BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg895521
Length=1944
Score E
Sequences producing significant alignments: (Bits) Value
AT4G04500.1 | Symbols: CRK37 | cysteine-rich RLK (RECEPTOR-like... 2959 0.0
AT4G04490.1 | Symbols: CRK36 | cysteine-rich RLK (RECEPTOR-like... 813 0.0
AT4G04510.1 | Symbols: CRK38 | cysteine-rich RLK (RECEPTOR-like... 603 3e-171
AT4G27290.1 | Symbols: | S-locus lectin protein kinase family ... 52.8 1e-05
> AT4G04500.1 | Symbols: CRK37 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 37 | chr4:2238411-2240865 FORWARD LENGTH=2039
Length=2039
Score = 2959 bits (1602), Expect = 0.0
Identities = 1824/1929 (95%), Gaps = 23/1929 (1%)
Strand=Plus/Plus
Query 1 ATGGGAAAGAGTGGTGTTGTGACTAGTTCCCTCTCGCTTCTCCTTTTCTTCCTTCAAACC 60
|||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1 ATGGGAAAGAGTTGTGTTGTGACTAGTTCCTTCTCGCTTCTCCTTCTCTTCCTTCAAACC 60
Query 61 CTAAAATATGTTCATGCCGGTTCCATCTGCTACGGCGACTTTTTTAATGTTAACTACGGC 120
|||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||
Sbjct 61 CTAAAATATGTTCATGCCGGTTTCATTTGCTACGGCGACTTTTTCAATGTTAACTACGGC 120
Query 121 GTCAGTCGAAAC-TATCTCTTCTCTTCTCTTCCTTCTAACGTCGTTGATAACGGCGGTTT 179
|||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 121 GTCAGTCG-AACGTATCTCTTCTCTTCTCTTCCTTCTAACGTCGTTTCTAACGGCGGTTT 179
Query 180 CTACAACGCATCGTTTGGCAGAGATTCCAAAAACAACAGAGTCCACGTTGTTGCCTTATG 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 CTACAACGCATCGTTTGGCAGAGATTCCAAAAACAACAGAGTCCACGTTGTTGCCTTATG 239
Query 240 CAGACGAGGCTACGAGGAGCAAGCTTGTAAGACATGTCTCGAACATGTGATTGAAGACAC 299
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 CAGACGAGGCTACGAGAAGCAAGCTTGTAAGACATGTCTCGAACATGTGATTGAAGACAC 299
Query 300 AAAAGCCAAGTGTCCTCGCCAAAAAGAGTCATTCTCGTGGGTCACTGATGAATTCGACGA 359
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 300 AAAATCCAAGTGTCCTCGCCAAAAAGAGTCTTTCTCGTGGGTCACTGATGAATTCGACGA 359
Query 360 CGTTTCTTGCTCTCTACGTTACACCAACCACTCAACTCTTGGCAAACTCAATCTCTCACC 419
||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||
Sbjct 360 CGTTTCTTGCTCTCTACGTTACACCAACCACTCAACTCTTGGCAAACTCGAGCTCTTACC 419
Query 420 AAGTACTATTAACCCTAACCCAAACAGTATAGATTCCAAATTCAACAACATGACCATGTT 479
|| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 420 AAATACTATTAACCCTAACCCTAACAGTATAGATTCCAAATTCAACAACATGGCCATGTT 479
Query 480 CAGCCAAGAATGGATTGCAATGGTTAACCGGACGCTCGAGGTTGCTTCTACCGTTGAGAC 539
||||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||||
Sbjct 480 CAGCCAAGAATGGATTGCAATGGTTAACCGGACACTCGAGGCTGCTTCCACCGCTGAGAA 539
Query 540 TTCCTCAGTCCTTAAGTACTATAGTGCCACAAGAACAGAGTTCACACAAATTTCAGATGT 599
||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct 540 TTCCTCAGTCCTTAAGTACTACAGCGCAACAAGAACAGAGTTCACACAAATTTCAGATGT 599
Query 600 TTATGCGTTGATGCAATGCGTGCCTGATTTATCGCCAGGCAACTGCAAGAGATGTCTTAG 659
||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 600 TTACGCGTTGATGCAGTGCGTGCCTGATCTATCGCCAGGCAACTGCAAGAGATGTCTTAG 659
Query 660 AGAGTGTGTGAATGACTTTCAGAAGCAGTATTGGGGAAGACAAGGAGGTGGGATTAGCCG 719
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||
Sbjct 660 AGAGTGTGTGAATGACTTTCAGAAGCAGTTTTGGGGAAGACAAGGAGGTGGGGTTAGTCG 719
Query 720 GCCTAGCTGTTATTTCCGGTGGGATCTTTATCCTTTCTATAGAGCTTTTGAAAATGTTAC 779
||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||
Sbjct 720 GCCTAGCTGTTATTTCCGGTGGGATCTTTATCCGTACTACAGAGCTTTTGACAATGTTGT 779
Query 780 GAGAGTTCCTGCTCCTCCTCCACAAGCTTCTTCGACTATTCTCGATTACGGGAGAGACAA 839
|||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| |
Sbjct 780 AAGAGTTCCTGCTCCTCCTCCTCAAGCTTCTTCTACTATTATCGATTACGGGAGAGACGA 839
Query 840 GCAAAGTTTTCAAGGAAGCAACATAGCAATTATTGTGGTGCCTACAGTCATCAATCTCTT 899
| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
Sbjct 840 GAAAAGTTTTCAAGGAAGCAACATAGCAATTATTGTGGTCCCTTCAGTCATCAATCTCAT 899
Query 900 CATATTTGTGGTTCTAATATTTTCTTGGAAGAGAAGAAAGCCA-TCACACACCGGAATCA 958
||||||||||||||||||||| |||||| | || |||||| || ||||||||| |||||
Sbjct 900 CATATTTGTGGTTCTAATATTCTCTTGG-A-AG-AGAAAG-CAGTCACACACCATAATCA 955
Query 959 ATGA-G-----G-CTC--TTGATGGTCAATCTATGTTACGTTTTGATCTTCGAATGATTC 1009
|||| | | || | ||||||||||||||||||||||||||||||||||||||
Sbjct 956 ATGATGTTTTTGATTCAAATAATGGTCAATCTATGTTACGTTTTGATCTTCGAATGATTG 1015
Query 1010 TAACTGCAACCAATAACTTCTCTCTAGAAAATAAGCTTGGCCAAGGTGGATTTGGATCTG 1069
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1016 TAACTGCAACCAATAACTTCTCTCTTGAAAATAAGCTTGGCCAAGGTGGATTTGGATCTG 1075
Query 1070 TCTACAAGGGAATATTACCGAGCGGACAAGAGATAGCGGTAAAGAGATTAACAAAAGGTT 1129
||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct 1076 TCTACAAGGGAATATTACCAAGCGGGCAAGAGATAGCGGTAAAGAGATTAAGAAAAGGTT 1135
Query 1130 CAGGGCAAGGAGGTATGGAGTTCAAGAACGAGGTCTTACTCTTGACAAGACTCCAACATA 1189
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 CAGGACAAGGAGGTATGGAGTTCAAGAACGAGGTCTTACTCTTGACAAGACTCCAACATA 1195
Query 1190 GGAATCTGGTTAAGCTTCTTGGGTTTTGTAATGAAAAAGATGAAGAAATTCTTGTCTACG 1249
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1196 GGAATCTGGTTAAGCTTCTTGGGTTTTGTAATGAAAAAGATGAAGAGATTCTTGTCTACG 1255
Query 1250 AATTCGTCCCTAATTCAAGCCTCGACCACTTCATATTCGATGAAGAAAAACGCCG-GCTT 1308
| || ||||| ||||||||||| |||||||||||||||||||||||||||||||| | ||
Sbjct 1256 AGTTTGTCCCCAATTCAAGCCTTGACCACTTCATATTCGATGAAGAAAAACGCCGAG-TT 1314
Query 1309 CTGACATGGGATGTGAGGTACAGAATCATAGAAGGAGTTGCAAGAGGGCTTCTTTATCTC 1368
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1315 CTGACATGGGATGTGAGGTATACAATCATAGAAGGAGTTGCAAGAGGGCTTCTTTATCTC 1374
Query 1369 CATGAAGATTCTCAGTTGAGGATTATTCACAGAGATTTGAAGGCAAGCAATATCCTGTTA 1428
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1375 CATGAAGATTCTCAGTTGAGGATTATACACAGAGATTTGAAGGCAAGCAATATCCTTTTA 1434
Query 1429 GACGCGGAGATGAACCCTAAGGTTGCAGACTTTGGGATGGCAAGGCTGTTCGATATGGAC 1488
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1435 GACGCGGAGATGAACCCTAAGGTTGCAGATTTTGGGATGGCAAGGCTGTTCGATATGGAC 1494
Query 1489 GAGACTCGAGGACAGACAAGCAGAGTGGTTGGAACATATGGATATATGGCTCCAGAATAC 1548
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1495 GAGACTCGAGGACAGACAAGCAGAGTAGTTGGAACATATGGATATATGGCTCCAGAATAC 1554
Query 1549 GCGACATATGGACAATTCTC-AGCTAAATCTGATGTTTATAGCTTTGGTGTCATGCTTCT 1607
|||||||| ||||||||||| | | |||||||||||||||||||||||||||||||||||
Sbjct 1555 GCGACATACGGACAATTCTCGA-CAAAATCTGATGTTTATAGCTTTGGTGTCATGCTTCT 1613
Query 1608 AGAGATGATAAGTGGTAAAAGCAATAAAAATTTGGAAAaagaagaagaggaagaagaaga 1667
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1614 AGAGATGATAAGTGGTAAAAGCAACAAAAAGTTGGAAAAAGAAGAAGAGGAAGAAGAAGA 1673
Query 1668 -G--CTTCCAGCTTTTGTGTGGAAGAGGTGGCTTGAAGGAAGATTTGCAGAGATCATTGA 1724
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1674 AGAGCTTCCAGCTTTTGTGTGGAAGAGGTGGATTGAAGGAAGATTTGCAGAGATCATTGA 1733
Query 1725 TCCTTTGGCTGCTCCGAGTAACAATATCTCAATGAACCAAGTAATGAAGCTCATCCACAT 1784
||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||
Sbjct 1734 TCCTTTGGCTGCTCCGAGTAACAATATCTCAATAAACGAAGTAATGAAGCTCATTCACAT 1793
Query 1785 AGGTTTGTTGTGTGTTCAAGAAAATGTTTCCAAAAGACCTAGCATTAATTCAATCCTCTT 1844
||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1794 AGGTTTGTTGTGTGTTCAAGAGGATATTTCCAAAAGACCTAGCATTAATTCAATCCTCTT 1853
Query 1845 TTGGCTTGAAAGACACGCTACTACCACAATGCCTGTGCCCACGCCTGTTGCTTATCTTAC 1904
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1854 TTGGCTTGAGAGACACGCTACTATCACAATGCCTGTGCCCACGCCTGTTGCTTATCTTAC 1913
Query 1905 GCGACCATC 1913
|||||||||
Sbjct 1914 GCGACCATC 1922
> AT4G04490.1 | Symbols: CRK36 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 36 | chr4:2231957-2234638 REVERSE LENGTH=1977
Length=1977
Score = 813 bits (440), Expect = 0.0
Identities = 609/690 (88%), Gaps = 14/690 (2%)
Strand=Plus/Plus
Query 969 TGATGGTCAATCTATGTTACGTTTTGATCTTCGAATGATTC-TAACTGCAACCAATAACT 1027
|||||||||| ||| |||| | ||||||||| | |||| || ||| |||||||||| | |
Sbjct 960 TGATGGTCAAGCTACGTTAAGATTTGATCTTGGCATGA-TCTTAATTGCAACCAATGAGT 1018
Query 1028 TCTCTCTAGAAAATAAGCTTGGCCAAGGTGGATTTGGATCTGTCTACAAGGGAATATTAC 1087
|||| || |||||||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct 1019 TCTCCCTTGAAAATAAGCTTGGACAAGGTGGGTTTGGATCTGTCTACAAGGGGATATTAC 1078
Query 1088 CGAGCGGACAAGAGATAGCGGTAAAGAGATTAACAAAAGGTTCAGGGCAAGGAGGTA-TG 1146
||||||| |||||||||||||||||||||||| | ||| ||||| |||||| | | |
Sbjct 1079 CGAGCGGGCAAGAGATAGCGGTAAAGAGATTAGCTGGAGGCTCAGGACAAGGA-GAACTA 1137
Query 1147 GAGTTCAAGAACGAGGTCTTACTCTTGACAAGACTCCAACATAGGAATCTGGTTAAGCTT 1206
||||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1138 GAGTTTAAGAATGAAGTCTTACTCTTGACAAGACTCCAACATAGGAATCTAGTTAAGCTT 1197
Query 1207 CTTGGGTTTTGTAATGAA-AAAGATGAAGAAATTCTTGTCTACGA--ATTCGTCCCTAAT 1263
||||| || ||||||||| || ||||||| |||||||||||||| | | |||||||||
Sbjct 1198 CTTGGATTCTGTAATGAAGGAA-ATGAAGAGATTCTTGTCTACGAGCA-T-GTCCCTAAT 1254
Query 1264 TCAAGCCTCGACCACTTCATATTCGATGAAGAAAAACGCCGGCTTCTGACATGGGATGTG 1323
||||| || || ||||| || || || ||||| ||||| ||||||| ||||||||||||
Sbjct 1255 TCAAGTCTTGATCACTTTATCTTTGACGAAGACAAACGTTGGCTTCTTACATGGGATGTG 1314
Query 1324 AGGTACAGAATCATAGAAGGAGTTGCAAGAGGGCTTCTTTATCTCCATGAAGATTCTCAG 1383
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1315 AGGTACAGAATCATAGAAGGAGTTGCAAGAGGACTTCTTTATCTCCATGAAGATTCTCAG 1374
Query 1384 TTGAGGATTATTCACAGAGATTTGAAGGCAAGCAATATCCTGTTAGACGCGGAGATGAAC 1443
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1375 TTGAGGATTATTCACAGAGATTTGAAGGCAAGCAATATCCTTTTAGACGCGGAGATGAAC 1434
Query 1444 CCTAAGGTTGCAGACTTTGGGATGGCAAGGCTGTTCGATATGGACGAGACTCGAGGACAG 1503
||||| |||||||||||||||||||| ||| |||| | ||||| |||||||||||| ||
Sbjct 1435 CCTAAAGTTGCAGACTTTGGGATGGCGAGGTTGTTTAACATGGATGAGACTCGAGGAGAG 1494
Query 1504 ACAAGCAGAGTGGTTGGAACATATGGATATATGGCTCCAGAATACGCGACATATGGACAA 1563
||||||||||| |||||||| || |||||||||||||| || |||| || | ||||||||
Sbjct 1495 ACAAGCAGAGTAGTTGGAACCTACGGATATATGGCTCCGGAGTACGTGAGACATGGACAA 1554
Query 1564 TTCTCAGCTAAATCTGATGTTTATAGCTTTGGTGTCATGCTTCTAGAGATGATAAGTGGT 1623
||||||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||
Sbjct 1555 TTCTCAGCTAAATCTGATGTTTATAGCTTCGGTGTTATGCTTTTGGAGATGATAAGTGGT 1614
Query 1624 -AAAAGCAATAAAAA-TTTGGAAAaagaag 1651
|||| ||||| || |||| ||| |||||
Sbjct 1615 GAAAAA-AATAAGAACTTTG-AAACAGAAG 1642
> AT4G04510.1 | Symbols: CRK38 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 38 | chr4:2242122-2244930 FORWARD LENGTH=2221
Length=2221
Score = 603 bits (326), Expect = 3e-171
Identities = 923/1199 (77%), Gaps = 89/1199 (7%)
Strand=Plus/Plus
Query 466 AACATGACCATGTTCAGCCAAGAAT-GGATTGCAATGGTTAACCGGACGCTCGAGGTTGC 524
||||||||| | ||| ||||||||| ||| ||||||||| ||||||||||||||| ||
Sbjct 451 AACATGACCCTTTTCCGCCAAGAATGGGA-AGCAATGGTTGACCGGACGCTCGAGGCTG- 508
Query 525 TTCTACCGTTGAGACTTCCTC-A--GTCCTTAAGTACTATAGTGC-CACAAGAACAGAGT 580
| ||| |||| | |||| | | || || ||||| || |||| | ||| | ||||||
Sbjct 509 -T-AACCATTGACAATTCCACAACGGTTCTCAAGTATTACGGTGCTCTCAA-ATCAGAGT 565
Query 581 TCACACAAATTT-CAGATGTTTATGCGTTGATGCAATGCGTGCCTGATTTATCGCCAGGC 639
||| | ||| || |||| ||| | ||||||||||| || || || |||||
Sbjct 566 TCA-GTGAGTTTCCAAATGTATATATGATGATGCAATGCACACCCGACATAAATTCAGGC 624
Query 640 AAC-TGCAAGAGATGTCTTAG--AGAGTGTGTGA-ATGACTTTCAGA-AGCAGTATTGGG 694
| |||||||||||| || | || || || | || | ||| ||| | ||| ||||||
Sbjct 625 -GCGTGCAAGAGATGT-TT-GCAAGCGTCCGTTACAT-A-TTTTAGAGACCAGAATTGGG 679
Query 695 GAAGACAAGGAGGTGGGATTAGCCGGCCTAGCTGT-TATTTCCGGTGGGA-TCTTTAT-C 751
| ||||||||||| |||||| | || || |||||| | |||| ||||||| | ||||| |
Sbjct 680 GCAGACAAGGAGGCGGGATTTGTCGACCGAGCTGTGT-TTTCAGGTGGGAGT-TTTATCC 737
Query 752 CTTTCTATAGAGCTTTTGAAAATGTTACGAGAGTTCCTGCTCCTCCTCCACAAGCTTCTT 811
|||| || | ||||||| ||||| || |||||||| || |||||| | ||| | ||
Sbjct 738 CTTT-TACGGCGCTTTTGCTAATGTAACAAGAGTTCCAGCGCCTCCT---CGAGC-T-TT 791
Query 812 CGACTATTCTCGATTACGGGAG--A-GACAAGCA-AAGTTTTCAAGGAAGCAA-CATAGC 866
|| | | ||||| || | || | | | || | || |||| || || || ||
Sbjct 792 -GA-T-TCCTCGA--ACAGAAGCAATCTCCATCACTCGCTTGAAAGG-AGGAATTATCGC 845
Query 867 AATTA-TTGTGGTGCCTA-CAGTCATCAATC-TCTTCATATTTGT-GGT-T-CT-A-A-T 917
|| || ||||||| |||| | ||||| |||| || || | ||| | ||| | | | |
Sbjct 846 AA-TATTTGTGGTTCCTATC-GTCATTAATCTTC-TCGTCTTTATCGGTCTGATCAGAGC 902
Query 918 ATTTTCTTGGAAGAGAAGAAAGCCATCACACACCGGAATCAATGAGGCTC--T-TG---A 971
|| | | | | | | |||||| ||| ||| ||||||||||||||| | | || |
Sbjct 903 ATATAC-TCG-A-ATAAGAAA---ATCGTACAACGGAATCAATGAGGCGCAATATGATTA 956
Query 972 ---TGGTCAATCTATGTTACGTTTTGATCTTCGAATGATTCTAACTGCAACCAATAACTT 1028
|||||| |||| | |||| || ||| |||| ||||| ||||| |||||| || | ||
Sbjct 957 TGGTGGTCAGTCTAAGCTACGGTTCGATTTTCGCATGATCCTAACGGCAACCGATGATTT 1016
Query 1029 CT-CTCTAGAAAATAAGCTTGGCCAAGGTGGATTTGGATCTGTCTACAA-GGGAATATTA 1086
| || | ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1017 TTCCT-TTGAAAATAAGATTGGCCAAGGTGGATTTGGATCTGTCTACAAGGGGAA-ATTA 1074
Query 1087 CCGAGCGGACAAGAGATAGCGGTAAAGAGATTAACAAAAGGTTCAGGGCAAGGAG-GTAT 1145
||| | || |||||||||||||||| |||||||||| ||| ||||| ||||||| | ||
Sbjct 1075 CCGGGAGGGGAAGAGATAGCGGTAAAAAGATTAACAAGAGGCTCAGGACAAGGAGAG-AT 1133
Query 1146 GGAGTTCAAG-AACGAGGTCTTACTCTTGACAAGACTCCAACATAGGAATCTGGTTAAGC 1204
||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1134 AGAGTT-TAGAAACGAGGTCTTACTCTTGACAAGACTCCAACATAGGAATCTAGTTAAGC 1192
Query 1205 TTCTTGGGTTTTGTAATGAAAAAGATGAAGAAATTCTTGTCTACGAATTCGTCCCTAATT 1264
||||||| |||||||||||| |||||||| |||||||| ||||| || ||||| ||||
Sbjct 1193 TTCTTGGATTTTGTAATGAAGGCGATGAAGAGATTCTTGTTTACGAGTTTGTCCCCAATT 1252
Query 1265 CAAGCCTCGACCACTTCATATTCGATGAAGAAAAACGCCGGCTTCTGACATGGGATGTGA 1324
|||||||||||||||||||||| |||||||| || || |||||| || ||||| |||
Sbjct 1253 CAAGCCTCGACCACTTCATATTTGATGAAGAGAAGCGTTTGCTTCTAACGTGGGACATGA 1312
Query 1325 G-GTACAGAATCATAGAAGGAGTTGCAAGAGGGCTTCTTTATCTCCATGAAGATTCTCAG 1383
| | |||||| |||||||| ||||| |||| ||| ||||| | || ||||||||||||
Sbjct 1313 GAGC-CAGAATTATAGAAGGCGTTGCGCGAGGTCTTGTTTATTTACACGAAGATTCTCAG 1371
Query 1384 TTGAGGATTATTCACAGAGATTTGAAGGCAAGCAATATCCTGTTAGACGCGGAGATGAAC 1443
||||||| |||||| |||| ||||| |||||||||||||| ||||| || | ||||||
Sbjct 1372 CTGAGGATAATTCACCGAGACTTGAAAGCAAGCAATATCCTTTTAGATGCATATATGAAC 1431
Query 1444 CCTAAGGTTGCAGACTTTGGGATGGCAAGGCTGTTCGATATGGACGAGACTCGAGGACAG 1503
||||| |||||||||||||||||||| ||| ||||| | |||||| ||||||||| | |
Sbjct 1432 CCTAAAGTTGCAGACTTTGGGATGGCGAGGTTGTTCAACATGGACCAGACTCGAGCAGTG 1491
Query 1504 ACAAGCAGAGTGGTTGGAACATATGGATATATGGCTCCAGAATACGCGAC-ATATGGA-C 1561
||||| | ||| |||||||| | ||| ||||||||||| || |||| | | | || |
Sbjct 1492 ACAAGAAAAGTAGTTGGAACCTTTGGCTATATGGCTCCCGAGTACGTTAGGA-ACAGAAC 1550
Query 1562 AATTCTCAG-CTAA-ATCTGATGTTTATAGCTTTGGTGTCATGCTTCTAGAGATGATAA 1618
| || |||| | || | | || ||||| ||||| || ||| ||||||| ||||||||||
Sbjct 1551 ATTT-TCAGTC-AAGA-CAGACGTTTACAGCTTCGGAGTCGTGCTTCTCGAGATGATAA 1606
> AT4G27290.1 | Symbols: | S-locus lectin protein kinase family
protein | chr4:13666281-13669202 FORWARD LENGTH=2352
Length=2352
Score = 52.8 bits (28), Expect = 1e-05
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 1509 CAGAGTGGTTGGAACATATGGATATATG 1536
||||||||||||||||||||||||||||
Sbjct 1875 CAGAGTGGTTGGAACATATGGATATATG 1902
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96284645310
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5