BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg895419 Length=408 Score E Sequences producing significant alignments: (Bits) Value AT4G12090.1 | Symbols: | Cornichon family protein | chr4:72421... 654 0.0 > AT4G12090.1 | Symbols: | Cornichon family protein | chr4:7242165-7242924 REVERSE LENGTH=408 Length=408 Score = 654 bits (354), Expect = 0.0 Identities = 391/409 (96%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 1 ATGGGCGATCTACTCGATTGGATTATCTCTTTCTTATTCCTCGTAACCCTTCTCATCATC 60 ||||||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||| Sbjct 1 ATGGGCGATCTACTCGATTGGATTATCTCTTTCTTATTCCTCGCAACGCTTATAATCATC 60 Query 61 GTTATTTACCAGTTGACATGTTTGGCGGATTTAGAGTTCGATCGCAGAAACCCTTACGAT 120 |||||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct 61 GTTATTTATCAGCTGACATGTTTGGCAGATTTAGAGTTCGATCGCATAAACCCTTACGAT 120 Query 121 GCATCTA-CTAAAATAAACCGGATGGTTCTACCGGAATTTGGTTTACAAGGACTTCTTTG 179 | ||||| | | ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 121 GTATCTAGC-AGAATAAACCGAATGGTTCTACCGGAATTTGGTTTACAAGGACTTCTTTG 179 Query 180 CTTATACTATATCTTAACCGGACATTGGTTCATGGCGGTTTTGTCTCTTCCCCACCTTTT 239 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 CTTATACTATATCCTAACCGGACATTGGTTCATGGCGGTTTTGTCTCTTCCCCACCTTTT 239 Query 240 CTACAACATTAGACTATACATGAAAAGGGAACATTTGGCAGACGTAACAGAGTTATACAA 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 240 CTACAACATTAGACTATACATGAAGAGGGAACATTTGGCAGACGTAACAGAGTTATACAA 299 Query 300 CACAAATAAATGGGAACAAAAGAAACGTGTGTACAAGATTGGTCATATAGCTCTCTCCAT 359 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 300 CACAAATAAATGGGAGCAAAAGAAACGAGTGTACAAGATTGGTCATATAGCTCTCTCCAT 359 Query 360 TTTTATCACATCCTATTGGTTGATCCACTCGGCATTAGGAGACATCTAA 408 |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 360 TTTTATCACAACCTATTGGTTGATCCACTCGGCATTAGGAGACATCTAA 408 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19302815616 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5