BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg896721
Length=4392
Score E
Sequences producing significant alignments: (Bits) Value
AT3G28030.1 | Symbols: UVH3, UVR1 | 5'-3' exonuclease family pr... 5978 0.0
> AT3G28030.1 | Symbols: UVH3, UVR1 | 5'-3' exonuclease family
protein | chr3:10424253-10431204 FORWARD LENGTH=4534
Length=4534
Score = 5978 bits (3237), Expect = 0.0
Identities = 3746/3978 (94%), Gaps = 89/3978 (2%)
Strand=Plus/Plus
Query 467 AGGAGGAGAAGCTAGATGAAGTATCTCCAGCATCTTTGGTGGGAGGGGAGAATGGTGTTG 526
||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||
Sbjct 568 AGGAGGAGAAGCTAGATGAAGTATCTCAAGCATCTTTGGTGGGA---GAGACTGGTGTTG 624
Query 527 ATGATGTCGTCAAAGAGCT-CACGAAGGATGATCCCAAGGGAAAGGGAGTTTTGTTGGAT 585
||||||| ||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct 625 ATGATGTTGTCAAAGAG-TCCGTGAAGGATGATCCCAAGGGAAAGGGAGTTTTGTTGGAT 683
Query 586 GGGGATGACCTAGATAACAAAATGAAGAGTAATCTTGAACAGGATTCCTCAGTACAGGGG 645
|||||||| | | | ||| |||||||| ||||||||||||||||||||||
Sbjct 684 GGGGATGA-C-------C----T--AGA-TAATCTTGTACAGGATTCCTCAGTACAGGGG 728
Query 646 AAGGATTATCAGGAAAAGTTGGATGAGATGTTGGCGGCATCCCTTGCAGCTGAAGAAGAA 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 729 AAGGATTATCAGGAAAAGTTGGATGAGATGTTGGCGGCATCCCTTGCAGCTGAAGAAGAA 788
Query 706 GGAAACTTTACTAGCAAAGCATCAACTTCAGCTGCAGCAATCCCGTCTGAGGAAGAGGAT 765
|||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||
Sbjct 789 CGAAACTTTACTAGCAAAGCATCGACTTCAGCTGCAGCAATCCCGTC--A-GAGGAGGAT 845
Query 766 GAGGAAGAGGACAGCGACGAAGATGAGGAAATTTTATTGCCAGTAATGGATGGGAATATC 825
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 846 GAGGAAGAAGACAGCGACGGAGATGAGGAAATTTTATTGCCAGTAATGGATGGGAATATC 905
Query 826 GACCCAGCTGTTTTGGCTTCTCTCCCTCCATCCATGCAACTTGATCTCCTTGTTCAGATG 885
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 906 GACCCAGCTGTTCTGGCTTCTCTCCCTCCATCCATGCAACTTGATCTCCTTGCTCAGATG 965
Query 886 AGAGAAAAATTGATGGCAGAAAACCGGCAAAAGTACCAAAAGGTCAAGAAGGCCCCTGAG 945
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 966 AGAGAAAAATTGATGGCAGAAAACCGGCAAAAGTACCAAAAGGTCAAGAAGGCCCCTGAA 1025
Query 946 AAGTTTTCTGAATTGCAAATAGAAGCATATCTTAAAACTGTAGCCTTCCGTCGGGAAATA 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1026 AAGTTTTCTGAATTGCAAATAGAAGCATATCTTAAAACTGTAGCCTTCCGTCGCGAAATA 1085
Query 1006 AATGAAGTTCAGAGATCTGCTGGTGGAAGGGCTGTTGGTGGAGTTCAAACTTCTAGGATA 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086 AATGAAGTTCAGAGATCTGCTGGTGGAAGGGCTGTTGGTGGAGTTCAAACTTCTAGGATA 1145
Query 1066 GCTTCGGAAGCAAACAGAGAATTTATATTCTCGTCTTCTTTTGCTGGTGATAAAGAAGAA 1125
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 1146 GCTTCGGAAGCAAACAGAGAGTTTATATTCTCGTCTTCTTTTGCTGGTGATAAAGAAGTA 1205
Query 1126 CTGGCGTCCGCCAGAGAAGGAAGAAATGATGAAAATCAAAAGAAAACGTCACAACAGTCT 1185
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1206 CTGGCATCTGCCAGAGAAGGAAGAAATGATGAAAATCAAAAGAAAACGTCACAACAGTCT 1265
Query 1186 TTGCCAGTCCCCGTCAAGAATGCTTCCTCGGTGAAAAAATCAGATGCTACCATTGAGTTG 1245
||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1266 TTGCCAGTCTCCGTCAAGAATGCTTCCCCGCTGAAAAAATCAGATGCTACCATTGAGTTG 1325
Query 1246 GATAGAGATGAACCTAAAAATCCTGATGAAAATATTGAAGTATATATAGATGAAAGGGGG 1305
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1326 GATAGAGATGAACCTAAAAATCCTGATGAAAATATTGAAGTATATATAGATGAAAGGGGA 1385
Query 1306 CGTTTTAGAATAAGGAACAGACACATGGGAATCCAAATGACACGTGATATCCAGAGGAAC 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1386 CGTTTTAGAATAAGGAACAGACACATGGGAATCCAAATGACACGTGATATCCAGAGGAAC 1445
Query 1366 TTACATTTGATGAAAGAAAAGGAGAGAACAGCTTCTGGTTCTATGGCTAACAATGATGAA 1425
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1446 TTACATTTGATGAAAGAAAAGGAGAGAACAGCTTCTGGTTCTATGGCTAAGAATGATGAA 1505
Query 1426 ACATTCAGCGCCTGGGAGAACTTTCCTACTGAGGACCAGTTTCTTGAAAAATCACCTGTT 1485
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1506 ACATTCAGCGCCTGGGAGAACTTTCCTACTGAGGACCAATTTCTTGAAAAATCACCTGTT 1565
Query 1486 GAGGAAGATGTTGTGAACCTGGAGATCCAGAATGATGATTCCATGCTGCAAAATCCATCT 1545
||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 1566 GAGAAAGATGTTGTGGACCTGGAGATCCAGAATGATGATTCCATGCTGCATCCTCCATCT 1625
Query 1546 TCAATAGAGATATCATTTGACCATGATGGTGGTGGAAAAGATCTCAATGATGAAGATGAT 1605
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 TCCATAGAGATATCATTTGACCATGATGGTGGTGGAAAAGATCTCAATGATGAAGATGAT 1685
Query 1606 ATGTTTCTTCAATTGGCAGCGGGAGGACCAGTGACAATCAGTTCTACAGAAAATGATCCT 1665
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1686 ATGTTTCTTCAATTGGCAGCGGGAGGACCAGTGACAATTAGTTCTACAGAAAATGATCCT 1745
Query 1666 AAAGAAGACTCTTCACCGTGGGCTTCTGACAGTGATTGGGAAGAAGTGCCTGTTGAACAG 1725
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1746 AAAGAAGACACTTCACCGTGGGCTTCTGACAGTGATTGGGAAGAAGTGCCTGTTGAACAG 1805
Query 1726 AATACTTCTCTCTCTAAGCTTGAAGCGAATTTAAGCAATCAGCATATCCCCAAGGATATT 1785
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1806 AATACTTCTGTCTCTAAGCTTGAAGCGAATTTAAGCAATCAGCATATCCCCAAGGACATT 1865
Query 1786 AGTATCGATGAGGGTGTAGCATGGGAAGAATATAGTTGTGAAAATGCCAATAGCTCCATG 1845
||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct 1866 AGTATCGCTGAGGGTGTAGCATGGGAAGAATATAGTTGTAAAAATGCCAATAACTCCGTG 1925
Query 1846 GAGAATGATACAGTAACAAAGATCACAAAAGGCTATCTGGAAGAAGAAGCTGATCTGCAG 1905
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1926 GAGAATGATACAGTAACAAAGATCACAAAAGGATATCTGGAAGAAGAAGCTGATCTGCAG 1985
Query 1906 GAGGCTATCAAGAAAAGTCTTCTTGAATTACACGATAAGGAATCTGGGGATGTCCTTGAA 1965
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1986 GAGGCTATCAAGAAAAGTCTTCTTGAATTACACGATAAGGAATCCGGGGATGTCCTTGAA 2045
Query 1966 GAAAATCAATCAGTAAGGGTAAATCTTGTTGTTGACAAGCCAAGCGAAGATAGTCTTTGT 2025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2046 GAAAATCAATCAGTAAGGGTAAATCTTGTTGTTGACAAGCCAAGCGAAGATAGTCTTTGT 2105
Query 2026 TCTAGGGAAACCGTTGGTGAAGCTGAGGAAGAGGGATTTCTGGACGAAATAACAATCTTG 2085
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2106 TCTAGGGAAACGGTTGGTGAAGCTGAGGAAGAGAGATTTCTGGACGAAATAACAATCTTG 2165
Query 2086 AAAACCAGTGGTGCTATAAGTGAACAGTCCAACACGTCTGTAGCGGGCAATGCAGATGGT 2145
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 2166 AAAACCAGTGGTGCTATAAGTGAGCAGTCCAACACTTCTGTAGCGGGCAATGCAGATGGT 2225
Query 2146 CAGAAAGGGATAACCAAACAATTTGGTACACACCCTTCTTCCGGTTCTAATAACGTTAGC 2205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2226 CAGAAAGGGATAACCAAACAATTTGGTACACACCCTTCTTCCGGTTCTAATAACGTTAGC 2285
Query 2206 CGTGCTGTGAGCAATGAATTGTCAAAGGTAAAATCAGTTATCTCACCTGAGAAAGCATTA 2265
| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2286 CATGCTGTGAGCAATAAATTGTCAAAGGTAAAATCAGTTATCTCACCCGAGAAAGCATTA 2345
Query 2266 AATGTTGCTAGTCAAAGCTGCATGCTATCCACCATGGCTAAACAGCACAATGAAGAAGGT 2325
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 2346 AATGTTGCTAGTCAAAACCGCATGCTATCCACCATGGCTAAACAGCACAATGAAGAAGGT 2405
Query 2326 TCTGAAAGTTTTGGTGGAGAATCTGTCAAAGTATCTGCTACGCCCATAGCTGATGAGGAA 2385
|||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||
Sbjct 2406 TCTGAAAGTTTTGGTGGAGAATCTGTTAAAGTGTCTGCTATGCCCATAGCTGATGAGGAA 2465
Query 2386 AGAACTGGTTTTCTTGGTGAAAAAGGTAATGCTGATGGTGAATCATCTATCATGAT-G-- 2442
| |||||||||||||| |||||||| |||||||||||||||||||||||||||||| |
Sbjct 2466 ATAACTGGTTTTCTTGATGAAAAAGATAATGCTGATGGTGAATCATCTATCATGATGGAC 2525
Query 2443 TATAAGAGAGATTATAGTAGACGTAAAATCCAGAGTCTTGTCACTGAATCAAGGGACCCT 2502
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2526 GATAAGAGAGATTATAGTAGACGTAAAATCCAGAGTCTTGTCACTGAATCAAGGGACCCT 2585
Query 2503 TCTCTTGATGTCGTCAGATCGCAAATAGGGATACTACATGACACAGATTCACAAAATGAA 2562
|||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2586 TCTCGTAATGTCGTCAGATCGCGAATAGGGATACTACATGACACAGATTCACAAAATGAA 2645
Query 2563 AGAAGGGAGGAAAATAACTCTAACGAGCACACTTTCAATATTGACAGTTCAACAGATTTT 2622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2646 AGAAGGGAGGAAAATAACTCTAACGAGCACACTTTCAATATTGACAGTTCAACAGATTTT 2705
Query 2623 GAAGAGAAAAGCGTGCCTGTTGAATTTTCAGAAGCAAATATTGAGGAGGAAATTCGAGTT 2682
||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 2706 GAAGAGAAAGGCGTGCCTGTTGAATTTTCAGAGGCAAATATAGAGGAGGAAATTCGAGTT 2765
Query 2683 CTCGACCAAGAATTCGTAAGTTTAGGTGATGAACAGAGAAAACTTGAGCGGAATGCTGAA 2742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2766 CTCGACCAAGAATTCGTAAGTTTAGGTGATGAACAGAGAAAACTTGAGCGGAATGCTGAA 2825
Query 2743 TCTGTGAGCAGTGAGATGTTTGCAGAATGCCAGGAGCTACTCCAAATTTTTGGCATACCG 2802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2826 TCTGTGAGCAGTGAGATGTTTGCAGAATGCCAGGAGCTACTCCAAATTTTTGGCATACCG 2885
Query 2803 TACATCATAGCTCCCATGGAAGCAGAGGCACAATGTGCGTTTATGGAACAATCAAACCTT 2862
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 2886 TACATCATAGCTCCCATGGAAGCAGAGGCACAGTGTGCATTTATGGAACAATCAAACCTT 2945
Query 2863 GTTGATGGCATTGTCACTGACGATTCTGATGTATTCTTGTTTGGAGCAAGGAGCGTGTAC 2922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2946 GTTGATGGCATTGTCACTGACGATTCTGATGTATTCTTGTTTGGAGCAAGGAGCGTGTAC 3005
Query 2923 AAAAATATATTTGATGATCGCAAATATGTGGAGACATACTTTATGAAGGACATTGAAAAG 2982
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 3006 AAAAATATATTTGATGATCGTAAATATGTGGAGACATACTTTATGAAGGACATTGAGAAG 3065
Query 2983 GAGCTAGGCTTGAGCAGAGATAAAATAATCCGCATGGCAATGCTTCTAGGAAGCGATTAC 3042
||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3066 GAGTTAGGCTTGAGCAGAGATAAAATAATCCGCATGGCAATGCTTCTAGGAAGTGATTAC 3125
Query 3043 ACAGAAGGAATCAGTGGTATTGGTATTGTCAATGCTATTGAAGTTGTGACTGCATTTCCC 3102
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3126 ACAGAAGGAATCAGTGGTATTGGTATTGTCAATGCTATTGAAGTTGTGACTGCTTTTCCC 3185
Query 3103 GAAGAGGATGGGCTTCAGAAATTTCGTGAGTGGGTTGAATCACCTGATCCAACCATTTTA 3162
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3186 GAGGAGGATGGGCTTCAGAAATTTCGTGAATGGGTTGAATCACCTGATCCAACCATTTTA 3245
Query 3163 GGT-----T--TG-AA-----G----A----TAAAGAAGCGGGGGTCTGGCTCTGTAGAT 3201
|| | || || | | |||||||||| ||||||| ||| ||||||
Sbjct 3246 GGAAAGACTGATGCAAAAACAGGTTCAAAGGTAAAGAAGCGTGGGTCTGCCTCCGTAGAT 3305
Query 3202 AATAAAGGAATCATCTCAGGTGCCTCGACTGATGACACTGAAGAAATAAAGCAAATCTTC 3261
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 3306 AATAAAGGAATCATCTCAGGTGCCTCGACTGATGACACCGAAGAAATCAAGCAAATCTTC 3365
Query 3262 ATGGATCAGCATAGAAAGGTAAGCAAGAACTGGCATATTCCATCGACTTTCCCTAGTGAG 3321
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3366 ATGGATCAGCATAGAAAGGTAAGCAAGAACTGGCATATTCCATTGACTTTCCCTAGTGAG 3425
Query 3322 GCTGTTATTTCAGCCTACTTAAATCCACAAGTGGATCGGTCGACTGAGAAATTCTCATGG 3381
|||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 3426 GCTGTTATATCAGCCTACTTAAATCCGCAAGTGGATCTGTCGACTGAGAAATTCTCATGG 3485
Query 3382 GGCAAGCCTGATCTATCAGTTCTTAGAAAGCTATGCTGGGAAAAGTTTAATTGGAACAGC 3441
||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 3486 GGCAAACCTGATCTTTCAGTACTTAGAAAGCTATGCTGGGAAAAGTTTAATTGGAACGGC 3545
Query 3442 AAGAAAACAGATGATCTACTACTACCAGTCTTGAAGGAGTATGAAAAGCGAGAGACGCAA 3501
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3546 AAGAAAACAGATGAACTACTACTACCAGTCTTGAAGGAGTATGAAAAGCGCGAGACGCAA 3605
Query 3502 CTTCGGATGGAAGCTTTCTATTCCTTTAATGAAAGATTTGCAAAGATCCGTAGTAAAAGA 3561
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3606 CTTCGGATTGAAGCTTTCTATTCCTTTAATGAAAGATTTGCAAAGATCCGTAGTAAAAGA 3665
Query 3562 ATCAACAAAGCTGTCAAAGGAATTGGCGGAGGTCTATCGTCAGAAGTGGCTGAT-AGTAC 3620
|||||||||||||||||||||||||| |||||||| |||||||| ||||| ||| | |||
Sbjct 3666 ATCAACAAAGCTGTCAAAGGAATTGGTGGAGGTCTGTCGTCAGATGTGGCCGATCA-TAC 3724
Query 3621 TCTCCAGGAAGGTCCAAGAAAACGAAATAAGAAAAGAGTTGCTCCTCATGAAACTGAAGA 3680
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3725 TCTCCAGGAAGGTCCAAGAAAACGAAATAAGAAAAAAGTTGCTCCTCATGAAACTGAAGA 3784
Query 3681 TAACACCACTTCTGACAAAGATTCACCTAAAGCCAATGAGAAAGTGAAAAACAAAAGGAA 3740
||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3785 TAACAACACTTCAGACAAAGATTCACCTATAGCCAATGAGAAAGTGAAAAACAAAAGGAA 3844
Query 3741 GCGCTTAGAAAAACCATCTAGTAGTAGAGGCAGAGGCAGAGCCCAGGAAAGAGGA--AG- 3797
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||
Sbjct 3845 GCGCTTAGAAAAACCATCTAGTAGTAGAGGTAGAGGCAGAGCCCAGAAAAGAGGACGAGG 3904
Query 3798 A-G-G-AAGAGTCCAAAAGGATCTCCTTGAGCTATCAGACGACACTTCTGATGATGATGA 3854
| | | |||||||||||| ||||||||||||||||| |||| || |||||||||||||||
Sbjct 3905 AAGAGGAAGAGTCCAAAAAGATCTCCTTGAGCTATCCGACGGCAGTTCTGATGATGATGA 3964
Query 3855 ---C-A--A---GG-A-T----TTAGAGGCAAAACCGAGC-AATCTTCAAAAGTCAACAC 3898
| | | || | | || |||||||||||| || ||||||||||| |||||||
Sbjct 3965 TGACGATGACAAGGTAGTGGAATTGGAGGCAAAACCG-GCCAATCTTCAAAAATCAACAC 4023
Query 3899 GATCTCGGAATCCTGTGAAGTACAATGCAAAAGAAGACGATGAAATGGACGAGTCAAGAA 3958
|||||||||||||||||| ||||| |||||||||||| |||||| |||||||||||||||
Sbjct 4024 GATCTCGGAATCCTGTGATGTACAGTGCAAAAGAAGATGATGAATTGGACGAGTCAAGAA 4083
Query 3959 GCAATGGAGAATC-CCTTAGTGAGCATTTCGAAGAGGTTGATGAAGGCAGAATAGGAAAT 4017
|||||| || ||| || |||||| |||||||||||||||| ||||||||||||||||||
Sbjct 4084 GCAATGAAGGATCTCCG-AGTGAGAATTTCGAAGAGGTTGACGAAGGCAGAATAGGAAAT 4142
Query 4018 GTCTCTGAAGAAAGAACACAGAAAGAAGCATCAATCAATGATTGTCCATCTGAAGACTAT 4077
| | || | | | || ||||||||||| || ||||| || ||||||||
Sbjct 4143 GA-T--GATT------CT--GTA-GATGCATCAATCAACGACTGTCCTTCCGAAGACTAC 4190
Query 4078 ATTCAAACGGGAGGTGGGTTCTGTGCAGATGAAGCTGATGAGATTGGAGATGCTCATCTG 4137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 4191 ATTCAAACGGGAGGTGGGTTCTGTGCAGATGAAGCTGATGAGATTGGAGATGCTCATTTG 4250
Query 4138 AAAGATAAAGCTACGGATGATTACAGAGTGATTGGTGGCGGATTCTGTGTTGATGAGGAT 4197
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 4251 GAAGATAAAGCTACCGATGATTACAGAGTGATCGGTGGCGGATTCTGTGTTGATGAAGAT 4310
Query 4198 GAAACAGCTGAGGAAAACACAACGGATGATG---CAGAGATACTAAAGATGGGGAGTGAA 4254
|||||||||||||||||||||| |||||||| |||| || ||||||||| |||||||
Sbjct 4311 GAAACAGCTGAGGAAAACACAATGGATGATGATGCAGAAATTTTAAAGATGGAGAGTGAA 4370
Query 4255 GAACGACGAAAGAAAGGTAAACGTCGAAATGAAGAAGATGCATCATTGGAAGAGAATGTT 4314
|||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 4371 GAACAACGAAAGAAAGGTAAACGTCGAAACGAAGAAGATGCATCATTGGATGAGAATGTT 4430
Query 4315 GAGATTGATTTTGGGAATTCTTCAACTGGAGGATTAAGTGCTATGCCTTTCTTGAAGAGa 4374
|| ||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 4431 GACATTCATTTTGGGAATTCTTCAGCTGGAGGATTAAGTGCGATGCCTTTCTTGAAGAGA 4490
Query 4375 aaaaagagaaaaaaCTGA 4392
|| |||||||||||||||
Sbjct 4491 AAGAAGAGAAAAAACTGA 4508
Score = 763 bits (413), Expect = 0.0
Identities = 454/474 (96%), Gaps = 2/474 (0%)
Strand=Plus/Plus
Query 1 ATGGGAGTGCAAGGTCTTTGGGAGCTTCTTGCTCCTGTAGGTCGTCGCGTCTCCGTCGAA 60
|||||||| ||||||||||||||||||||||||||||| ||||| || |||||||| |||
Sbjct 69 ATGGGAGTACAAGGTCTTTGGGAGCTTCTTGCTCCTGTTGGTCGCCGTGTCTCCGTAGAA 128
Query 61 ACCCTAGCCAACAAACGATTAGCCATCGATGCGAGTATATGGATGGTACAATTTATCAAA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 129 ACCCTAGCCAACAAACGATTAGCCATCGATGCGAGTATATGGATGGTACAATTTATCAAA 188
Query 121 GCGATGCGTGACGAGAAAGGAGATATGGTTCAGAACGCACACTTGATCGGATTTTTCCGA 180
||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||
Sbjct 189 GCGATGCGTGACGAGAAGGGAGATATGGTTCAGAATGCACACTTGATCGGGTTTTTTCGA 248
Query 181 AGGATTTGTAAGCTTTTGTT-CTTAAGGACTAAACCGATCTTCGTCTTTGATGGAGCTAC 239
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 249 AGGATTTGTAAGCTTTTGTTTCT-AAGGACTAAACCGATCTTCGTCTTTGATGGAGCTAC 307
Query 240 TCCGGCATTGAAACGTCGTACTGTTATTGCTCGTCGTCGTCAACGTGAGAATGCTCAGAC 299
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 308 TCCGGCATTGAAACGTCGTACTGTTATTGCTCGCCGTCGTCAACGTGAGAACGCTCAGAC 367
Query 300 TAAAATCCGAAAAACCGCTGAGAAATTGCTGCTTAATCGGCTTAAGGATATTAGGCTTAA 359
||||||||| || || ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 368 TAAAATCCGGAAGACTGCTGAGAAATTGCTGCTTAATAGGCTTAAGGATATTAGGCTTAA 427
Query 360 GGAACAAGCTAAAGATATTAAGAATCAAAGATTGAAGCAGGATGATAGTGATAGAGTGAA 419
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 428 GGAACAAGCTAAAGATATTAAGAATCAGAGATTGAAGCAGGATGATAGTGATAGAGTGAA 487
Query 420 GAAACGTGTATCTTCTGATTCTGTGGAAGATAATTTGCGAGTTCCTGAGGAGGA 473
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 488 GAAACGTGTGTCTTCTGATTCTGTGGAAGATAATTTGCGAGTTCCTGTGGAGGA 541
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 218978706195
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5