BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg895396

Length=357
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G30993.2 | Symbols:  | Calcineurin-like metallo-phosphoester...   381    2e-105


> AT4G30993.2 | Symbols:  | Calcineurin-like metallo-phosphoesterase 
superfamily protein | chr4:15098067-15100558 FORWARD LENGTH=1615
Length=1615

 Score =  381 bits (206),  Expect = 2e-105
 Identities = 275/307 (90%), Gaps = 10/307 (3%)
 Strand=Plus/Plus

Query  44   GGTACAATAGAAAGAAAGGATTTGGATATTTCAGAGAGCGCATCACAATGCCTTTTGGTG  103
            |||||| ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct  451  GGTACACTAGAATGAAAGGATCTGGATATTTCAGAGAGCACATCAAAATGCCTTTTGGTG  510

Query  104  GATCCTTGGATGTTGTTTTTGTAGACACTGGCTCA-TTACAGCAGGAAGTGCTCGGTGGA  162
            ||||||||||||||||||| ||||||||||||||| | | ||||||||||||| ||||||
Sbjct  511  GATCCTTGGATGTTGTTTTCGTAGACACTGGCTCACTCA-AGCAGGAAGTGCTTGGTGGA  569

Query  163  GCATTGAAGAG-CTCA-AGGATCAGTCAACTGAAAGAACTT-ACAAGGATTCTAAAAGCA  219
            ||| ||||  | || | | |||||||||| ||||||   || ||||||||||||||||||
Sbjct  570  GCAGTGAA-TGCCT-ATATGATCAGTCAATTGAAAG-GGTTGACAAGGATTCTAAAAGCA  626

Query  220  GCAGATGGAGACTGGCGTATTGTGGTTGGATCAGACCCGTTACTCGCCTATACTCTAACT  279
            | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  627  GTAGACGGAGACTGGCGTATTGTGGTTGGATCAGACCCGTTACTCGCCTATACTCTAACT  686

Query  280  AAGGAAGCAGAGGAAGCC-AAGGGAATTGCAAGCACATTTGATCAAATCATGACCAAATA  338
            |||||| |||||||| || ||| || | ||||| |||||| |||||||||||||||||||
Sbjct  687  AAGGAACCAGAGGAA-CCTAAGAGAGTGGCAAGGACATTTCATCAAATCATGACCAAATA  745

Query  339  TGGAGTG  345
            |||||||
Sbjct  746  TGGAGTG  752



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 16739160417


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5