BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg895629
Length=690
Score E
Sequences producing significant alignments: (Bits) Value
AT4G05050.1 | Symbols: UBQ11 | ubiquitin 11 | chr4:2588004-2589... 1037 0.0
AT4G05320.2 | Symbols: UBQ10 | polyubiquitin 10 | chr4:2718170-... 881 0.0
AT4G02890.3 | Symbols: UBQ14 | Ubiquitin family protein | chr4:... 843 0.0
AT5G20620.1 | Symbols: UBQ4 | ubiquitin 4 | chr5:6973071-697494... 588 3e-167
AT5G03240.1 | Symbols: UBQ3 | polyubiquitin 3 | chr5:771752-773... 566 1e-160
AT1G65350.1 | Symbols: UBQ13 | ubiquitin 13 | chr1:24272518-242... 551 3e-156
AT2G36170.1 | Symbols: | Ubiquitin supergroup;Ribosomal protei... 220 1e-56
AT2G35635.1 | Symbols: UBQ7, RUB2 | ubiquitin 7 | chr2:14980970... 148 5e-35
> AT4G05050.1 | Symbols: UBQ11 | ubiquitin 11 | chr4:2588004-2589386
REVERSE LENGTH=1049
Length=1049
Score = 1037 bits (561), Expect = 0.0
Identities = 649/692 (94%), Gaps = 4/692 (1%)
Strand=Plus/Plus
Query 1 ATGCAGATCTTCGTTAAAACTCTCACCGGAAAGACTATCACCCTTGAGGTGGAAAGCTCT 60
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 93 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGCTCT 152
Query 61 GACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 120
|||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct 153 GACACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAAGGTATTCCTCCGGATCAG 212
Query 121 CAGAGGCTTATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGTTGGCTGATTACAAC 180
||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 213 CAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGCACGTTGGCGGATTACAAT 272
Query 181 ATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTATGCAGATTTTC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 273 ATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTATGCAGATTTTC 332
Query 241 GTCAAGACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCCGACACCATTGAC 300
|| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 333 GTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCTGACACCATTGAC 392
Query 301 AACGTAAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAGCAGAGGTTGATC 360
||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct 393 AACGTCAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCGGACCAGCAGAGGTTGATC 452
Query 361 TTCGCCGGAAAACAG-TTGGAGGATGGTC-GTACCTTGGCGGATTACAACATCCAGAAGG 418
||||||||||| || ||| |||| || | | || |||||||||||||||||||||||||
Sbjct 453 TTCGCCGGAAAGCAACTTG-AGGACGG-CAGAACTTTGGCGGATTACAACATCCAGAAGG 510
Query 419 AGTCGACCCTTCACTTGGTGTTGCGTCTCCGTGGAGGTATGCAGATCTTCGTCAAGACTT 478
|||| || ||||| ||||| |||||||| ||||||||||||||||||||||| |||||||
Sbjct 511 AGTCTACGCTTCATTTGGTCTTGCGTCTGCGTGGAGGTATGCAGATCTTCGTAAAGACTT 570
Query 479 TGACCGGAAAGACCATCACCCTTGAAGTGGAGAGCTCCGACACCATTGACAACGTGAAGG 538
||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct 571 TGACCGGAAAGACCATCACTCTTGAAGTTGAGAGCTCCGACACCATTGATAACGTGAAGG 630
Query 539 CTAAGATCCAGGACAAGGAAGGTATCCCTTTGGACCAGCAGCGTCTCATCTTCGCTGGAA 598
|||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||
Sbjct 631 CTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCAGCAGCGTCTCATCTTCGCTGGAA 690
Query 599 AGCAGCTTGAGGATGGTCGCACTTTGGCCGATTACAACATCCAGAAAGAGTCTACTCTTC 658
|||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||
Sbjct 691 AGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAACATCCAGAAGGAGTCTACTCTTC 750
Query 659 ACTTGGTCCTCCGTCTCCGTGGTGGTTTTTAA 690
|||||||||||||||||||||||||||| |||
Sbjct 751 ACTTGGTCCTCCGTCTCCGTGGTGGTTTCTAA 782
Score = 460 bits (249), Expect = 6e-129
Identities = 392/461 (85%), Gaps = 10/461 (2%)
Strand=Plus/Plus
Query 229 ATGCAGATTTTCGTCAAGACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCC 288
|||||||| ||||| ||||| || || |||||||| || || || |||||||| |||||
Sbjct 93 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGCTCT 152
Query 289 GACACCATTGACAACGTAAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAG 348
|||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| |||
Sbjct 153 GACACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAAGGTATTCCTCCGGATCAG 212
Query 349 CAGAGG-TTGATCTTCGCCGGAAAACAGTTGGAGGATGGTCGTACCTTGGCGGATTACAA 407
|||||| || |||||||||||||| |||||||||||||| || || ||||||||||||||
Sbjct 213 CAGAGGCTT-ATCTTCGCCGGAAAGCAGTTGGAGGATGGCCGCACGTTGGCGGATTACAA 271
Query 408 CATCCAGAAGGAGTCGACCCTTCACTTGGTGT-TGC-GTCTCCGTGGAGGTATGCAGATC 465
||||||||||| || ||||| |||||||| | | | | |||||||| |||||||||||
Sbjct 272 TATCCAGAAGGAATCCACCCTCCACTTGGT-TCT-CAGGCTCCGTGGTGGTATGCAGATT 329
Query 466 TTCGTCAAGACTTTGACCGGAAAGACCATCACCCTTGAAGTGGAGAGCTCCGACACCATT 525
||||| || || | || |||||||| || || ||||| ||||||||||| |||||||||
Sbjct 330 TTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCTGACACCATT 389
Query 526 GACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTTTGGACCAGCAGCG-TCT 584
|||||||| ||||| |||||||| || ||||| ||||| ||| |||||||||| | | |
Sbjct 390 GACAACGTCAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCGGACCAGCAGAGGT-T 448
Query 585 CATCTTCGCTGGAAAGCAGCTTGAGGATGGTC-GCACTTTGGCCGATTACAACATCCAGA 643
|||||||| |||||||| |||||||| || | | |||||||| ||||||||||||||||
Sbjct 449 GATCTTCGCCGGAAAGCAACTTGAGGACGG-CAGAACTTTGGCGGATTACAACATCCAGA 507
Query 644 AAGAGTCTACTCTTCACTTGGTCCTCCGTCTCCGTGGTGGT 684
| |||||||| ||||| |||||| | ||||| ||||| |||
Sbjct 508 AGGAGTCTACGCTTCATTTGGTCTTGCGTCTGCGTGGAGGT 548
Score = 233 bits (126), Expect = 1e-60
Identities = 196/230 (85%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 1 ATGCAGATCTTCGTTAAA-ACTCTCACCGGAAAGACTATCACCCTTGAGGTGGAAAGCTC 59
||||||||||||| |||| ||| | ||||||||||| ||||| ||||| || || |||||
Sbjct 549 ATGCAGATCTTCG-TAAAGACTTTGACCGGAAAGACCATCACTCTTGAAGTTGAGAGCTC 607
Query 60 TGACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCA 119
|||||||| || ||||| || || |||||||||||||||||||||||||||||||| ||
Sbjct 608 CGACACCATTGATAACGTGAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCA 667
Query 120 GCAGAGGCTTATTTTCGCCGGAAAGCAG-TTGGAGGATGGCCGTACGTTGGCTGATTACA 178
|||| | || || ||||| ||||||||| ||| ||||||| ||||| ||||| || ||||
Sbjct 668 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTG-AGGATGGACGTACTTTGGCCGACTACA 726
Query 179 ACATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGT 228
||||||||||||| || || || |||||||| ||| | ||||||||||||
Sbjct 727 ACATCCAGAAGGAGTCTACTCTTCACTTGGTCCTCCGTCTCCGTGGTGGT 776
> AT4G05320.2 | Symbols: UBQ10 | polyubiquitin 10 | chr4:2718170-2720308
FORWARD LENGTH=1835
Length=1835
Score = 881 bits (477), Expect = 0.0
Identities = 625/696 (90%), Gaps = 12/696 (2%)
Strand=Plus/Plus
Query 1 ATGCAGATCTTCGTTAAAACTCTCACCGGAAAGACTATCACCCTT-GAGGTGGAAAGCTC 59
|||||||||||||| || ||||||||||||||||| |||| | || |||||||| || ||
Sbjct 770 ATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACCATCA-CTTTGGAGGTGGAGAGTTC 828
Query 60 TGACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCA 119
||||||||| || ||||| |||||||||||||||||||| || || || || ||||| ||
Sbjct 829 TGACACCATTGATAACGTGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCA 888
Query 120 GCAGAGGCTT-ATTTTCGCCGGAAAGC-AGTTGGAGGATGGCCGTACGTTGGCTGATTAC 177
||||| | || || ||||||||||||| | || || ||||| | || |||||||| |||
Sbjct 889 GCAGA-GATTGATCTTCGCCGGAAAGCAACTT-GAAGATGGAAGAACTTTGGCTGACTAC 946
Query 178 AACATCCAGAAGGAATCCACCCTCCACTTGGTTC-T-CAGGCTCCGTGGTGGTATGCAGA 235
||||| |||||||| ||||| || ||||||| || | | | || ||||| ||||||||||
Sbjct 947 AACATTCAGAAGGAGTCCACACTTCACTTGG-TCTTGC-GTCTGCGTGGAGGTATGCAGA 1004
Query 236 TTTTCGTCAAGACCCTAACGGGAAAGACGATTACTCTT-GAGGTGGAGAGCTCCGACACC 294
| ||||| ||||| || || |||||||| || ||| || ||||| |||||||| ||||||
Sbjct 1005 TCTTCGTGAAGACTCTCACCGGAAAGACTATCACT-TTGGAGGTAGAGAGCTCTGACACC 1063
Query 295 ATTGACAACGTAAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAGCAGAGG 354
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1064 ATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAAGGAATCCCTCCGGACCAGCAGAGG 1123
Query 355 TTGATCTTCGCCGGAAAACAGTTGGAGGATGGTCGTACCTTGGCGGATTACAACATCCAG 414
|||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1124 TTGATCTTTGCCGGAAAACAATTGGAGGATGGTCGTACTTTGGCGGATTACAACATCCAG 1183
Query 415 AAGGAGTCGACCCTTCACTTGGTGTTGCGTCTCCGTGGAGGTATGCAGATCTTCGTCAAG 474
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1184 AAGGAGTCGACCCTTCACTTGGTGTTGCGTCTGCGTGGAGGTATGCAGATCTTCGTCAAG 1243
Query 475 ACTTTGACCGGAAAGACCATCACCCTTGAAGTGGAGAGCTCCGACACCATTGACAACGTG 534
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1244 ACTTTGACCGGAAAGACCATCACCCTTGAAGTGGAAAGCTCCGACACCATTGACAACGTC 1303
Query 535 AAGGCTAAGATCCAGGACAAGGAAGGTATCCCTTTGGACCAGCAGCGTCTCATCTTCGCT 594
||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 1304 AAGGCCAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAGCAGCGTCTCATCTTCGCT 1363
Query 595 GGAAAGCAGCTTGAGGATGGTCGCACTTTGGCCGATTACAACATCCAGAAAGAGTCTACT 654
|||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||
Sbjct 1364 GGAAAGCAGCTTGAGGATGGACGTACTTTGGCCGACTACAACATCCAGAAGGAGTCTACT 1423
Query 655 CTTCACTTGGTCCTCCGTCTCCGTGGTGGTTTTTAA 690
|||||||||||||| ||||| ||||||||||| |||
Sbjct 1424 CTTCACTTGGTCCTGCGTCTTCGTGGTGGTTTCTAA 1459
Score = 787 bits (426), Expect = 0.0
Identities = 606/692 (88%), Gaps = 16/692 (2%)
Strand=Plus/Plus
Query 1 ATGCAGATCTTCGTTAAAACTCTCACCGGAAAGACTATCACCCTTGAGGTGGAAAGCTCT 60
||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct 86 ATGCAGATCTTTGTTAAGACTCTCACCGGAAAGACAATCACCCTCGAGGTGGAAAGCTCC 145
Query 61 GACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 120
|||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct 146 GACACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAGGGCATTCCTCCGGATCAG 205
Query 121 CAGAGGCTTATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGTTGGCTGATTACAAC 180
|||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||
Sbjct 206 CAGAGGCTTATTTTCGCCGGCAAGCAGCTAGAGGATGGCCGTACGTTGGCTGATTACAAT 265
Query 181 ATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTATGCAGATTTTC 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 266 ATCCAGAAGGAATCCACCCTCCACTTGGTCCTCAGGCTCCGTGGTGGTATGCAGATTTTC 325
Query 241 GTCAAGACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCCGACACCATTGAC 300
|| || |||||||||||||||||||||||||||||||||||||| || |||||||| |||
Sbjct 326 GTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTCTGACACCATCGAC 385
Query 301 AACGTAAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAGCAGAGGTTGATC 360
||||| |||||||||||||| || || || ||||| |||||||||||||||||| |||||
Sbjct 386 AACGTCAAGGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAGCAGAGGCTGATC 445
Query 361 TTCGCCGGAAAACAGTTGGAGGATGGTC-GTAC-CTTGGCGGATTACAACATCCAGAAGG 418
||||||||||| |||||||||||||| | | || |||| | || ||||| ||||||||||
Sbjct 446 TTCGCCGGAAAGCAGTTGGAGGATGG-CAGAACTCTTG-CTGACTACAATATCCAGAAGG 503
Query 419 AGTCGACCCTTCA-CTTGGTGTT-GCGTCTCCGTGGAGGTATGCAGATCTTCGTCAAGAC 476
|||| |||||||| |||| | | | | |||||||| ||||||||||| ||||| |||||
Sbjct 504 AGTCCACCCTTCATCTTGTTCTCAG-G-CTCCGTGGTGGTATGCAGATTTTCGTTAAGAC 561
Query 477 TTTGACCGG-AAAGACCATCACCCTTGAAG-TGGAGAGCTCCGACACCATTGACAACGTG 534
||||| || ||| || ||||| ||| || ||||||| || ||||||||||| ||||||
Sbjct 562 GTTGACTGGGAAA-ACTATCACT-TTGGAGGTGGAGAGTTCTGACACCATTGATAACGTG 619
Query 535 AAGGCTAAGATCCAGGACAAGGAAGGTATCCCTTTGGACCAGCAGCG-TCTCATCTTCGC 593
|| || |||||||| ||||| || ||||| ||| |||||||||| | | | ||||||||
Sbjct 620 AAAGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAGCAGAGAT-TGATCTTCGC 678
Query 594 TGGAAAGCAGCTTGAGGATGGTC-GCACTTTGGCCGATTACAACATCCAGAAAGAGTCTA 652
||||| || ||||| ||||| | | ||||||||||| |||||||| ||||| ||||| |
Sbjct 679 CGGAAAACAACTTGAAGATGG-CAGAACTTTGGCCGACTACAACATTCAGAAGGAGTCCA 737
Query 653 CTCTTCACTTGGTCCTCCGTCTCCGTGGTGGT 684
| || ||||||||| | ||||| ||||| |||
Sbjct 738 CACTCCACTTGGTCTTGCGTCTGCGTGGAGGT 769
Score = 693 bits (375), Expect = 0.0
Identities = 590/693 (85%), Gaps = 18/693 (3%)
Strand=Plus/Plus
Query 1 ATGCAGATCTTCGTTAAAACTCTCACCGGAAAGACTATCACCCTTGAGGTGGAAAGCTCT 60
|||||||| ||||||||||| || || |||||||| || || ||||||||||| || |||
Sbjct 314 ATGCAGATTTTCGTTAAAACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTCT 373
Query 61 GACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 120
||||||||||||||||| || ||||||||||| ||||| || || ||||||||||| |||
Sbjct 374 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAG 433
Query 121 CAGAGGCTTATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGT-TGGCTGATTACAA 179
|||||||| || ||||||||||||||||||||||||||| | || | | ||||| |||||
Sbjct 434 CAGAGGCTGATCTTCGCCGGAAAGCAGTTGGAGGATGGCAGAAC-TCTTGCTGACTACAA 492
Query 180 CATCCAGAAGGAATCCACCCTCCA-CTTGGTTCTCAGGCTCCGTGGTGGTATGCAGATTT 238
||||||||||| |||||||| || ||| |||||||||||||||||||||||||||||||
Sbjct 493 TATCCAGAAGGAGTCCACCCTTCATCTT-GTTCTCAGGCTCCGTGGTGGTATGCAGATTT 551
Query 239 TCGTCAAGACCCTAAC-GGGAAAGACGATTACTCTTG-AGGTGGAGAGCTCCGACACCAT 296
|||| ||||| | || |||||| || || ||| ||| |||||||||| || ||||||||
Sbjct 552 TCGTTAAGACGTTGACTGGGAAA-ACTATCACT-TTGGAGGTGGAGAGTTCTGACACCAT 609
Query 297 TGACAACGT-AAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAGCAGAGGT 355
||| ||||| |||| |||||||||| || || || ||||| ||||||||||||||||| |
Sbjct 610 TGATAACGTGAAAG-CCAAGATCCAAGACAAAGAGGGTATTCCTCCGGACCAGCAGAGAT 668
Query 356 TGATCTTCGCCGGAAAACAG-TTGGAGGATGGTC-GTACCTTGGCGGATTACAACATCCA 413
||||||||||||||||||| ||| || |||| | | || ||||| || |||||||| ||
Sbjct 669 TGATCTTCGCCGGAAAACAACTTGAAG-ATGG-CAGAACTTTGGCCGACTACAACATTCA 726
Query 414 GAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTCCGTGGAGGTATGCAGATCTTCGTCAA 473
||||||||| || || |||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct 727 GAAGGAGTCCACACTCCACTTGGTCTTGCGTCTGCGTGGAGGTATGCAGATCTTCGTGAA 786
Query 474 GACTTTGACCGGAAAGACCATCACCCTTGAAG-TGGAGAGCTCCGACACCATTGACAACG 532
|||| | ||||||||||||||||| ||| || ||||||| || ||||||||||| ||||
Sbjct 787 GACTCTCACCGGAAAGACCATCACT-TTGGAGGTGGAGAGTTCTGACACCATTGATAACG 845
Query 533 TGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTTTGGACCAGCAGCG-TCTCATCTTC 591
|||| || |||||||||||||| || |||||||| |||||||||| | | | ||||||
Sbjct 846 TGAAAGCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCAGCAGAGAT-TGATCTTC 904
Query 592 GCTGGAAAGCAGCTTGAGGATGGTCGCACTTTGGCCGATTACAACATCCAGAAAGAGTCT 651
|| |||||||| ||||| ||||| | |||||||| || |||||||| ||||| |||||
Sbjct 905 GCCGGAAAGCAACTTGAAGATGGAAGAACTTTGGCTGACTACAACATTCAGAAGGAGTCC 964
Query 652 ACTCTTCACTTGGTCCTCCGTCTCCGTGGTGGT 684
|| |||||||||||| | ||||| ||||| |||
Sbjct 965 ACACTTCACTTGGTCTTGCGTCTGCGTGGAGGT 997
> AT4G02890.3 | Symbols: UBQ14 | Ubiquitin family protein | chr4:1278530-1280028
REVERSE LENGTH=1499
Length=1499
Score = 843 bits (456), Expect = 0.0
Identities = 614/690 (89%), Gaps = 12/690 (2%)
Strand=Plus/Plus
Query 1 ATGCAGATCTTCGTTAAAACTCTCACCGGAAAGACTATCACCCTTGAGGTGGAAAGCTCT 60
||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 365 ATGCAGATCTTTGTTAAGACTCTCACCGGAAAGACTATCACCCTCGAGGTGGAAAGCTCT 424
Query 61 GACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 120
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 425 GACACCATCGACAACGTTAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAG 484
Query 121 CAGAGGCTTATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGTTGGCTGATTACAAC 180
||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct 485 CAGAGGCTTATTTTCGCCGGAAAACAGCTAGAGGATGGCCGTACGTTGGCTGATTACAAT 544
Query 181 ATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTATGCAGATTTTC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 545 ATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTATGCAGATTTTC 604
Query 241 GTCAAGACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCCGACACCATTGAC 300
||||||||| |||||||||||||||||||||||||||||||||| || |||||||| |||
Sbjct 605 GTCAAGACCTTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTCTGACACCATCGAC 664
Query 301 AACGTAAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAGCAGAGGTTGATC 360
||||| |||||||||||||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct 665 AACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAGCAGAGGTTGATC 724
Query 361 TTCGCCGGAAAACAGTTGGAGGATGGTC-GTAC-CTTGGCGGATTACAACATCCAGAAGG 418
||||| ||||| |||||||||||||| | | || |||| | || ||||||||||||||||
Sbjct 725 TTCGCTGGAAAGCAGTTGGAGGATGG-CAGAACTCTTG-CTGACTACAACATCCAGAAGG 782
Query 419 AGTCGACCCTTCA-CTTGGTGTT-GCGTCTCCGTGGAGGTATGCAGATCTTCGTCAAGAC 476
|||| || ||||| |||| | | | | |||||||| |||||||||||||| ||||||||
Sbjct 783 AGTCCACACTTCATCTTGTTCTCAG-G-CTCCGTGGTGGTATGCAGATCTTTGTCAAGAC 840
Query 477 TTTGACCGGAAAGACCATCACCCTTGAAG-TGGAGAGCTCCGACACCATTGACAACGTGA 535
||||| |||||||| ||||| ||| || |||||||||| ||||| || ||||| || |
Sbjct 841 GTTGACTGGAAAGACTATCACT-TTGGAGGTGGAGAGCTCTGACACTATCGACAATGTCA 899
Query 536 AGGCTAAGATCCAGGACAAGGAAGGTATCCCTTTGGACCAGCAGCG-TCTCATCTTCGCT 594
| || |||||||||||||| || |||||||| |||||||||| | | | ||||||||
Sbjct 900 AAGCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCAGCAGAGAT-TGATCTTCGCC 958
Query 595 GGAAAGCAGCTTGAGGATGGTCGCACTTTGGCCGATTACAACATCCAGAAAGAGTCTACT 654
||||| || ||||| |||||| | |||||||| || |||||||| ||||| ||||||||
Sbjct 959 GGAAAACAACTTGAAGATGGTAGAACTTTGGCTGACTACAACATTCAGAAGGAGTCTACA 1018
Query 655 CTTCACTTGGTCCTCCGTCTCCGTGGTGGT 684
||||||||||| | ||||||||||| |||
Sbjct 1019 CTTCACTTGGTGTTGCGTCTCCGTGGAGGT 1048
Score = 798 bits (432), Expect = 0.0
Identities = 612/698 (88%), Gaps = 16/698 (2%)
Strand=Plus/Plus
Query 1 ATGCAGATCTTCGTTAA-AACTCTCACCGGAAAGACTATCACCCTTGAGGTGGAAAGCTC 59
|||||||| ||||| || | || | || |||||||| || || ||||||||||| || ||
Sbjct 593 ATGCAGATTTTCGTCAAGACCT-TAACGGGAAAGACGATTACTCTTGAGGTGGAGAGTTC 651
Query 60 TGACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCA 119
|||||||||||||||||| || ||||||||||| |||||||| || ||||||||||| ||
Sbjct 652 TGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 711
Query 120 GCAGAGGCTT-ATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGT-TGGCTGATTAC 177
||||||| || || ||||| ||||||||||||||||||||| | || | | ||||| |||
Sbjct 712 GCAGAGG-TTGATCTTCGCTGGAAAGCAGTTGGAGGATGGCAGAAC-TCTTGCTGACTAC 769
Query 178 AACATCCAGAAGGAATCCACCCTCCA-CTTGGTTCTCAGGCTCCGTGGTGGTATGCAGAT 236
|||||||||||||| ||||| || || ||| |||||||||||||||||||||||||||||
Sbjct 770 AACATCCAGAAGGAGTCCACACTTCATCTT-GTTCTCAGGCTCCGTGGTGGTATGCAGAT 828
Query 237 -TTTCGTCAAGACCCTAACGGGAAAGACGATTACTCTT-GAGGTGGAGAGCTCCGACACC 294
||| |||||||| | || |||||||| || ||| || |||||||||||||| |||||
Sbjct 829 CTTT-GTCAAGACGTTGACTGGAAAGACTATCACT-TTGGAGGTGGAGAGCTCTGACACT 886
Query 295 ATTGACAACGT-AAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAGCAGAG 353
|| ||||| || ||| |||||||||||||| || || |||||||| ||||||||||||||
Sbjct 887 ATCGACAATGTCAAA-GCCAAGATCCAGGACAAAGAGGGTATCCCACCGGACCAGCAGAG 945
Query 354 GTTGATCTTCGCCGGAAAAC-AGTTGGAGGATGGTCGTACCTTGGCGGATTACAACATCC 412
||||||||||||||||||| | || || |||||| | || ||||| || |||||||| |
Sbjct 946 ATTGATCTTCGCCGGAAAACAACTT-GAAGATGGTAGAACTTTGGCTGACTACAACATTC 1004
Query 413 AGAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTCCGTGGAGGTATGCAGATCTTCGTCA 472
|||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1005 AGAAGGAGTCTACACTTCACTTGGTGTTGCGTCTCCGTGGAGGTATGCAGATTTTCGTGA 1064
Query 473 AGACTTTGACCGGAAAGACCATCACCCTTGAAGTGGAGAGCTCCGACACCATTGACAACG 532
||||| | || ||||||||||| || |||||||| |||||||||||||||||||||||||
Sbjct 1065 AGACTCTCACTGGAAAGACCATTACTCTTGAAGTTGAGAGCTCCGACACCATTGACAACG 1124
Query 533 TGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTTTGGACCAGCAGCGTCTCATCTTCG 592
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1125 TGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAGCAGCGTCTCATCTTCG 1184
Query 593 CTGGAAAGCAGCTTGAGGATGGTCGCACTTTGGCCGATTACAACATCCAGAAAGAGTCTA 652
||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct 1185 CTGGAAAACAGCTTGAGGATGGTCGTACTTTGGCCGACTACAACATCCAGAAGGAGTCTA 1244
Query 653 CTCTTCACTTGGTCCTCCGTCTCCGTGGTGGTTTTTAA 690
| ||||||||||| || | |||||||||||||| |||
Sbjct 1245 CCCTTCACTTGGTGCTAAGGCTCCGTGGTGGTTTCTAA 1282
> AT5G20620.1 | Symbols: UBQ4 | ubiquitin 4 | chr5:6973071-6974946
REVERSE LENGTH=1491
Length=1491
Score = 588 bits (318), Expect = 3e-167
Identities = 573/695 (82%), Gaps = 22/695 (3%)
Strand=Plus/Plus
Query 1 ATGCAGATCTTCGTTAAAACTCTCACCGGAAAGACTATCACCCTTGAGGTGGAAAGCTCT 60
||||| || ||||| ||||| ||||| || ||||| ||||| || ||||| || ||||||
Sbjct 99 ATGCAAATTTTCGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTCT 158
Query 61 GACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 120
|||||||||||||| ||||| || ||||||||||||||||||||||||||||| || |||
Sbjct 159 GACACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 218
Query 121 CAGAGGCTT-ATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGTTGGCTGATTACAA 179
|| || || || ||||| || |||||| | || |||||||| || ||||||||||||||
Sbjct 219 CAAAGA-TTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGCACCTTGGCTGATTACAA 277
Query 180 CATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTATGCAGAT-TT 238
||||||||| ||||| || |||||||||||||||||| | | |||||||||||||| ||
Sbjct 278 CATCCAGAAAGAATCAACACTCCACTTGGTTCTCAGGTTAAGAGGTGGTATGCAGATCTT 337
Query 239 TCGTCAAGACCCTAACGGG-AAAGACGATTACTCTTG-AGGTGGAGAGCTCCGACACCAT 296
| |||||||| || || || ||| || ||||| |||| |||| || ||||| ||||| ||
Sbjct 338 T-GTCAAGACTCTGACTGGCAAA-ACCATTAC-CTTGGAGGTTGAAAGCTCTGACACTAT 394
Query 297 TGACAACGTAAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAGCAGAGG-T 355
||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| || |
Sbjct 395 TGACAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAGCAAAGACT 454
Query 356 TGATCTTCGCCGGAAAACAG-TTGGAGGATGGTCGTAC-CTTGGCGGATTACAACATCCA 413
| || ||||| || || ||| ||| || |||| | || |||| | || ||||| |||||
Sbjct 455 T-ATTTTCGCTGGTAAGCAGCTTGAAG-ATGGAAGGACTCTTG-CTGACTACAATATCCA 511
Query 414 GAAGGAGTCGACCCTTCAC-TTGGTG-TTGCGTCTCCGTGGAGGTATGCAGATCTTCGTC 471
|||||||| || |||||| ||| | || ||||||||||| |||||||| ||||| ||
Sbjct 512 AAAGGAGTCTACTCTTCACCTTG-TCCTT-CGTCTCCGTGGTGGTATGCAAATCTTTGTG 569
Query 472 AAGACTTTGACCGG-AAAGACCATCACCCTTGAAGTGGAGAGCTCCGACACCATTGACAA 530
|||||| |||| || ||| || ||||||||||| || |||||||| ||||||||||||||
Sbjct 570 AAGACTCTGACGGGTAAA-ACAATCACCCTTGAGGTTGAGAGCTCAGACACCATTGACAA 628
Query 531 CGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTTTGGACCAGCAGCGTCTCATCTT 590
|| || ||||||||||| || || || || ||||| |||||||||| | || |||||
Sbjct 629 TGTCAAAGCTAAGATCCAAGATAAAGAGGGAATCCCACCGGACCAGCAGAGGCTTATCTT 688
Query 591 CGCTGGAAAGCAGCTTGAGGATGGTCGCACT-TTGGCCGATTACAACATCCAGAAAGAGT 649
|| || |||||||| ||||||||||||||| ||| | |||||||||||||| |||||||
Sbjct 689 TGCCGGTAAGCAGCTAGAGGATGGTCGCACTCTTG-CTGATTACAACATCCAAAAAGAGT 747
Query 650 CTACTCTTCACTTGGTCCTCCGTCTCCGTGGTGGT 684
| || ||||| ||||| || ||||| | ||||||
Sbjct 748 CAACCCTTCATTTGGTGCTTCGTCTGAGAGGTGGT 782
> AT5G03240.1 | Symbols: UBQ3 | polyubiquitin 3 | chr5:771752-773363
REVERSE LENGTH=1237
Length=1237
Score = 566 bits (306), Expect = 1e-160
Identities = 571/697 (82%), Gaps = 26/697 (4%)
Strand=Plus/Plus
Query 1 ATGCAGATCTTCGTTAAAACTCTCACCGGAAAGACTATCACCCTTGAGGTGGAAAGCTCT 60
||||| |||||||| ||||| ||||| || ||||||||||| || ||||| || ||||||
Sbjct 93 ATGCAAATCTTCGTGAAAACACTCACTGGCAAGACTATCACTCTCGAGGTTGAGAGCTCT 152
Query 61 GACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAG 120
|||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct 153 GACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGATCAG 212
Query 121 CAGAGGCTTATT-TTCGCCGG-AAAGCAGTTGGAGGATGGCCGTACGTTGGCTGATTACA 178
|| || ||| | |||||||| ||| ||| | || ||||||||||| ||||| |||||||
Sbjct 213 CAAAGA-TTAATATTCGCCGGTAAA-CAGCTAGAAGATGGCCGTACCTTGGCCGATTACA 270
Query 179 ACATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTATGCAGAT-T 237
|||| ||||| ||||| ||||| || ||||||||| | | | ||||||||||| || |
Sbjct 271 ACATTCAGAAAGAATCAACCCTTCATTTGGTTCTCCGTTTAAGAGGTGGTATGCAAATCT 330
Query 238 TTCGTCAAGACCCTAACGGGAAAGACGATTACTCTTG-AGGTGGAGAGCTCCGACACCAT 296
|| |||||||| || || || ||||| |||||| ||| |||| |||||||| ||||| ||
Sbjct 331 TT-GTCAAGACTCTGACTGGCAAGACCATTACT-TTGGAGGTTGAGAGCTCTGACACTAT 388
Query 297 TGACAACGT-AAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAGCAGAGG- 354
||||||||| |||| | ||||||||||| |||||||| ||||||||||| ||||||||
Sbjct 389 TGACAACGTCAAAG-CAAAGATCCAGGACAAGGAAGGAATCCCTCCGGATCAGCAGAGAC 447
Query 355 TTGATCTTCGCCGGAAAACAG-TTGGAGGATGGTCGTAC-CTTGGCGGATTACAACATCC 412
|| ||||| ||||| || ||| ||| || | || | || |||| | || |||||||| |
Sbjct 448 TT-ATCTTTGCCGGTAAGCAGCTTGAAG-ACGGAAGAACTCTTG-CTGACTACAACATTC 504
Query 413 AGAAGGAGTCGACCCTTCACTTGGTG-TTGCGTCTCCGTGGAGGTATGCAGATCTTCGTC 471
| ||||||||||||||||| |||||| || |||||| | || |||||||| ||||| |||
Sbjct 505 AAAAGGAGTCGACCCTTCATTTGGTGCTT-CGTCTCAGAGGTGGTATGCAAATCTTTGTC 563
Query 472 AAGACTTTGACCGG-AAAGACCATCACCCTTGAAGTGGAGAGCTCCGACACCATTGACAA 530
||||| | || || ||| || ||||||||||| || ||||| || ||||||||||||||
Sbjct 564 AAGACCCTCACTGGTAAA-ACAATCACCCTTGAGGTTGAGAGTTCAGACACCATTGACAA 622
Query 531 CGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTTTGGACCAGCAGCGTCTCATCTT 590
|| || ||||||||||| || || || || || ||| ||| |||||| | || |||||
Sbjct 623 TGTCAAAGCTAAGATCCAAGATAAAGAGGGAATTCCTCCGGATCAGCAGAGGCTTATCTT 682
Query 591 CGCTGGAAAGCAGCTTGAGGATGGTCGCACT-TTGGCCGATTACAACATCCAGAAAG-AG 648
|| || |||||||| || ||||| ||||| ||| | |||||||||||||| |||| ||
Sbjct 683 TGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTG-CAGATTACAACATCCA-AAAGGAG 740
Query 649 TCTACTCTTCA-CTTGGTCCTCCGTCTCCGTGGTGGT 684
|| || ||||| |||| | || |||||||||||||||
Sbjct 741 TCGACACTTCATCTTG-TGCTTCGTCTCCGTGGTGGT 776
> AT1G65350.1 | Symbols: UBQ13 | ubiquitin 13 | chr1:24272518-24277275
REVERSE LENGTH=960
Length=960
Score = 551 bits (298), Expect = 3e-156
Identities = 570/698 (82%), Gaps = 31/698 (4%)
Strand=Plus/Plus
Query 1 ATGCAGATCTTCGTTAAAACTCTCACCGG-AAAGACTATCACCCTT-GAGGTGGAAAGCT 58
|||||||| || || || ||| | || || ||| || |||| | || ||||| ||||| |
Sbjct 1 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAA-ACCATCA-CTTTGGAGGTTGAAAGTT 58
Query 59 CTGACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGGATC 118
|||| || || ||||| ||||| || ||||||||||| |||||||| || ||||||||||
Sbjct 59 CTGATACTATTGACAATGTTAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATC 118
Query 119 AGCAGAGGCTTAT-TTTCGCCGGAAAGCAG-TTGGAGGATGGCCGTACGTTGGCTGATTA 176
||||||||||||| ||| ||||| |||||| || || || || || || | ||||||||
Sbjct 119 AGCAGAGGCTTATCTTT-GCCGGTAAGCAGCTT-GAAGACGGTCGCACACTCGCTGATTA 176
Query 177 CAACATCCAGAAGGAATCCACCCTCCACTTGGTTC-TCAGGCTCCGTGGTGGTATGCAGA 235
||||||||| ||||| ||||||||||| ||||| | || | ||| | |||||||||||||
Sbjct 177 CAACATCCAAAAGGAGTCCACCCTCCATTTGGTGCTTC-GTCTCAGAGGTGGTATGCAGA 235
Query 236 T-TTTCGTCAAGACCCTAACGGGAAAGACGATTACTCTT-GAGGTGGAGAGCTCCGACAC 293
| ||| || |||||||| || |||||||| || ||| || ||||| |||||||| |||||
Sbjct 236 TATTT-GTGAAGACCCTCACTGGAAAGACAATCACT-TTGGAGGTTGAGAGCTCAGACAC 293
Query 294 CATTGACAACGTAAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAGCAGAG 353
||| || ||||| ||||| ||||| ||||| |||||||||||||| || ||||| |||||
Sbjct 294 CATCGATAACGTGAAGGCTAAGATTCAGGACAAGGAAGGTATCCCACCAGACCAACAGAG 353
Query 354 GTTGATCTTCGCCGGAAAACAG-TTGGAGGATGGTCGTAC-CTTGGCGGATTACAACATC 411
| |||||||| || |||||| || ||||||||||| || ||| || | |||| |||
Sbjct 354 ACTCATCTTCGCTGGGAAACAGCTT-GAGGATGGTCGCACACTT-GC---TGACAATATC 408
Query 412 CAGAAGGAGTCGACCCTTCA-CTTGGTGTTGCGTCTCCGTGGAGGTATGCAGATCTTCGT 470
||||||||||| || ||||| ||| ||||||||||| ||||| |||||||| ||||| ||
Sbjct 409 CAGAAGGAGTCTACGCTTCACCTT-GTGTTGCGTCTTCGTGGTGGTATGCAAATCTTTGT 467
Query 471 CAAGACTTTGACCGGAAAGACCATCACCCTT-GAAGTGGAGAGCTCCGACACCATTGACA 529
|| |||||||| || |||||||| | |||| || || |||||||| ||||| ||||| |
Sbjct 468 GAAAACTTTGACAGGCAAGACCATTA-CCTTGGAGGTTGAGAGCTCAGACACAATTGATA 526
Query 530 ACGTGAAGGCTAAGATCCAGGACAAGGAA-GGTATCCCTTTGGACCAGCAGCGTCTCATC 588
| || || |||||||| ||||| |||||| || ||||| ||||| ||| | ||||||
Sbjct 527 ATGTCAAAGCTAAGATTCAGGATAAGGAATGG-ATCCCACCAGACCAACAGAGACTCATC 585
Query 589 TTCGCTGG-AAAGCAGCTTGAGGATGGTCGCACTTTGGCCGATTACAACATCCAGAAAGA 647
|| ||||| ||| ||||| |||||||| | |||||||| ||||||||||||||||||||
Sbjct 586 TTTGCTGGTAAA-CAGCTCGAGGATGGAAGGACTTTGGCTGATTACAACATCCAGAAAGA 644
Query 648 GTCTACTCTTCAC-TTGGTCCTCCGTCTCCGTGGTGGT 684
||||||||||||| ||| | | ||||| |||||||||
Sbjct 645 GTCTACTCTTCACCTTG-TATTGCGTCTTCGTGGTGGT 681
Score = 76.8 bits (41), Expect = 2e-13
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 166 TTGGCTGATTACAACATCCAGAAGGAATCCACCCTCCACTTGGTTCT-CAGGCTCCGTGG 224
||||||||||||||||||||||||||||| || || ||||||||||| | | || |||||
Sbjct 889 TTGGCTGATTACAACATCCAGAAGGAATCGACTCTTCACTTGGTTCTTC-GTCTTCGTGG 947
Query 225 TGG 227
|||
Sbjct 948 TGG 950
> AT2G36170.1 | Symbols: | Ubiquitin supergroup;Ribosomal protein
L40e | chr2:15172094-15173280 FORWARD LENGTH=680
Length=680
Score = 220 bits (119), Expect = 1e-56
Identities = 172/198 (87%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 229 ATGCAGATTTTCGTCAAGACCCTAACGGGAAAGACGATTACTCTTGAGGTGGAGAGCTCC 288
|||||||||||||| || || ||||| || ||||| || || || ||||| ||||||
Sbjct 60 ATGCAGATTTTCGTGAAAACGCTAACCGGCAAGACCATCACCCTCGAGGTCGAGAGCAGT 119
Query 289 GACACCATTGACAACGTAAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAG 348
|||||||| ||||| || ||||||||||||||||| || ||||| || ||||||||||||
Sbjct 120 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCTCCGGACCAG 179
Query 349 CAGAGGTTGATCTTCGCCGGAAAACAG-TTGGAGGATGGTCGTACCTTGGCGGATTACAA 407
||||||||||||||||||||||||||| ||| || |||||||||||||||| || |||||
Sbjct 180 CAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAG-ATGGTCGTACCTTGGCTGACTACAA 238
Query 408 CATCCAGAAGGAGTCGAC 425
||||||||| ||||||||
Sbjct 239 CATCCAGAAAGAGTCGAC 256
> AT2G35635.1 | Symbols: UBQ7, RUB2 | ubiquitin 7 | chr2:14980970-14982116
FORWARD LENGTH=712
Length=712
Score = 148 bits (80), Expect = 5e-35
Identities = 183/232 (79%), Gaps = 10/232 (4%)
Strand=Plus/Plus
Query 457 ATGCAGATCTTCGTCAAGACTTTGACCGG-AAAGACCATCACCCTTGAAGTGGAGAGCTC 515
||||||||||||||||| || | ||||| ||| || || ||||| ||||| ||||||
Sbjct 75 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAA-ACTATAACCCTAGAAGTTGAGAGCAG 133
Query 516 CGACACCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTAT-CC-CTTTGGAC 573
||||||||| ||||| || || || || ||||||||||| || || || || | | ||
Sbjct 134 CGACACCATCGACAATGTTAAAGCCAAAATCCAGGACAAAGAGGGCATACCAC-CT-GAT 191
Query 574 CAGCAGCGTCTCATCTTCGCTGGAAAGCAGCTT-GAGGATGGTCGCACTTTGGCCGATTA 632
|| ||| | || || || ||||| ||||| || || ||||| || || || || |||||
Sbjct 192 CAACAGAGGCTGATTTTTGCTGGTAAGCA-ATTGGAAGATGGCCGGACCTTAGCTGATTA 250
Query 633 CAACATCCAGAAAGAGTCTACTCTTCA-CTTGGTCCTCCGTCTCCGTGGTGG 683
||||||||||||||||||||||||||| |||| ||||| | ||| | |||||
Sbjct 251 CAACATCCAGAAAGAGTCTACTCTTCATCTTG-TCCTCAGGCTCAGAGGTGG 301
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 33405707755
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5