BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg895446

Length=267
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G12330.1 | Symbols: CYP706A7 | cytochrome P450, family 706, ...   329    6e-90
  AT4G12300.1 | Symbols: CYP706A4 | cytochrome P450, family 706, ...  93.5    9e-19


> AT4G12330.1 | Symbols: CYP706A7 | cytochrome P450, family 706, 
subfamily A, polypeptide 7 | chr4:7317560-7319739 REVERSE 
LENGTH=1854
Length=1854

 Score =  329 bits (178),  Expect = 6e-90
 Identities = 202/214 (94%), Gaps = 0/214 (0%)
 Strand=Plus/Plus

Query  52    TATTTCCCATTTGGATCTGGCCGGAGAATTTGTGCGGGAATGGCCATGGCAGAGAGAGTG  111
             |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||| 
Sbjct  1417  TATTTCCCGTTTGGATCTGGCCGGAGAATTTGTGCGGGAATGGCCATGGCCGAGAAAGTT  1476

Query  112   GTTCTTTACAATCTTGCAACGCTTTTGAATTCTTTTGATTGGAAAATTGGGGAAGGAGAG  171
             ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct  1477  GTTCTTTACAATCTTGCAACGCTTTTGCATTCTTTTGATTGGAGAATTGGGGAAGGAGAG  1536

Query  172   AAAGTGGAGCTCGAGGAGAAGTTTGGGATTGTGTTGAAGTTGAAGAATCCACTTGTTGAA  231
             |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
Sbjct  1537  AAAGTGGAGCTCGAGGAGAAGTTTGGGATTTTATTGAAGTTGAAGAATCCACTTGTTGCA  1596

Query  232   ACACCCGTGCTAAGGTTCTCGGATCCAAATCTTT  265
             |||||||||||||| || ||||||||||| ||||
Sbjct  1597  ACACCCGTGCTAAGATTGTCGGATCCAAACCTTT  1630


> AT4G12300.1 | Symbols: CYP706A4 | cytochrome P450, family 706, 
subfamily A, polypeptide 4 | chr4:7307737-7309755 REVERSE 
LENGTH=1893
Length=1893

 Score = 93.5 bits (50),  Expect = 9e-19
 Identities = 143/186 (77%), Gaps = 14/186 (8%)
 Strand=Plus/Plus

Query  51    CTATTTCCCATTTGGATCTGGCCGGAGAATTTGTGCGGGAATGGC-CATGGCAGAGAG-A  108
             |||||| ||||||||||||||||||||||||||||| ||  | || | | || ||||| |
Sbjct  1392  CTATTTTCCATTTGGATCTGGCCGGAGAATTTGTGCCGGTGTAGCAC-TCGCCGAGAGGA  1450

Query  109   GTGGTTCTT-TACAATCTTGCAACGCTTTTGAATTCTTTTGATTGGAAAATTGGGGAAGG  167
              ||||| || |||| ||| || || || ||| |||| || |||||||| ||   ||||||
Sbjct  1451  -TGGTT-TTATACACTCTCGCGACACTATTGCATTCGTTCGATTGGAAGATACCGGAAGG  1508

Query  168   AGA-GAAAGT-GGAGCTCGAG-GAGAAGTTTGGGATTGTGTTGAAGTTGAAGAATCCA-C  223
               | |   || |||  | ||  ||||||||||||||||| |||||| | |||| |||  |
Sbjct  1509  CCACGT--GTTGGATTT-GAAAGAGAAGTTTGGGATTGTCTTGAAGCTCAAGA-TCCCTC  1564

Query  224   TTGTTG  229
             ||||||
Sbjct  1565  TTGTTG  1570



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12215063007


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5