGAAGATCGTA-GAATTTTGAAGGCACATGAG-ATCA 292 ||||||||||||||||||||||||||| ||| || || |||||| ||| ||| || |||| Sbjct 1003 GGAAGTCGGATTATCATCACAACAGAAAATC-TAAGACTTTTGATGGCTCAT-AGGATCA 1060 Query 293 ACCATATTTACAAAGTGGA-TTACCCATCAACTAATGAAGCTCTTCAAATATTTTGTATG 351 |||||||||||||||| || || | ||||||| |||| ||| ||||||| || |||||| Sbjct 1061 ACCATATTTACAAAGTAGAATTTTC-ATCAACTGATGAGGCTTTTCAAATCTTCTGTATG 1119 Query 352 AATGCCTTTGGTCAAAAG 369 ||||||||||||||||| Sbjct 1120 CATGCCTTTGGTCAAAAG 1137 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21866470815 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5