BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg896438 Length=738 Score E Sequences producing significant alignments: (Bits) Value AT5G10930.1 | Symbols: CIPK5, SnRK3.24 | CBL-interacting protei... 734 0.0 > AT5G10930.1 | Symbols: CIPK5, SnRK3.24 | CBL-interacting protein kinase 5 | chr5:3445366-3447114 REVERSE LENGTH=1749 Length=1749 Score = 734 bits (397), Expect = 0.0 Identities = 479/518 (92%), Gaps = 7/518 (1%) Strand=Plus/Plus Query 178 GCGGATTTTGAATTTCCGCCGTGGTTTTCGCCTGAATCGAGGCGGTTGATTTCTAAACTC 237 ||||||||||||||||||||||||||||| || ||| ||||| |||||||||| |||||| Sbjct 890 GCGGATTTTGAATTTCCGCCGTGGTTTTCTCCGGAAGCGAGGAGGTTGATTTCGAAACTC 949 Query 238 CCCGTCGTAGATCCAGATCGACGGATCTTGATTCCGGCGATTATGAGAACGACTTGGCTT 297 | ||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 950 CTCGTTGTAGATCCAGATCGACGGATCTCGATTCCGGCGATTATGAGAACGCCTTGGCTC 1009 Query 298 CAGAAAAACTTCACTCCGCCGTTAGCTTTCAAAATCGACGAACCGATTTGTTCTC--AG- 354 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1010 CGGAAAAACTTCACTCCGCCGTTAGCTTTCAAAATCGACGAACCGATTTGTTCTCAAAGC 1069 Query 355 AGCAACAACAAC-AACGAAGAAGAAGACGACGTAGATTGGGAAAATCAAACAGAGCCGAT 413 ||||| |||||| || ||||||||||| |||| |||||| |||||||||||||||||||| Sbjct 1070 AGCAAAAACAACGAA-GAAGAAGAAGAAGACGGAGATTGTGAAAATCAAACAGAGCCGAT 1128 Query 414 TTCGCCAAAATTCTTCAACGCTTTCGAATTCATCTCCTCGATGTCTTCCGGATTCGATC- 472 ||||| |||||||||||||||||||||||||| |||||||||||||||||||| || | Sbjct 1129 ATCGCCGAAATTCTTCAACGCTTTCGAATTCATATCCTCGATGTCTTCCGGATTTGA-CT 1187 Query 473 TCTCGAGCTTGTTCGAGAGTAAGAGGAAAGTGAAATCGGTGTTCACGTCAAAATCGTTGG 532 | ||||||||||||||||| |||||||||||| |||||||||| |||||| |||| || Sbjct 1188 TATCGAGCTTGTTCGAGAGCAAGAGGAAAGTGCAATCGGTGTTTACGTCACGGTCGTCGG 1247 Query 533 CGACGGAGGTAATGGAGAGGATCGAAACGGTTACGAAAGAGATGAACATGAAAGTGAAGA 592 |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct 1248 CGACGGAGGTAATGGAGAAGATAGAAACGGTTACGAAGGAGATGAACATGAAAGTGAAGA 1307 Query 593 GAACGAAGGATTTTAAAGTGAAGATGGAAGGGAAAACGGAAGGGAGAAAAGGACGGCTGT 652 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1308 GAACGAAGGATTTTAAAGTGAAGATGGAAGGGAAAACGGAAGGGAGAAAAGGACGGTTGT 1367 Query 653 CGATGACGGCGGAAGTGTTTGAAGTAGCGCCAGAGATA 690 ||||||||||||||||||||||||||||||| |||||| Sbjct 1368 CGATGACGGCGGAAGTGTTTGAAGTAGCGCCGGAGATA 1405 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35816946811 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5