BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg896935

Length=534
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G51820.1 | Symbols: PGM, ATPGMP, PGM1, STF1 | phosphoglucomu...  97.1    1e-19


> AT5G51820.1 | Symbols: PGM, ATPGMP, PGM1, STF1 | phosphoglucomutase 
| chr5:21063368-21068057 REVERSE LENGTH=2159
Length=2159

 Score = 97.1 bits (52),  Expect = 1e-19
 Identities = 54/55 (98%), Gaps = 0/55 (0%)
 Strand=Plus/Plus

Query  35   AGATCATTATCAAAATTGCTGCTGGGAATGGAGTTGGGCAAATTTTAGTTGGAAA  89
            ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  531  AGATCATTATCAAAATTGCTGCTGGGAATGGAGTTGGACAAATTTTAGTTGGAAA  585



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 25569180823


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5