BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg896941

Length=516
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G25280.1 | Symbols: AtTLP10, TLP10 | tubby like protein 10 |...  67.6    1e-10


> AT1G25280.1 | Symbols: AtTLP10, TLP10 | tubby like protein 10 
| chr1:8863777-8866805 FORWARD LENGTH=2112
Length=2112

 Score = 67.6 bits (36),  Expect = 1e-10
 Identities = 36/36 (100%), Gaps = 0/36 (0%)
 Strand=Plus/Plus

Query  16   GTGAGTGGAGTCTCTCATCTTAGTCTGAAGCTCTTT  51
            ||||||||||||||||||||||||||||||||||||
Sbjct  487  GTGAGTGGAGTCTCTCATCTTAGTCTGAAGCTCTTT  522



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 24664966177


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5