BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg895306 Length=975 Score E Sequences producing significant alignments: (Bits) Value AT4G11340.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 1280 0.0 > AT4G11340.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr4:6894208-6899130 REVERSE LENGTH=1488 Length=1488 Score = 1280 bits (693), Expect = 0.0 Identities = 911/1009 (90%), Gaps = 44/1009 (4%) Strand=Plus/Plus Query 1 GATGATGATGAATTGGTGATGAATGATGAACATCAATATCATCATCATCTAGACCTAGAC 60 |||||||||||| ||| | || ||||| | |||| | ||| ||||||||||||||||| Sbjct 424 GATGATGATGAA-TGG-G-TG-ATGATCATCATC-A-CGCATTATCATCTAGACCTAGAC 477 Query 61 AAAACTGAAATAATAGAGTGCAAAGCGGTTGCAGCGATCCGCGATTTGATCTGCCCGCGT 120 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 478 AAAACCGAAATGATAGAGTGCAAAGCGGTTGCAGCGATCCGCGATTTGATCTGCCCGCGT 537 Query 121 CTTGGAATCAT-C------C-T-------AGCGGTTGAGACACGGATTATGGTGTTGCTA 165 ||||||||||| | | | |||||| |||| || ||||||||||||||| Sbjct 538 CTTGGAATCATCCGAAGTTCTTCAGAAGGAGCGGTAGAGATACATATTATGGTGTTGCTA 597 Query 166 GTGGAAGC-G---AG---C-T--GT-G-T--TA-AG-A--TATTGG-CGATGAAGGGCAT 206 |||||||| | | | | || | | | || | |||||| || ||||||||| Sbjct 598 GTGGAAGCTGCTTGGTTTCTTGAGTCGCTGACAGAGAAGGTATTGGCCG-TGAAGGGCAG 656 Query 207 AGCTCCGCCGCAACATCAAGTGTTCGTAAGTTTCCGAGGCAGCGACGTCCGCTATAACTT 266 ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 657 AGCTCCGCCCCAACATCAAGTGTTTGTAAGTTTCCGAGGCAGCGACGTTCGCTATAACTT 716 Query 267 CTTCAGCTTTCTCAAAGATGCATTGGTAAAGAACGGTATCAATGTGGTAACGGACGAGGA 326 |||||||||||| ||||| |||||| ||||||| |||||||| ||||||||||||||||| Sbjct 717 CTTCAGCTTTCTTAAAGACGCATTGATAAAGAATGGTATCAACGTGGTAACGGACGAGGA 776 Query 327 CGCACCTAGGGGAAAACCCATCGATGAGAATCTTTTGAAGCTTATAAAAGACTCGAGGAT 386 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 777 CGCACCTAGGGGAAAACCAATCGATGAGAATCTTTTGAAGCTTATAAAAGACTCGAGGAT 836 Query 387 CGCTATTGTGATCTTCTCCGAAAACTATCCCGAATCGACTTGGTGTTTAGACGAGTTGGT 446 |||| | ||||||||||| ||||||||||| || || |||||||| |||||||||||||| Sbjct 837 CGCTGTCGTGATCTTCTCGGAAAACTATCCGGAGTCCACTTGGTGCTTAGACGAGTTGGT 896 Query 447 GGAGATCGAGAAACAAATGGACCTTAAGATGCTTGATTCTTGTCCTATCTTTTTTGAGGT 506 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 897 GGAGATCGAGAAACAAATGGATCTTAAGATGCTTGATTCTTGTCCTATCTTTTTTGAGGT 956 Query 507 TGAGACTTGTCACGTTAAACTTCAAGTCGCGAGAAGTACTTTCAACAACAATCTACTGCA 566 |||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| Sbjct 957 TGAGACTTGTCACGTTAAACTTCAGGTCGCAAGAAGTACTTTCAACTACAATCTACTGCA 1016 Query 567 GTTGGAGCATGATGAGCGGAAAAAAGCTAGGCAGATTAGTAAGAAGGCTTGGGAGGATGC 626 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1017 GTTGGAGCACGATGAGCGGAAGAAAGCTAGGCAGATTAGTAAGAAGGCTTGGGAGGATGC 1076 Query 627 AGAGAAGAGATTCGAGGGATGGAGAAAAGCTTTGATTTCGGTCTCGTCTCGCTTGGGCTT 686 ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1077 AGAGAAGAGATTCGAAGGATGGAGAAAAGCTTTGATTTCGGTCGCGTCTCGCTTGGGCTT 1136 Query 687 AACATATAAGAAGGG-A--AACCAAGCAACCTTCGTAAATGAAATCGTCCAGAAGGTTAA 743 ||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| Sbjct 1137 AACATATAAGAAGGGGAGCAACCAAGCAACCTTCGTAAATGAAATCGTCGAGAAGGTTAA 1196 Query 744 GGCAATGCTGGATAACGTTTCCTCACCACACATTGTGCCGCAACATCAAGTGTACATAAG 803 ||||||||| || |||||||||||| |||||||| ||||||||||||||| |||||||| Sbjct 1197 GGCAATGCTTGACAACGTTTCCTCATCACACATTACGCCGCAACATCAAGTTTACATAAG 1256 Query 804 TTTCCGGAGTCAAGAGATCCGCAACAAGTTCTCCAGCCTTCTTAGAGCCGCTTTACGAAG 863 ||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1257 TTTTCGGAGTCGAGAGATCCGCAACAAGTTCTCCAGCCTTCTTAGAGCCGCGTTACGAAG 1316 Query 864 GAGTGGGATCAACGTCTTTCTAGATGATGAAAATATTACTAGAATAGAGTCGAGAGACGA 923 |||||||||||||||| ||||||||||||||||||| ||| |||||||||| |||||||| Sbjct 1317 GAGTGGGATCAACGTCCTTCTAGATGATGAAAATATCACTCGAATAGAGTCAAGAGACGA 1376 Query 924 AGTTGATAGACTTTTTTGTCGAGTCTCGAGAGTCAAGGATCGAACTAGT 972 |||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 1377 AGTTGATAGACTTTTTTGTCGAGTTTCGAGAGTGAAGGATCGAACTAGT 1425 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47722439650 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5