BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg896141 Length=777 Score E Sequences producing significant alignments: (Bits) Value AT2G01960.1 | Symbols: TET14 | tetraspanin14 | chr2:450379-4519... 1064 0.0 > AT2G01960.1 | Symbols: TET14 | tetraspanin14 | chr2:450379-451910 FORWARD LENGTH=905 Length=905 Score = 1064 bits (576), Expect = 0.0 Identities = 714/779 (92%), Gaps = 16/779 (2%) Strand=Plus/Plus Query 10 CAAAGCCAAAAGTCATGGAATCTAGTCGCCGGAATCTTCTTTCCGATCATCACTTTCATT 69 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 24 CAAAGCCATAAGCCATGGAATCTAGTCGCCGGAATCTTCTTTCCGATCATCACTTTC-TT 82 Query 70 -CTCTCAGCTCCTCTCGTCGGCCACGCCTTGTATCTCTTCTGCATGCGTAACGACCACGT 128 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 83 CCTCTCGGCTCCTCTTGTCGGCCACGCCTTGTATCTCTTCTGCATGCGTAACGACCACGT 142 Query 129 TTTCTACCGAAGCAGCTTCCAAAGTATG-T--CACGTGTACAGACACTCGTCAGCGTCTC 185 || |||||| | | ||||||||||| | | |||||||||| ||||||||||||||||| Sbjct 143 TTACTACCG-CG-A-CTTCCAAAGTACGTTACCACGTGTACAAACACTCGTCAGCGTCTC 199 Query 186 TCTCCTCGCCTTGTTCCTCCTTAGCAACATCGCTATGTTTCTCCGACCACGACGGCTTAG 245 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct 200 TCTCCTCGCCTTGTTCCTCCTTAGCAACATCGGTATGTTTCTCCGACCACGACGGCTCAG 259 Query 246 CTACTTTCTAGTTATTGTCTTCTTCGTCGGCTTTGCTTACGCCGGTGTGTACAAGATGGA 305 |||||| |||||||||||||||||| | || ||||||||| ||||||||||||||||||| Sbjct 260 CTACTTCCTAGTTATTGTCTTCTTCATAGGTTTTGCTTACTCCGGTGTGTACAAGATGGA 319 Query 306 AAGCCGGCGGTTTCCTCCGACTCCAATATGGTTCAAGGGAGAATATAGGAATGGACAACG 365 ||||||||||||| ||||||| ||||| || |||||||||||||||| ||||||||| | Sbjct 320 AAGCCGGCGGTTTTCTCCGACACCAATGTGTTTCAAGGGAGAATATAATAATGGACAAGG 379 Query 366 TAG---GT----CAGAAGAATATCAAGTGGTTAAGATTGAACAAAGTCAAGGACGCTTGC 418 || || ||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 380 -AGAACGTAAAACAGAACAATATCAAGTGGTTAAGATAGAACAAAGTCAAGGACGCTTGC 438 Query 419 AAAGAGTTCACTTGCGGTTTGTCGACAGCTATGACTTGCCACCGTATGATAGAAGATTGT 478 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 439 AAAGAGTTCACTTGCGGTTTGTCAACAGCTATGCCTTGCCACCGTATGATAGAAGATTGT 498 Query 479 TACCATCCGTTAAGACTGGATGCTGCAGTCGGCCAGGGAGTTGCAAGCTAGAGACGGTCA 538 ||||||| ||||||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct 499 TACCATCTGTTAAGACTGGATGCTGCAATCGGCCAGGGAATTGCAAACTAGAGACGGTCA 558 Query 539 ACGCATCATTGTGGGTTACAAGAAATCGTCAAAGACCACCGTTAGAAACGGCAATGATCT 598 | ||| ||||||||||||||||||||||| || ||||||| || |||||||||||||||| Sbjct 559 ATGCAACATTGTGGGTTACAAGAAATCGTGAAGGACCACCTTTGGAAACGGCAATGATCT 618 Query 599 ACGGTCGTTACAGTGGCAATGCAGACATAAGGGATTATTACGACATGTGGAGACACGAGT 658 | | ||||||| |||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 619 ATGATCGTTACGGTGGCAATGCAGACATAAAGGATTATTACGATATGTGGAGACACGAGT 678 Query 659 TGAGTGTGTTGTACTATGATTGCATGACTTGTCAGGTCAGGATCATTAAGTCTCCACGGC 718 | |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| Sbjct 679 TAAGTGTGTTGTACTATGATTGTATGACTTGTCAGGTTAGGATCATTAAGTCTCCAAGGC 738 Query 719 TGCGCAAATGGTGGCACTTCGGTGTTTTCTTGTCATCCCTCACTTCTTTGTTTAGATAG 777 |||||||||||||||| |||||||||||||| || |||||||| ||||||||||||||| Sbjct 739 TGCGCAAATGGTGGCAGTTCGGTGTTTTCTTATCTTCCCTCACCTCTTTGTTTAGATAG 797 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37776078544 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5