BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg896811 Length=468 Score E Sequences producing significant alignments: (Bits) Value AT4G23400.1 | Symbols: PIP1D, PIP1;5 | plasma membrane intrinsi... 555 2e-157 > AT4G23400.1 | Symbols: PIP1D, PIP1;5 | plasma membrane intrinsic protein 1;5 | chr4:12220743-12222371 FORWARD LENGTH=1129 Length=1129 Score = 555 bits (300), Expect = 2e-157 Identities = 323/334 (97%), Gaps = 2/334 (1%) Strand=Plus/Plus Query 123 ATGTGGTGCTGGTGTGGTTAAAGGGTTTCAACCAGGGCTATACCAGGCGAATGGCGGTGG 182 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 484 ATGTGGTGCTGGTGTGGTTAAAGGGTTTCAACCAGGGCTGTACCAGACGAATGGCGGTGG 543 Query 183 AGCTAATGTGGTGGCTCATGGTTATACAAAGGGTTCAGGTCTTGGTGCAGAGATTATTGG 242 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct 544 AGCTAATGTGGTGGCTCATGGTTACACAAAGGGTTCAGGTCTTGGTGCAGAGATTGTTGG 603 Query 243 AACTTTTGTTCTGGTTTACACTGTTTTCTCAGCTACTGATGCTAAGAGAAGTGCCAGAGA 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 604 AACTTTTGTTCTGGTTTACACTGTTTTCTCAGCTACTGATGCTAAGAGAAGTGCCAGAGA 663 Query 303 CTCTCATGTCCATATCTTGG-TGCCGCTTCCAATTGGGTTTGCTGTCTTCTTGGTACACT 361 ||||||||||| |||||||| | |||||||||||||||||||||||||||||||| |||| Sbjct 664 CTCTCATGTCCCTATCTTGGCT-CCGCTTCCAATTGGGTTTGCTGTCTTCTTGGTGCACT 722 Query 362 TGGCTACCATCCCAATCACTGGAACCAGCATTAACCCGGCCAGGAGTCTCGGAGCTGCCA 421 |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 723 TGGCTACCATCCCAATTACTGGAACTGGCATTAACCCGGCCAGGAGTCTCGGAGCTGCCA 782 Query 422 TCATCTACAACAAGGATCATGCTTGGGATGACCA 455 |||||||||||||||||||||||||||||||||| Sbjct 783 TCATCTACAACAAGGATCATGCTTGGGATGACCA 816 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22253727121 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5