BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg896727
Length=1074
Score E
Sequences producing significant alignments: (Bits) Value
AT3G28100.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1598 0.0
AT3G28070.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1345 0.0
AT3G28080.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1214 0.0
> AT3G28100.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr3:10456099-10460965 FORWARD LENGTH=1266
Length=1266
Score = 1598 bits (865), Expect = 0.0
Identities = 1007/1076 (94%), Gaps = 7/1076 (1%)
Strand=Plus/Plus
Query 1 ATGGCCGGGACAGTAAGTCTCTGGCGGAGAGAGGCCTTGTTCTTGACGGCGATGCTGGCG 60
|||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 53 ATGGCCCGGACAGTAAGTCTCTGGCGGAGAGAGGCCGTGTTCTTGACGGCCATGCTGGCG 112
Query 61 ACTGAAACCGGCCTCGTTGGAATTAGTACTTTGTTTAAAGTAGCAACTTCAAAGGGACTC 120
|| ||||||||| | || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 113 ACAGAAACCGGCGTAGTCGGAATAAGTACTTTGTTTAAAGTAGCAACTTCAAAGGGACTC 172
Query 121 AAtctttatgctttcctcggctattcttatcttcttgcttctctccttcttcttccttct 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 173 AATCTTTACGCTTTCCTCGGCTATTCTTATCTTCTTGCTTCTCTCCTTCTTCTTCCTTCT 232
Query 181 tttttcttctCCAACAGGTCAAGATTACTTCCTCCACTAAGTTTCTCAATACTTTGTAAA 240
| |||||| || |||||||||||| |||||||||||||||||| |||||||||| ||||
Sbjct 233 CTGTTCTTCACCGACAGGTCAAGATCACTTCCTCCACTAAGTTTGTCAATACTTTCTAAA 292
Query 241 ATAGGACTTCTTGGATTATTAGGATCAATGTATGTGATCACAGGATACATAGGCATCAAA 300
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 293 ATAGGACTTCTTGGATTGCTAGGATCAATGTATGTGATCACAGGATACATAGGCATCGAA 352
Query 301 TACAGCAACCCAACCTTAGCCTCTGCCATTAGCAATATCACTCCTGCTCTTACCTTTATC 360
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 353 TACAGCAGCCCAACCTTAGCCTCTGCCATTAGCAATATCACTCCTGCTCTTACCTTCATC 412
Query 361 CTCGCCATTATCTTCAGAATGGAAAAAGTATCTTTCAAAGAAAGGAGCAGTGTGGCCAAA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 413 CTCGCCATTATCTTCAGAATGGAAAAAGTATCTTTCAAAGAAAGGAGCAGTGTAGCCAAA 472
Query 421 GTGATAGGAACAATATTGTCACTAATAGGCGCACTTGTGGTGGTTCTCTACCACGGTCCA 480
||||| || || |||||||| |||||||||||||||| |||||||||||||| ||||||
Sbjct 473 GTGATGGGGACGATATTGTCGTTAATAGGCGCACTTGTTGTGGTTCTCTACCATGGTCCA 532
Query 481 CGTGTCTTCATTGCATCATCTCCGCCGTATCTAAACTTCCGTCAGCTTCCTCCACCGTTA 540
|||||||| ||||||| |||||||||||| ||||||||||||||||| |||| ||||||
Sbjct 533 CGTGTCTTTGTTGCATCTTCTCCGCCGTATATAAACTTCCGTCAGCTTTCTCCGCCGTTA 592
Query 541 TCATCTTCAAATTCAGATTGGCTCATCGGCGGAGCTCTTCTAACCACAAGAGACATCTTC 600
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 593 TCATCTTCAAATTCAGATTGGCTCATCGGCGGAGCTCTTCTTACCATAAGAGACATCTTT 652
Query 601 GTTTCTGTATCTTTCATTCTCCAGGCACAAATAATGAGTGA-ATATCCAGCAGCATTCAC 659
|||||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct 653 GTTTCTGTTTCTTTCATTCTCCAGGCAAAAATAATGAGT-ACATATCCAGCAGCATTCAC 711
Query 660 AGTCTCCTTCCTCTACACCGTATCAGTTTCAATCGTGACTTCAGTGATTGGACTAGTAGT 719
||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||
Sbjct 712 AGTCTCCTTCCTCTACATTGTATCGGTTTCAATCGTGACTTCAATGATTGGACTAGTAGT 771
Query 720 GGAAAAGAACAATCCAAGCGTTTGGATCATTCGATTTGACATTACTTTGATTACAATTGT 779
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 772 GGAAAAGAACAATCCAAGCGTTTGGATCATTCGATTTGATATTACTTTGATAACAATTGT 831
Query 780 TACTATGGCAATAGTTACTTCAGTATACTATGTGATTCATTCATGGACAGTAAGTCACAA 839
|||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 832 AACTATGGCAATAATTACTTCAGTATACTATGTGATCCATTCATGGACAGTACGTCACAA 891
Query 840 AGGACCTCTATACTTAGCGATATTTAAGCCATTGTCGATTTTAATAGCAGTGGTTATGAG 899
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 892 AGGACCTCTATACTTAGCGATATTTAAGCCTTTGTCGATTTTAATAGCGGTGGTTATGAG 951
Query 900 CGCAGTTTTTCTCAACGATTCTCTCTATCTTGGATGTTTGATCGGAGGAATTTTGATAAC 959
|||||||||||||||||||||||||||||| ||||||||||| |||||| | ||||||||
Sbjct 952 CGCAGTTTTTCTCAACGATTCTCTCTATCTCGGATGTTTGATAGGAGGACTATTGATAAC 1011
Query 960 GTTGGGGTTTTACGCTGTGATGTGGGGCAAAGCAAACGAAGAGAAGGATCA---GTTGTT 1016
||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct 1012 GTTGGGGTTTTACGCTGTGATGTGGGGTAAAGCAAACGAAGAGAAAGATCAATTGTTGTT 1071
Query 1017 ACTTTC-GGAAAAAGAGAAAACCCCTCTTCTATTGAACGGCTACAATGACCAAATT 1071
| |||| |||||| |||| |||||||||||||||||||||||| |||| |||||||
Sbjct 1072 AGTTTCAGGAAAA-GAGAGAACCCCTCTTCTATTGAACGGCTAAAATGGCCAAATT 1126
> AT3G28070.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr3:10447922-10451034 FORWARD LENGTH=1314
Length=1314
Score = 1345 bits (728), Expect = 0.0
Identities = 968/1083 (89%), Gaps = 20/1083 (2%)
Strand=Plus/Plus
Query 1 ATGGCCGGGACAGTAAGT-CTCTGGCGGAGAGAGGCCTTGTTCTTGACGGCGATGCTGG- 58
|||||||| || | |||| || ||||||||||||||| ||||||||||||| |||||||
Sbjct 52 ATGGCCGGAACCGCAAGTCCT-TGGCGGAGAGAGGCCGTGTTCTTGACGGCAATGCTGGT 110
Query 59 CGACTGAAACCGGCCTCGTTGGAATTAGTACTTTGTTTAAAGTAGCAACTTCAAAGGGAC 118
| | |||||| || |||| ||||| ||||||||||||||| | ||||||||||||||||
Sbjct 111 GGTC-GAAACCAGCGTCGTCGGAATAAGTACTTTGTTTAAATTTGCAACTTCAAAGGGAC 169
Query 119 TCAAtc-tttatgctttcctcggctattcttatcttcttgcttctctccttcttcttcct 177
|||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 170 TCAA-CATTTATCCTTTCCTCGGCTATTCTTATCTTCTTGCTTCTCTTCTTCTTCTTCCT 228
Query 178 tcttttttcttctCCAACAGGTCAAGATT-ACTTCCTCCACTAAGTTTCTCAATACTTTG 236
||| |||||||| | ||||||||||| || |||||||||||||||| ||||||||||||
Sbjct 229 TCTCTTTTCTTCACTAACAGGTCAAG-TTCACTTCCTCCACTAAGTGTCTCAATACTTTC 287
Query 237 TAAAATAGGACTTCTTGGATTAT-TAGGATCAATGTATGTGATCACAGGATACATAGGCA 295
||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 288 AAAAATTGGACTTCTTGGATT-TCTAGGATCAATGTATGTGATCACAGGATACATAGGCA 346
Query 296 TCAAATACAGCAACCCAACCTTAGCCTCTGCCATTAGCAATATCACTCCTGCTCTTACCT 355
|| ||||||||| ||||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct 347 TCGAATACAGCAGCCCAACCTTAGCCTCCGCCATAAACAATATCACTCCTGCTCTTACCT 406
Query 356 TTATCCTCGCCATTATCTTCAGAATGGAAAAAGTATCTTTCAAAGAAAGGAGCAGTGTGG 415
| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| | |
Sbjct 407 TCATCCTCGCCATTATCTTCAGAATGGAAAAAGTATCTTTCAAAGAGAGGAGTAGTCTAG 466
Query 416 CCAAAGTGATAGGAACAATATTGTCACTAATAGGCGCACTTGTGGTGGTTCTCTACCACG 475
||||| |||| || || ||||||||||| ||||| |||||||||||| || |||||||||
Sbjct 467 CCAAATTGATGGGGACGATATTGTCACTGATAGGTGCACTTGTGGTGATTTTCTACCACG 526
Query 476 GTCCACGTGTCTTCATTGCATCATCTCCGCCGTATCTAAACTTCCGTCAGCTTCCTCCAC 535
|||||||||||||| | ||||| |||||||| ||| |||||||||||||| || ||||||
Sbjct 527 GTCCACGTGTCTTCCTCGCATCTTCTCCGCCCTATGTAAACTTCCGTCAGTTTTCTCCAC 586
Query 536 CGTTATCATCTTCAAATTCAGATTGGCTCATCGGCGGAGCTCTTCTAACCA--CAAGAGA 593
|||| ||||||||||| || |||||||||||||| |||||||||||||||| |||| |
Sbjct 587 CGTTGTCATCTTCAAACTCCGATTGGCTCATCGGTGGAGCTCTTCTAACCATGCAAG-G- 644
Query 594 CATCTTCGTTTCTGTATCTTTCATTCTCCAGGCACAAATAATGAGTGAATATCCAGCAGC 653
||| ||||||||||| ||||||||||| |||||||| |||||||||| ||||||||||||
Sbjct 645 CATATTCGTTTCTGTTTCTTTCATTCTTCAGGCACATATAATGAGTGTATATCCAGCAGC 704
Query 654 ATTCACAGTCTCCTTCCTCTACACCGTATCAGTTTCAATCGTGACTTCAG-TGATTGGAC 712
||||| ||||||||| || ||||| |||| |||||||||||||| || | ||||||||
Sbjct 705 ATTCAGAGTCTCCTTTCTTTACACTGTATGTGTTTCAATCGTGACCTC-GACGATTGGAC 763
Query 713 TAGTAGTGGAAAAGAACAATCCAAGCGTTTGGATCATTCGATTT-GACATTACTTTGATT 771
||||||| ||||||||||| ||||||||||||||||||| |||| || ||||||||||||
Sbjct 764 TAGTAGTTGAAAAGAACAACCCAAGCGTTTGGATCATTC-ATTTCGATATTACTTTGATT 822
Query 772 ACAATTGTTACTATGGCAATAGTTACTTCAGTATACTATGTGATTCATTCATGGACAGTA 831
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 823 ACAATTGTTACCATGGCAATAGTAACTTCAGTATACTATGTGATTCATTCATGGACAGTA 882
Query 832 AGTCACAAAGGACCTCTATACTTAGCGATATTTAAGCCATTGTCGATTTTAATAGCAGTG 891
| || ||||||||||| |||||||| |||||||| || ||||| |||||||||||||||
Sbjct 883 CGACATAAAGGACCTCTGTACTTAGCCATATTTAAACCTTTGTCCATTTTAATAGCAGTG 942
Query 892 GTTATGAGCG-CAGTTTTTCTCAACGATTCTCTCTATCTTGGATGTTTGATCGGAGGAAT 950
|||||| | | || |||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 943 GTTATGGGGGCCA-TTTTTCTCAATGATTCTCTCTATCTCGGATGTTTGATCGGAGGAAT 1001
Query 951 TTTGATAACGTTGGGGTTTTACGCTGTGATGTGGGGCAAAGCAAACGAAGAGAAGGATCA 1010
||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1002 TTTGATAACATTAGGCTTTTACGCTGTGATGTGGGGCAAAGCAAACGAAGAGAAGGATCA 1061
Query 1011 GTTGTTACTTTCGGAAAAAGAGAAAACCCCTCTTCTATTGAACGGCTACAATGACCAAAT 1070
||| | | |||| |||||||||||||| ||||||||||| ||| || | || |||||| |
Sbjct 1062 GTTATCATTTTCAGAAAAAGAGAAAACGCCTCTTCTATTAAACCGCAAAAACGACCAAGT 1121
Query 1071 TTA 1073
|||
Sbjct 1122 TTA 1124
> AT3G28080.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr3:10451518-10455267 FORWARD LENGTH=1322
Length=1322
Score = 1214 bits (657), Expect = 0.0
Identities = 953/1092 (87%), Gaps = 35/1092 (3%)
Strand=Plus/Plus
Query 1 ATGGCCGGGA-CAGTAAGTCTCTGGCGGAGAGAGGCCTTGTTCTTGACGGCGATGCTGGC 59
|||||| ||| ||||||| || ||||||||||||||| ||||||||||||||||||||||
Sbjct 50 ATGGCC-GGAGCAGTAAGCCTTTGGCGGAGAGAGGCCGTGTTCTTGACGGCGATGCTGGC 108
Query 60 -GACTGAAACCGGCCTCGTTGGAATTAGTACTTTGTTTAAAGTAGCAACTTCAAAGGGAC 118
| | |||||| || |||| ||| | |||||| ||||||| |||||||||||||||||||
Sbjct 109 AGGC-GAAACCAGCATCGTCGGACTAAGTACTCTGTTTAAGGTAGCAACTTCAAAGGGAC 167
Query 119 TCAAtc-tttatgctttcctcggctattcttatcttcttgcttctctccttcttcttcct 177
|||| | |||| |||||||| ||||||||||||||||||||||||| || |||||||||
Sbjct 168 TCAA-CATTTACCCTTTCCTCAGCTATTCTTATCTTCTTGCTTCTCTTCTCCTTCTTCCT 226
Query 178 tcttttttcttctCCAACAGGTCAAGATTACTTCCTCCACTAAGTTTCTCAATACTTTGT 237
||| | |||||| ||||||||||||||| |||||||||||||||| ||||||||| | |
Sbjct 227 TCTCTGTTCTTCACCAACAGGTCAAGATCACTTCCTCCACTAAGTGCCTCAATACTCTCT 286
Query 238 AAAATAGGACTTCTTGGATTAT-TAGGATCAATGTATGTGATCACAGGATACATAGGCAT 296
|| || ||||||||||| || | |||||||||||||||| || |||||| |||||||||
Sbjct 287 AAGATTGGACTTCTTGGCTT-TCTAGGATCAATGTATGTTATTACAGGAGGCATAGGCAT 345
Query 297 CAAATACAGCAACCCAACCTTAGCCTCTGCCATTA-GCAATATCACTCCTGCTCTTACCT 355
| ||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||
Sbjct 346 CGAATACAGCAACCCAACCTTAGCCTCCGCCA-TAGGCAATATTGTTCCTGCTCTTACCT 404
Query 356 TTATCCTCGCCATTATCTTCAGAATGGAAAAAGTATCTTTCAAAGAAAGGAGCAGTGTGG 415
| |||||||| |||||||||| ||||| |||||||| |||||||||||||||||||| |
Sbjct 405 TCATCCTCGCTGTTATCTTCAGGATGGAGAAAGTATCATTCAAAGAAAGGAGCAGTGTAG 464
Query 416 CCAAAGTGATAGGAACAATATTGTCACTAATAGGCGCACTTGTGGTGGTTCTCTACCACG 475
|||||||||| || || ||| ||||||||||||||||| |||||||| || |||||||||
Sbjct 465 CCAAAGTGATGGGGACGATACTGTCACTAATAGGCGCATTTGTGGTGATTTTCTACCACG 524
Query 476 GTCCACGTGTCTTCATTGCATCATCTCCGCCGTATCTAAACTTCCGTCAGCTTCCTCCAC 535
||||||||||||| | ||||| ||||| || ||||||||||||||||||||| ||||||
Sbjct 525 GTCCACGTGTCTTTGTCGCATCTTCTCCACCATATCTAAACTTCCGTCAGCTTTCTCCAC 584
Query 536 CGTTATCATCTTCAAATTCAGATTGGCTCATCGGCGGAGCTCTTCTAACC--ACAAGAGA 593
|||| ||||| ||||| || |||||||||||||| |||||| |||| ||| ||||| |
Sbjct 585 CGTTGTCATCGTCAAAGTCTGATTGGCTCATCGGAGGAGCTATTCTTACCATACAAG-G- 642
Query 594 CATCTTCGTTTCTGTATCTTTCATTCTCCAGGCACAAATAATGAGTGAATATCCAGCAGC 653
||||||||||||||| ||||| ||||||||| |||| |||||||| |||||||| | |||
Sbjct 643 CATCTTCGTTTCTGTTTCTTTTATTCTCCAGACACATATAATGAGAGAATATCCTGAAGC 702
Query 654 ATTCACAGTCTCC-TTCCTCTACA-CCGTAT-CAGTTTCAATCGTGACTTCAGTGATTGG 710
||||||||||||| || ||||||| | ||| | ||||||||||||| ||| |||||||
Sbjct 703 ATTCACAGTCTCCATT-CTCTACATTC-TATGTA-TTTCAATCGTGACCTCAATGATTGG 759
Query 711 ACTAGTAGTGGAAAAGAACAATCCAAGCGTTTGGATCATTCGATTT-GACATTACTTTGA 769
||||||||| ||||||||||| |||||| |||||||||||| |||| || ||||| |||
Sbjct 760 ACTAGTAGTCGAAAAGAACAACCCAAGCATTTGGATCATTC-ATTTCGATATTACATTGT 818
Query 770 TTACAATTGTTACTATGGCAATAGTTACTTCAGTATACTATGTGATTCATTCATGGACAG 829
||||||||||||||| || |||| | |||||||||||||||||||||||||||||| ||
Sbjct 819 TTACAATTGTTACTACGGGAATAATAACTTCAGTATACTATGTGATTCATTCATGGGCAA 878
Query 830 TAAGTCACAAAGGACCTCTATACTTAGCGATATTTAAGCCAT-TGTCGATTTTAATAGCA 888
|| |||||||| |||||||||||||||||||||||||||| | |||| ||||| ||||||
Sbjct 879 TACGTCACAAAAGACCTCTATACTTAGCGATATTTAAGCC-TCTGTCTATTTTGATAGCA 937
Query 889 GTGGTTAT-GAG-CGCAGTTTTTCTCAACGATTCTCTCTATCTTGGATGTTTGATCGGAG 946
|||||||| | | | || ||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 938 GTGGTTATGGGGAC-CA-TTTTTCTCAACGATTCTCTCTATCTCGGATGTTTGATTGGAG 995
Query 947 GAATTTTGATAACGTTGGGGTTTTACGCTGTGATGTGGGGCAAAGCAAACGAAGAGAAGG 1006
||||||||||||| || || ||||| | |||||||||||||||||||||||||||||||
Sbjct 996 GAATTTTGATAACATTAGGCTTTTATGTTGTGATGTGGGGCAAAGCAAACGAAGAGAAGA 1055
Query 1007 ATCA-GTTGTTA-C-TTT-C-GGAAAAAGAGAAAACCCCTCTTCTATTGAACGGCTACAA 1061
| || ||||||| | ||| | |||||| |||||||||||||||||||||| |||| | ||
Sbjct 1056 A-CAAGTTGTTATCATTTTCAGGAAAA-GAGAAAACCCCTCTTCTATTGAGCGGCAAAAA 1113
Query 1062 TGACCAAATTTA 1073
|||||||||||
Sbjct 1114 CGACCAAATTTA 1125
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 52610171160
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5