BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg897013 Length=324 Score E Sequences producing significant alignments: (Bits) Value AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem ... 89.8 1e-17 > AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem I P subunit | chr2:19243589-19245141 FORWARD LENGTH=936 Length=936 Score = 89.8 bits (48), Expect = 1e-17 Identities = 57/61 (93%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 265 CAGGGAGGC-TTGTTTCAAAAGGTCAAGAACACATACAAAGACATATTAGGGAGCAGCTG 323 ||||||||| |||||| | |||||||||| |||||||||||||||||||||||||||||| Sbjct 605 CAGGGAGGCTTTGTTTGAGAAGGTCAAGAGCACATACAAAGACATATTAGGGAGCAGCTG 664 Query 324 A 324 | Sbjct 665 A 665 Score = 78.7 bits (42), Expect = 3e-14 Identities = 42/42 (100%), Gaps = 0/42 (0%) Strand=Plus/Plus Query 171 AGGATGGTTCACTTACAAGAACCTGGTCTTCAAACCAGACAG 212 |||||||||||||||||||||||||||||||||||||||||| Sbjct 566 AGGATGGTTCACTTACAAGAACCTGGTCTTCAAACCAGACAG 607 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15080324700 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5