BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg895796
Length=3942
Score E
Sequences producing significant alignments: (Bits) Value
AT4G02110.1 | Symbols: | transcription coactivators | chr4:935... 4698 0.0
> AT4G02110.1 | Symbols: | transcription coactivators | chr4:935086-940191
FORWARD LENGTH=4095
Length=4095
Score = 4698 bits (2544), Expect = 0.0
Identities = 2977/3180 (94%), Gaps = 54/3180 (2%)
Strand=Plus/Plus
Query 769 AATTATGTGTCCCCCGTTAGGGTTGCAAACAAGACTCCTGAGCAAGGGATAAGCAGAATG 828
||||| ||||||||| |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 964 AATTACGTGTCCCCCATTAGGGTTGCAAACAAGACTCCTGAGCAAGGGATGAGCAAAATG 1023
Query 829 GAGACTGATGGCTCGACGTCTATTAACAGGAGTATCAGAAGGCATTCTTCTCTAGCCACT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1024 GAGACTGATGGCTCGACGTCTATTAACAGGAGTATCAGAAGGCATTCTTCTCTAGCCACT 1083
Query 889 TATTCAAGGAAAACACTTCAGAGATCGCCAGAGACAGATACTTTGGGAAAAGAGTCAAGT 948
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1084 TATTCAAGGAAAACACTTCAGAGATCGCCAGAGACTGATACTTTGGGAAAAGAGTCAAGT 1143
Query 949 GGCCAAAACAGTTCCCTGAGAATGGATGACAAGAGCCTAAAAGCTTCGACTGCCTTTAGT 1008
||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| |
Sbjct 1144 GGCCAAAACCGTTCCTTGAGAATGGATGACAAGGGCCTAAAAGCTTCGTCTGCCTTTAAT 1203
Query 1009 ATCTCTGCATCAAAATCTGGTTCTTTTATGGAAAGAACATCACTCTTT-GAAGATCTTGA 1067
| ||||||||||||||||||||||| ||||||||||| ||||||||| | ||||||||
Sbjct 1204 ACCTCTGCATCAAAATCTGGTTCTTCCATGGAAAGAACGTCACTCTTTCG-AGATCTTGG 1262
Query 1068 CAAGATTGATATGTTGCATGGGGAGGAGTTCCCTCCGATGATGCCACAGCCGAAATTTAC 1127
||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||||||
Sbjct 1263 CAAGATTGATATGTTGCATGGCGAGGAGTTCCCTCCGATGATGCCTCAGGCAAAATTTAC 1322
Query 1128 AGATGGATCTGTCAGTAGGAAAGATTCACAGAAAGTACACCACAACAGTGAGACAAGTAT 1187
||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||
Sbjct 1323 AGATGGATCTGTCAGTAGGAAAGATTCACTGAGAGTACACCACAACAGTGAGGCAAGTAT 1382
Query 1188 TCCACAACCGCCTAGTCTGTTATTGCAGGAATTAAGACCAAGTTCGCCTAACGAAAACCT 1247
||||| |||| ||||| |||||||||||||| |||||||||||||||||||||| |||||
Sbjct 1383 TCCACCACCGTCTAGTTTGTTATTGCAGGAACTAAGACCAAGTTCGCCTAACGACAACCT 1442
Query 1248 TAGGCTTGTGATGAGCATTAGTGATCCAACTGAAAGTGAGGAAGCTGGCCATAAATCACC 1307
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1443 TAGGCCTGTGATGAGCATTAGTGACCCAACTGAAAGTGAGGAAGCTGGCCATAAATCACC 1502
Query 1308 CGCGAGTGAGTTAAACACTAAACTGTTGAGCTCAAATGTGGTACCCGTGGTAGATGCTCT 1367
| ||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||
Sbjct 1503 CACGAGTGAGTTAAACACTAAACTGTTGAGCTCTAATGTGGTACCCATGGTCGATGCTCT 1562
Query 1368 TTCAACTGCAGAGAATATCATTTCAAATTGTGCACGGGATGAAATACCGGAGAGATCGGA 1427
||||||||| ||||||||||||||||||||||| ||||||||||||| | || ||
Sbjct 1563 TTCAACTGCGGAGAATATCATTTCAAATTGTGCGTGGGATGAAATACC---G-GA---GA 1615
Query 1428 GAGATCATGGACTGAGACAATGACAGGAAATGTCTTATTGCAGGAACCAAGATCAGGCTC 1487
| ||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1616 -A-ATCATTGACTGAGAGAATGACAGAAAATGTCTTATTGCAGGAACAAAGATCAGGCTC 1673
Query 1488 ACCTAAGCAAAACCTTAGGGTTGTGCCAAACCTCAGTGACCACACTGAAAGCAGGGAAGC 1547
|||||||||||||||||| |||||| | || | || || |||||||||
Sbjct 1674 ACCTAAGCAAAACCTTAGTGTTGTG------C-CA---A--AC-CT-----CAGGGAAGC 1715
Query 1548 TGCACATAAGTTGGATCTGAGTGATTCAGCAGCTAGGTTGTTCAATTCAGGTGTTGTTCC 1607
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1716 TGCACATGAGTTGGATCTGAGTGATTCAGCAGCTAGGTTGTTCAATTCAGGTGTTGTTCC 1775
Query 1608 CATGGAAGCTGATATTAGGACTCCAGAAAATTCTACTATGAAGGGTGCATTGGATGAAGT 1667
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1776 CATGGAAGCTGATATCAGAACTCCAGAAAATTCTACTATGAAGGGTGCATTGGATGAAGT 1835
Query 1668 ACCTGAAATATCTGTAACTGAGCCTGTGATGAGGAGATCTAGCACCTCTCCTGGGTCGGG 1727
|||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1836 ACCTGAAAGATCTGTAACTGACCCTGTGATGAGGAGATCTAGCACCTCTCCTGGATCGGG 1895
Query 1728 TTTAATTGGAATGAAAGACAAGCAAGAAACAGAGCTGCCCAAGAAGAAAACAGCTCCAAA 1787
|||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 1896 TTTAATCAGAATGAAAGACAAGCAAGAAACAGAGCTGACCACGAAGAAAACAGCTCCAAA 1955
Query 1788 AAAGAGCCTAGGCACCAGAGGCAGGAAAAAGAACCCCATGAACCAAAAGGGATCGATATA 1847
||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct 1956 AAAGAGCCTAGGCACCAGAGGCAGGAAGAAGAACCCCATTAACCAAAAGGGATCAATATA 2015
Query 1848 CTTGAGCGAACCTACCCCAAAGGATGAGCGCAATGATTGTCTAAACAAAGGAAAAGTTTC 1907
||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||||
Sbjct 2016 CTTGAGCGAACCTTCCCCAACGGACGAGCGCAATGTTTGTCTAAACAAAGGAAAAGTTTC 2075
Query 1908 AGCGCCAGTAACAGGTAATAGCAATCAGAAGGAGATATCAAGCCCTGTTCTAAATACTGA 1967
||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct 2076 AGCGCCAGTAACAGGTAATAGCAATCAAAAAGAGATATCAAGCCCTGTCCTAAATACTGA 2135
Query 1968 GGTTGTACCAGAAATGGCAAAACATATTGACTCAGAGACTGAAGCCCATC-AGGGAATTG 2026
|||||||| ||| |||||||||||||||||| ||||||||||||||| || |||||||||
Sbjct 2136 GGTTGTACAAGACATGGCAAAACATATTGACACAGAGACTGAAGCCC-TCCAGGGAATTG 2194
Query 2027 ATTCTGTAGATAATAAATCTTTAGCGCCAGAGGAGAAAGACCATCTTGTGTTGGATCTGA 2086
| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 2195 ACTCTGTAGATAATAAATCTTTAGCCCCAGAAGAGAAAGACCATCTTGTGTTGGATCTGA 2254
Query 2087 TGGTGAACCAAGATAAGCTGCAGGCTAAGACCCCAGAG-CAAGCTGATGCAGAGGTGGAA 2145
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 2255 TGGTGAACCAAGATAAGCTGCAGGCTAAGACCCCAGAGGCA-GCTGATGCAGAGGTGGAA 2313
Query 2146 ATTACGGTGCTAGAACGGGAGTTTAATGATGTTCCAACTGAAGATCCAAGTGAGGGTGTA 2205
||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
Sbjct 2314 ATTACGGTGCTAGAACGGGAGCTTAATGATGTTCCAACTGAAGATCCAAGTGATGGTGCA 2373
Query 2206 TTACAATTAGAGGTTGATAAGAATACAAGTAAACGCAAAAGGGAGGCTGCTGTAGGTAAA 2265
||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2374 TTACAATCCGAGGTTGATAAGAATACAAGTAAACGCAAAAGGGAGGCTGGTGTAGGTAAA 2433
Query 2266 GATAGCCTTCAAAGTGGGAAGAAAGGAAGTTCTTCTACAGGCAAAGTAGGAAAATCCAGT 2325
||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 2434 AATAGCCTTCAAAGAGGGAAGAAAGGAAGTTCTTTTACAGCCAAAGTAGGAAAATCCAGA 2493
Query 2326 GTCAAGAAGACCaaaaaatctaaaaaaGAACATGATACCAAAGCAAACAGTACTCTGACG 2385
|||||||||||||||| ||||| ||||||| |||||| ||||||||| ||||||||| |
Sbjct 2494 GTCAAGAAGACCAAAATATCTAGAAAAGAAAATGATATCAAAGCAAATGGTACTCTGATG 2553
Query 2386 AAAGATATAGGGGATAAATCTGCGGATGGGAAGGAGAACTTAGCATTTGAACAT-AAAAC 2444
|||||| ||||||||| ||||||||||||||||||||||||||||| |||||| ||||
Sbjct 2554 AAAGATGGAGGGGATAACTCTGCGGATGGGAAGGAGAACTTAGCATTGGAACATGAAAA- 2612
Query 2445 TGTGAAGGTCAGTTCTGGTGGAGACCAAAGCCCTGTTGCGGGAGAAACATTAGCAAGAAA 2504
|| ||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||
Sbjct 2613 TGGGAAGGTCAGTTCTGGTGGAGACCAAAGCCTTGTTGCGGGGGAAACATTAACAAGAAA 2672
Query 2505 TGAAGCTGCCACTAAAGATCCAAGCGATGCTGCAGTGCAATTAGAGGTTGATACAAATAA 2564
|||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||
Sbjct 2673 GGAAGCTGCCACTAAAGATCCAAGCTATGCTGCAGCGCAATTAGAGGTTGATACAAAGAA 2732
Query 2565 AGTTAAACGCAGAAAGCAGGCCACTGTAGAAGAAAATTGGCTTCAAACACCTAGTGTCAA 2624
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2733 AGGTAAACGCAGAAAGCAGGCCACTGTAGAAGAAAATAGGCTTCAAACACCTAGTGTCAA 2792
Query 2625 AAAGGCGAAAATTTCTAAAAAAGAAGATGGCGCCAAAGCAAAGAATACTGTTATGAAAGA 2684
|||||||||| ||||||||||||||||||||||||||||||| |||||||| | ||||||
Sbjct 2793 AAAGGCGAAAGTTTCTAAAAAAGAAGATGGCGCCAAAGCAAACAATACTGTGAAGAAAGA 2852
Query 2685 TATATGCATTCACTCTGCAGAAGCGAAAGAGAATGTAGCAGTAGATGAGAAATC-TGGAG 2743
|||||| |||||||||||||||| ||| |||||||||||||||||||| |||| |||||
Sbjct 2853 TATATGGATTCACTCTGCAGAAGTGAAGGAGAATGTAGCAGTAGATGA-AAATTGTGGAG 2911
Query 2744 ATGTCAGTTCTGATGGAGCTCAAAGCCTGGTCGCGGGGAAATCGTTAGCTAAAAAAGAGG 2803
||||||||||||||||||||||||||||||| | || |||||| ||||||||||| ||||
Sbjct 2912 ATGTCAGTTCTGATGGAGCTCAAAGCCTGGTTGTGGAGAAATCTTTAGCTAAAAAGGAGG 2971
Query 2804 CTGCAGCTAAGGATCCAGGTAATGCTGCGATGCAATTAGAGTTTGATAATAATAAATGTA 2863
||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||
Sbjct 2972 CTGCAGCTAAGGATCCAAGTAATGCTGCAATGCAATTAGAGTTTGATGATAATAAATGTA 3031
Query 2864 AACACGGAAATGAGGGAATTGTAGAAAGAAGTAGCCTTCAAAGTGGAAAGAAAGGAAGGA 2923
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3032 AACACGGAAAGGAGGGTATTGTAGAAAGAAGTAGCCTTCAAAGTGGAAAGAAAGGAAGTT 3091
Query 2924 CTTCGACAGTTGAAGTAGGGAAATCCAGTGTCAAGAAGACTaaaaaatctaaaaaaCGAA 2983
|||| | |||||||||||||||||| |||||||||||||||||||||||| ||||| |||
Sbjct 3092 CTTCTAGAGTTGAAGTAGGGAAATCAAGTGTCAAGAAGACTAAAAAATCTGAAAAAGGAA 3151
Query 2984 GTGGCGCCAAAGCAACCGACACTGTGATGAAAGATATAGGGGATAACTCTGCAAAAGAGA 3043
||||| || |||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 3152 GTGGCACCGAAGCAACCGACACTGTGATGAAAGATGTAGGGGATAATTCTGCAAAAGAGA 3211
Query 3044 AGGAGAACATTGCAGTGGATAATAAATCTAGAAAGGTGGGTTCTGGTGGAGACCAAAGCC 3103
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 3212 AGGAGAACATTGCAGTGGATAATGAATCTAGAAAGGTGGGATCTGGTGGAGACCAAAGCC 3271
Query 3104 CGGTTTCAGGAAAACCATTAGCAAAAAAGAAAGTTGCAAAGTCAGCTAAAACAGGTACAA 3163
|||| || | | || ||| ||||||||||||||||||||||||||||||||
Sbjct 3272 CGGT---AG-----C-A--AG-AAA---GAAAGTTGCAAAGTCAGCTAAAACAGGTACAA 3316
Query 3164 AGGCGGATAAAGAGTCTAAGCAGCTCAGGGTTAATCCCTTGGCTAGTAGAAAAGTCTTAC 3223
||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 3317 AGGCGGAGAAAGAGTCTAAGCAGCTCAGGGTTAATCCTTTGGCTAGTAGAAAAGTCTTCC 3376
Query 3224 AGGACCAAGAACATGAGCCGAAGTTTTTTATTGTCAGTGGTCCTAGGTCCCAGAGAAACG 3283
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3377 AGGACCAAGAACATGAGCCGAAATTTTTTATTGTCAGTGGTCCTAGGTCCCAGAGAAACG 3436
Query 3284 AATACCAGCAGATCATTAAGCGTTTAAAAGGAAAATGTTGCCGGGATTCTCATCAGTGGT 3343
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3437 AATACCAGCAGATCATTAGGCGTTTAAAAGGAAAATGTTGCCGGGATTCTCATCAGTGGT 3496
Query 3344 CTTATCAAGCAACACATTTCATTGCTCCTGAAATCCGTAGGACTGAAAAGTTTTTCGCTG 3403
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3497 CTTATCAAGCAACACATTTCATTGCTCCTGAAATCCGTAGGACCGAAAAGTTTTTCGCTG 3556
Query 3404 CTGCTGCATCTGGAAGTTGGATTCTGAAGACTGACTATGTGGCTGATTCAAAGGAAGCTG 3463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3557 CTGCTGCATCTGGAAGTTGGATTCTGAAGACTGACTATGTGGCTGATTCAAAGGAAGCTG 3616
Query 3464 GGAAACTATTACAAGAGGAGCCTTATGAATGGCACAGTACTGGTCTTAGTGCTGATGGTG 3523
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3617 GGAAACTATTACAAGAGGAGCCTTATGAATGGCACAGTTCTGGTCTTAGTGCTGATGGTG 3676
Query 3524 CGATAAACCTCGAGTCCCCAAGGAAATGGCGGCTCTTCAGGGAGCAAACAGGACAGGGTG 3583
||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||||
Sbjct 3677 CGATAAACCTCGAGTCCCCAAAGAAATGGCGGCTCGTCAGGGAGAAAACAGGACACGGTG 3736
Query 3584 CTTTATATGGACTGCGCATTGTTGTATACGGTGACTGCACCATCCCT-GCTTTGGATACA 3642
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 3737 CTTTATATGGACTGCGCATTGTTGTATACGGTGACTGCACCATCCCTTG-TTTGGATACA 3795
Query 3643 CTAAAGCGAGCTGTGAAAGCTGGGGATGGTACGATACTAGCAACGGCGCCTCCATACACG 3702
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 3796 CTAAAGCGAGCTGTGAAAGCTGGGGATGGTACGATACTTGCAACGGCGCCTCCTTACACG 3855
Query 3703 CGTTTCTTGAATCAAAACACGGATTTCGCGTTGATAAGCCCCGGGATGCCGCGGGACGAC 3762
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3856 CGTTTCTTGAATCAAAACACGGATTTCGCGTTGATAAGCCCCGGGATGCCGCGGGATGAC 3915
Query 3763 GTCTGGATCCAAGAGTTTATACGCCACGAAATCCCGTGTGTCCTCTCCGATTACCTGGTG 3822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3916 GTCTGGATCCAAGAGTTTATACGCCACGAAATCCCGTGTGTCCTCTCCGATTACCTGGTG 3975
Query 3823 GAGTACGTTTGTAAACCCGGATATGCACTTGACAAGCACGTGCTCTACAACACGAACTCA 3882
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 3976 GAGTACGTTTGTAAACCCGGATACGCACTTGACAAGCATGTGCTCTACAACACGAACTCA 4035
Query 3883 TGGGCAGAAAGGTCGTTTAACAAGATGCAGCGTAGAGCAGATGTGTGTGTGTACCATTAA 3942
|||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 4036 TGGGCAGAAAAGTCGTTTAACAAGATGCAGCTTAGAGCAGATTTGTGTGTGTACCATTAA 4095
Score = 481 bits (260), Expect = 3e-134
Identities = 352/392 (90%), Gaps = 23/392 (6%)
Strand=Plus/Plus
Query 331 GGAGAAAAGTATGAGCTAGCCAAGCGGATTAAGAGGATTAAACTTGTGAACCACCGCTGG 390
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 574 GGAGAAAAGTATGAGCTAGCCAAGCGGATTAAGAGGATTAAACTTGTGAACCACCGTTGG 633
Query 391 TTAGAGGACTGCTTAAAGAATTGGAAGCTTCTTCCTGAGGTTGATTACGAGATAAGTGGC 450
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 634 TTAGAGGACTGCTTAAAGAATTGGAAGCTCCTACCTGAGGTTGATTACGAGATAAGTGGC 693
Query 451 TATGAGTTGGACATAATGGAGGCTTCAGCTAAGGATTCTGAGGACGAAGCAGAAGATGCT 510
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 694 TATGAGTTGGACATAATGGAGGCTTCAGCTAGGGATTCTGAGGACGAAGCAGAAGATGCC 753
Query 511 TCTGTGAAGCGTGCAAACAACAGCCCTCTTGGTCTTAGGGTCGGTGTCGTCGC-TGCAGT 569
||||| |||| |||||| | ||| ||||||||||||||||| |||| ||| || ||||||
Sbjct 754 TCTGTCAAGCCTGCAAATACCAGTCCTCTTGGTCTTAGGGTTGGTGCCGT-GCCTGCAGT 812
Query 570 TGAAATGTCTAAGCCGGGAGGAAAAGATATCCCTCTTGTTCAAACAAATTCAGGCGCACA 629
|||||| ||||||||||||||||||||| ||||||||| | || | |
Sbjct 813 TGAAATCTCTAAGCCGGGAGGAAAAGATTTCCCTCTTG---A----------GG---A-A 855
Query 630 GGAAGGTTCATCATTATGTAATACGTCCAAAGACAATTGGTTAACTCCTAAAAAGACGGA 689
|| | | ||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 856 GG--G-T-CATCATTATGTAATACGTCCAAAGATAATTGGTTAACTCCTAAAAGGACGGA 911
Query 690 CAGACCTTTTGAAGCCATGGTCTCTACTGATC 721
||||||||||||||| ||||||||||||||||
Sbjct 912 CAGACCTTTTGAAGCAATGGTCTCTACTGATC 943
Score = 477 bits (258), Expect = 3e-133
Identities = 308/332 (93%), Gaps = 4/332 (1%)
Strand=Plus/Plus
Query 3 GTATTCGGGTGTTC-GATTCGCTCTCGTTGGATTCAATCCCATCCATGGAAACTCGTTAC 61
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 138 GTATTCGGGTG-TCAAATTCGCTCTCGTTGGATTCAATCCCATCCATGGAAACTCGTTAC 196
Query 62 GGTCTAAGCTTGTGAGTGGTGGTGGTGTTGAAGTTGGCCAATACTCTCAATCCT-TAACT 120
|||| ||||| |||||||||||||||||||| |||||||||| | |||| || | | |||
Sbjct 197 GGTCGAAGCTAGTGAGTGGTGGTGGTGTTGATGTTGGCCAATTCACTCAGTCATGT-ACT 255
Query 121 CACCTCATCGTAGATAAGCTTGTCTATGATGATCCGATTTGCGTTGCTGCTCGAAACAGC 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 256 CACCTCATCGTAGATAAGCTTCTCTATGATGATCCGATTTGCGTTGCTGCTCGAAACAGC 315
Query 181 GGGAAGGTGGTTGTCACAGGGTCATGGGCTGATCAAAGCTTCGACACTGGAATGCTTGTT 240
|||||||| |||||||| |||||||||| |||||| |||||||||| |||||||||||
Sbjct 316 GGGAAGGTAGTTGTCACCGGGTCATGGGTTGATCACAGCTTCGACATTGGAATGCTTGAC 375
Query 241 AATGCAAATTCGTTATTGTTTAGGCCTCTTAGAGATTTGAATGGGATTCCAGGGTCCAAA 300
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 376 AATGCAAATTCGATATTGTATAGGCCTCTTAGAGATTTGAATGGGATTCCAGGGTCCAAA 435
Query 301 GCCTTAGTTGTGTGCTTGACCGGGTACCAAGG 332
|||||||||||||||||||| || ||||||||
Sbjct 436 GCCTTAGTTGTGTGCTTGACTGGCTACCAAGG 467
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 196403581845
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5