BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg897024
Length=2241
Score E
Sequences producing significant alignments: (Bits) Value
AT1G68560.1 | Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase 1 ... 1978 0.0
AT3G45940.1 | Symbols: | Glycosyl hydrolases family 31 protei... 1242 0.0
> AT1G68560.1 | Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase
1 | chr1:25734182-25738002 REVERSE LENGTH=3106
Length=3106
Score = 1978 bits (1071), Expect = 0.0
Identities = 1695/1993 (85%), Gaps = 55/1993 (3%)
Strand=Plus/Plus
Query 1 GATCAGTACCTTGAGATCTCAACTTCACTACCCAAAGACTCGTCTCTGTATGGATTT-GG 59
||||| ||||| ||||||||||||||| |||| ||||| | || || ||||| ||| ||
Sbjct 589 GATCAATACCTAGAGATCTCAACTTCATTACCAAAAGAAGCTTCACTCTATGG-TTTAGG 647
Query 60 TGAAAACTCACAACCCAATGGAATCAAGCTTGTTCCTAATGAGCCTTACACTCTTTTCAC 119
||||||||||||| | ||||| ||||| || || ||||| |||||||| ||||||| |||
Sbjct 648 TGAAAACTCACAAGCTAATGGTATCAAACTCGTACCTAACGAGCCTTATACTCTTTACAC 707
Query 120 TGAAGACGTCTCGGCGT-TTAAACTCAACACCGATCTTTACGGGTCACACCCTG-TTTAC 177
|||||| || || || | | || || ||||| || ||||| || || || || | | ||
Sbjct 708 TGAAGATGTTTCAGC-TATCAATCTTAACACTGACCTTTATGGTTCGCATCC-GATGTAT 765
Query 178 ATGGATTTGAGAAACGTTAGAGGTAAATCCTACGCACACT-CTGTTCTGCTTCTCAACAG 236
|||||| | ||||||||| |||||||| | || || || | ||||||| ||| | || ||
Sbjct 766 ATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA-TGCTGTTCTTCTTTTGAATAG 824
Query 237 TAATGGTATGGATGTGCTT-TACAGAGGCGGTTCCTTGACGTACAAGGTAATTGGAGGTG 295
||||||||||||||| || || ||||| | ||| |||||||| || || || |||||||
Sbjct 825 TAATGGTATGGATGT-TTTCTATAGAGGTGATTCTTTGACGTATAAAGTTATCGGAGGTG 883
Query 296 TTTTCGATTTCTATTTCTTTGCTGGACCGTCGCC-TCTCAATGTCGTTGATCAATACACT 354
||||||||||||||||| | || ||||||||||| | | ||||| |||||||| || ||
Sbjct 884 TTTTCGATTTCTATTTCATCGCCGGACCGTCGCCGT-TAAATGTTGTTGATCAGTATAC- 941
Query 355 TC-GTTAATCGGAAGGCCAGCACCAATGCCGTACTGGTCTCT---ATTTCATCAATGTAG 410
|| |||||||||||| || || || ||||||||||||||| | |||||||||||||||
Sbjct 942 TCAGTTAATCGGAAGACCTGCTCCTATGCCGTACTGGTCTTTAGGATTTCATCAATGTAG 1001
Query 411 ATGGGGATACCGTAATGTATCAGTTCTTGAAGAAGTGGTGGATAATTATC-AAAAGGCTA 469
||||||||||| |||| |||||||| ||||||| |||||||||||||| | |||||||||
Sbjct 1002 ATGGGGATACCATAATCTATCAGTTGTTGAAGATGTGGTGGATAATTA-CAAAAAGGCTA 1060
Query 470 AGATCCCTCTTGATGTGATTTGGAACGATGCTGATTACATGGATGGTTACAAGGACTTCA 529
||||||| |||||||||||||||||||||| |||| ||||||||||| |||| || ||||
Sbjct 1061 AGATCCCACTTGATGTGATTTGGAACGATGATGATCACATGGATGGTCACAAAGATTTCA 1120
Query 530 CATTGGATCTTGTGAACTT-TCCTCATGCTAAGCTATTGGCTTTCTTGGATAGAATCCAC 588
| ||| ||| |||| ||| ||||| ||||||||||||||| |||||||| | |||||||
Sbjct 1121 CGTTGAATCCTGTG-GCTTATCCTCGTGCTAAGCTATTGGCGTTCTTGGACAAAATCCAC 1179
Query 589 AAGATGGGAATGAAGTATGTTGTGATAAATGATCCTGGTATTGGTGTCAACGCGAGCTAC 648
||||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1180 AAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATTGGTGTCAACGCTAGCTAC 1239
Query 649 GGT--GTTTACCAAAGAGGCATGGCTAATGATGTGTTCATTAAATATGAAGGAAAGCCTT 706
||| ||| || |||| ||||||| ||||||||| ||||| |||||||||||||| |
Sbjct 1240 GGTACATTT--CAGAGAGCCATGGCTGCTGATGTGTTTATTAAGTATGAAGGAAAGCCAT 1297
Query 707 TCTTGGCTCAAATGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTCAACCCAAAAACGG 766
||||||||||| |||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct 1298 TCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTTAACCCGAAGACGG 1357
Query 767 TGTCTTGGTGGGGTGATGAAATCCGACGTTTCCATGAATTAGTCCCCATTGATGGTCTT- 825
| ||||||||||||||||||||| ||| |||||||| |||||||| ||||||||| ||
Sbjct 1358 TTTCTTGGTGGGGTGATGAAATCAAACGGTTCCATGATTTAGTCCCTATTGATGGT-TTA 1416
Query 826 TGGATCGACATGAATGAGGTCTCCAA-TTTCTGCTCTGGATTGTGCACAATCCCGGAGGG 884
||||| |||||||| ||||| || || ||| || ||||| || ||||||||||| || ||
Sbjct 1417 TGGATTGACATGAACGAGGTGTCGAACTTT-TGTTCTGGTTTATGCACAATCCCTGAAGG 1475
Query 885 GAAA-CAGTGTCCGAGTGGGGGAGAACCTGGTGTGACGT--GTTGCTTGGACTGCAAGAA 941
||| |||||||| ||||||| || |||||| || || |||||||||||||||||||
Sbjct 1476 -AAAGCAGTGTCCAAGTGGGGAAGGTCCTGGT-TGG-GTTTGTTGCTTGGACTGCAAGAA 1532
Query 942 TATAACCAATACGAGATGGGATGATCCACCTTACAAGATCAATGCTACTGGAAACAAAGC 1001
||||||||| || |||||||||||||| ||||||||||| ||||||||||| | |||
Sbjct 1533 TATAACCAAGACTAGATGGGATGATCCTCCTTACAAGATTAATGCTACTGGTGTCGTAGC 1592
Query 1002 TCCTCTTGGATTCAAGACTATTCCCACAAGTGCTTA-TCACTACAATGGTGTTCGTGAGT 1060
|||| |||| |||||||||||| | ||||||||| | ||| |||||||||||||| ||||
Sbjct 1593 TCCTGTTGGGTTCAAGACTATTGCTACAAGTGCT-ACTCATTACAATGGTGTTCGAGAGT 1651
Query 1061 ACGACGCTCACAGCATCTACGGGTTCTCTGAGGCCATCTCGAC-CAATAAGGCCTTACTT 1119
|||| |||||||| |||||||| ||||||||| ||||| | || || |||| |||||||
Sbjct 1652 ACGATGCTCACAGTATCTACGGATTCTCTGAGACCATCGCAACTCAC-AAGGGCTTACTT 1710
Query 1120 GATGTCCAAGGCAAACGTCCCTTCATATTGTCACGGTCCACTTTTGTTGGTTCAGGTCAA 1179
||||||||||||||||||||||||| || || ||||| ||||| |||||||| ||||||
Sbjct 1711 AATGTCCAAGGCAAACGTCCCTTCATTTTATCCCGGTCTACTTTCGTTGGTTCGGGTCAA 1770
Query 1180 TATGCTGCTCACTGGACTGGAGATAACCAGGGAACATGGCAGAGCTTGCAAGTATCTATC 1239
||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1771 TATGCGGCTCACTGGACCGGAGATAACCAAGGAACATGGCAGAGCTTGCAAGTGTCTATC 1830
Query 1240 TCAACGATGTTGAACTTCGGAATTTTTGGAGTTCCTATGGTTGGTTCAGACATATGTGGA 1299
||||| |||||||||||||| || ||||||||||| ||||||||||||||||| ||||||
Sbjct 1831 TCAACTATGTTGAACTTCGGTATATTTGGAGTTCCCATGGTTGGTTCAGACATTTGTGGA 1890
Query 1300 TTCTTTCCTCCAAC-ACCAGAAGAACTCTGCAACCGTTGGATTGAAGTCGGTGCGTTTTA 1358
|||| || | ||| | ||||||||||||||||||||||||| ||||| || ||||||||
Sbjct 1891 TTCTACCCAC-AACCAACAGAAGAACTCTGCAACCGTTGGATCGAAGTAGGCGCGTTTTA 1949
Query 1359 CCCCTTTTCAAGAGATCATGCCGATTACTA-TGCGCCAAGAAAAGAGCTTTACCAATGGG 1417
||| |||||||||||||| ||| ||||||| | | |||||| ||||||||||||||||||
Sbjct 1950 CCCGTTTTCAAGAGATCACGCCAATTACTACT-CACCAAGACAAGAGCTTTACCAATGGG 2008
Query 1418 GA-ACAGTAGCAGAGTCAGCTCGTAACGCTCTTGGGATGAGATACAA-ACTCCTTCCTTT 1475
| ||||| ||||| |||||||||||||||||||| ||||||||||| | ||||||||||
Sbjct 2009 -ACACAGTTGCAGACTCAGCTCGTAACGCTCTTGGTATGAGATACAAGA-TCCTTCCTTT 2066
Query 1476 TCTCTACACTCTCAACTACGAAGCCCATATGACGGGTGCACCAATTGCTAGACCGCTCTT 1535
||||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||
Sbjct 2067 CCTCTACACTCTTAACTACGAAGCGCATATGACTGGTGCACCCATCGCTAGACCGCTCTT 2126
Query 1536 CTTCTCTTTCCCTGATTACACCGAGTGCTACGGTTTGAGCAAACAGTTCTTGCTCGGAAG 1595
|||||| |||||||| |||||||| || ||||| |||| |||||||||||| |||||
Sbjct 2127 CTTCTCATTCCCTGAATACACCGAATGTTACGGCAACAGCAGACAGTTCTTGCTTGGAAG 2186
Query 1596 CAGCTTAATGATATCACCAGTTCTTGAACAAGGTAAAACCCAAGTTGAAGC-TCTGTTCC 1654
|||||| |||||||| || ||||| || ||||| |||||| |||| ||||| | ||||||
Sbjct 2187 CAGCTTCATGATATCTCCGGTTCTCGAGCAAGGCAAAACCGAAGTAGAAGCAT-TGTTCC 2245
Query 1655 CATCAGGTTCTTGGTACCACATTTTTGACATGACTCAGGTC-GTT-TATTCCAAGAACGG 1712
|| ||||||||||||||||||| || ||||||||||| | | || | | ||||||||||
Sbjct 2246 CACCAGGTTCTTGGTACCACATGTTCGACATGACTCAAG-CAGTAGTGT-CCAAGAACGG 2303
Query 1713 GAAGCGCGTGACTCTCCTAGCTCCGTTGAACGTTGTGAACGTGCATCTTTACCAGAACAC 1772
||| || || ||||||| |||||| |||||| |||||||||| ||||||||||| |||||
Sbjct 2304 GAAACGTGTAACTCTCCCAGCTCCTTTGAACTTTGTGAACGTTCATCTTTACCAAAACAC 2363
Query 1773 GATATTACCGATGCAACAAGGTGGGTTAAATTCCAAAGAGGCGAGAACAACTCCGTTTAG 1832
|| ||||| | ||||||||| ||||| | |||||| || || |||||||| ||||||||
Sbjct 2364 TATCTTACCAACGCAACAAGGCGGGTTGATTTCCAAGGACGCAAGAACAACACCGTTTAG 2423
Query 1833 TCTGGTCGTCACTTTCCCGGCTAG-AGCATCAGAGGGATACGCCACCGGGAAACTCTTTC 1891
|| ||| | ||||||| || || ||| || || || ||||||||||||||||||| ||
Sbjct 2424 CCTCGTCATTGCTTTCCCTGC-AGGAGCTTCTGAAGGTTACGCCACCGGGAAACTCTATC 2482
Query 1892 TTGACGATGATGAGCTTCCAGAGATGAAACTTGGAAACGGACAGTCAACATACGTTGACT 1951
| ||||| || |||||||| || ||||| || ||||| |||||||| || ||||||||||
Sbjct 2483 TAGACGAAGACGAGCTTCCGGAAATGAAGCTAGGAAATGGACAGTCCACGTACGTTGACT 2542
Query 1952 TCTACGCATCGGT 1964
||||||| |||||
Sbjct 2543 TCTACGCTTCGGT 2555
> AT3G45940.1 | Symbols: | Glycosyl hydrolases family 31 protein
| chr3:16886226-16889171 REVERSE LENGTH=2607
Length=2607
Score = 1242 bits (672), Expect = 0.0
Identities = 771/819 (94%), Gaps = 6/819 (1%)
Strand=Plus/Plus
Query 977 AGATCAATGCTACTGGAAACAAAGCTCCTCTTGGATTCAAGACTATTCCCACAAGTGCTT 1036
||||||||||||||||| |||||||| |||| || |||||||||||||||||||||||||
Sbjct 1319 AGATCAATGCTACTGGACACAAAGCTTCTCTAGGGTTCAAGACTATTCCCACAAGTGCTT 1378
Query 1037 ATCACTACAATGGTGTTCGTGAGTACGACGCTCACAGCATCTACGGGTTCTCTGAGGCCA 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 ATCACTACAATGGTGTTCGTGAGTACGACGCTCACAGCATCTACGGGTTCTCTGAGGCCA 1438
Query 1097 TCTCGACCAATAAGGCCTTACTTGATGTCCAAGGCAAACGTCCCTTCATATTGTCACGGT 1156
| ||||| | |||||||| |||| |||||||||||||||||| || |||||||||||||
Sbjct 1439 TAGCGACCCACAAGGCCTTGCTTGCTGTCCAAGGCAAACGTCCATTTATATTGTCACGGT 1498
Query 1157 CCACTTTTGTTGGTTCAGGTCAATATGCTGCTCACTGGACTGGAGATAACCAGGGAACAT 1216
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1499 CCACTTTTGTTGGTTCAGGTCAATATGCTGCTCACTGGACTGGAGATAACCAAGGAACAT 1558
Query 1217 GGCAGAGCTTGCAAGTATCTATCTCAACGATGTTGAACTTCGGAATTTTTGGAGTTCCTA 1276
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1559 GGCAGAGCTTGCAAGTATCTATCTCAACGATGTTGAATTTTGGAATTTTTGGAGTTCCTA 1618
Query 1277 TGGTTGGTTCAGACATATGTGGATTCTTTCCTCCAACACCAGAAGAACTCTGCAACCGTT 1336
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 TGGTTGGTTCAGATATATGTGGATTCTTTCCTCCAACACCAGAAGAACTCTGCAACCGTT 1678
Query 1337 GGATTGAAGTCGGTGCGTTTTACCCCTTTTCAAGAGATCATGCCGATTACTATGCGCCAA 1396
|||||||||| ||||||||||||||||||||||||||||| || |||||||| || ||||
Sbjct 1679 GGATTGAAGTTGGTGCGTTTTACCCCTTTTCAAGAGATCACGCTGATTACTACGCTCCAA 1738
Query 1397 GAAAAGAGCTTTACCAATGGGGAACAGTAGCAGAGTCAGCTCGTAACGCTCTTGGGATGA 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 GAAAAGAGCTTTACCAATGGGGAACAGTAGCAGAGTCAGCTCGTAACGCTCTTGGGATGA 1798
Query 1457 GATACAAACTCCTTCCTTTTCTCTACACTCTCAACTACGAAGCCCATATGACG-GGTGCA 1515
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1799 GATACAAACTCCTTCCTTTTCTCTACACTCTCAACTACGAAGCCCATATGA-GTGGTGCA 1857
Query 1516 CCAATTGCTAGACCGCTCTTCTTCTCTTTCCCTGA-TTACACCGAGTGCTACGGTTTGAG 1574
||||| ||||||||||||||||||||||||||||| || ||| || ||||||||||||||
Sbjct 1858 CCAATCGCTAGACCGCTCTTCTTCTCTTTCCCTGAGTT-CACTGAATGCTACGGTTTGAG 1916
Query 1575 CAAACAGTTCTTGCTCGGAAGCAGCTTAATGATATCACCAGTTCTTGAACAAGGTAAAAC 1634
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1917 CAAACAGTTCTTGCTCGGAAGCAGCTTAATGATATCGCCGGTTCTTGAACAAGGTAAAAC 1976
Query 1635 CCAAGTTGAAGCTCTGTTCCCATCAGGTTCTTGGTACCACATTTTTGACATGACTCAGGT 1694
|||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 1977 CCAAGTTGAAGCACTGTTCCCACCAGGTTCTTGGTACCACATGTTTGACATGACTCAGGT 2036
Query 1695 CGTT-TATTCCAAGAACGGGAAGCGCGTGACTCTCCTAGCTCCGTTGAACGTTGTGAACG 1753
|||| | ||| |||||||||| || | || |||| |||||||| |||||||||||||
Sbjct 2037 CGTTGT-TTCAAAGAACGGGAGGCTTTTCACCCTCCCCGCTCCGTTTAACGTTGTGAACG 2095
Query 1754 TGCATCTTTACCAGAACACGATATTACCGATGCAACAAG 1792
||||||||||||||||| ||||| |||| ||||||||||
Sbjct 2096 TGCATCTTTACCAGAACGCGATACTACCCATGCAACAAG 2134
Score = 1232 bits (667), Expect = 0.0
Identities = 786/844 (93%), Gaps = 5/844 (1%)
Strand=Plus/Plus
Query 4 CAGTACCTTGAGATCTCAACTTCACTACCCAAAGACTCGTCTCTGTATGGATTTGGTGAA 63
|||||||| |||||||||||||| |||| |||||| ||||||| || ||||||||||||
Sbjct 478 CAGTACCTCGAGATCTCAACTTCTTTACCTAAAGACGCGTCTCTATACGGATTTGGTGAA 537
Query 64 AACTCACAACCCAATGGAATCAAGCTTGTTCCTAATGAGCCTTACACTCTTTTCACTGAA 123
||||| ||| ||||||||||||| || |||||||||||||| |||||||| |||||||||
Sbjct 538 AACTCTCAAGCCAATGGAATCAAACTGGTTCCTAATGAGCCATACACTCTCTTCACTGAA 597
Query 124 GACGTCTCGGCGTTTAAACTCAACACCGATCTTTACGGGTCACACCCTGTTTACATGGAT 183
||||||||||||||||| |||||||| |||||||||||||| || || ||||||||||||
Sbjct 598 GACGTCTCGGCGTTTAATCTCAACACTGATCTTTACGGGTCGCATCCGGTTTACATGGAT 657
Query 184 TTGAGAAACGTTAGAGGTAAATCCTACGCACACTCTGTTCTGCTTCTCAACAGTAATGGT 243
|||||||||||||| |||||| |||| |||||||||||||||||||| |||||| |||||
Sbjct 658 TTGAGAAACGTTAGTGGTAAAGCCTATGCACACTCTGTTCTGCTTCTTAACAGTCATGGT 717
Query 244 ATGGATGTGCTTTACAGAGGCGGTTCCTTGACGTACAAGGTAATTGGAGGTGTTTTCGAT 303
||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 718 ATGGATGTGTTTTACAGAGGCGATTCCTTGACGTACAAGGTAATTGGAGGTGTTTTTGAT 777
Query 304 TTCTATTTCTTTGCTGGACCGTCGCCTCTCAATGTCGTTGATCAATACACTTCGTTAATC 363
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 778 TTCTATTTCTTCGCTGGACCGTCGCCTCTTAATGTCGTTGATCAATACACTTCGTTAATA 837
Query 364 GGAAGGCCAGCACCAATGCCGTACTGGTCTCTA---TTTCATCAATGTAGATGGGGATAC 420
||| ||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct 838 GGACGGCCAGCGCCAATGCCGTACTGGTCTCTAGGGTTTCACCAATGTAGATGGGGGTAC 897
Query 421 CGTAATGTATCAGTTCTTGAAGAAGTGGTGGATAATTATCAAAAGGCTAAGATCCCTCTT 480
||||||||||||||| || |||| |||||||||||||| |||||||||||||||||||||
Sbjct 898 CGTAATGTATCAGTTGTTAAAGATGTGGTGGATAATTACCAAAAGGCTAAGATCCCTCTT 957
Query 481 GATGTGATTTGGAACGATGCTGATTACATGGATGGTTACAAGGACTTCACATTGGATCTT 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 958 GATGTGATTTGGAACGATGCTGATTACATGGATGGTTACAAGGACTTCACTTTGGATCTT 1017
Query 541 GTGAACTTTCCTCATGCTAAGCTATTG-GCTTTCTTGGATAGAATCCACAAGATGGGAAT 599
||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||
Sbjct 1018 GTGAATTTTCCTCATGCTAAGCTATTGAG-TTTCTTGGATAGAATCCATAAGATGGGAAT 1076
Query 600 GAAGTATGTTGTGATAAATGATCCTGGTATTGGTGTCAACGCGAGCTACGGTGTTTACCA 659
|||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct 1077 GAAGTATGTTGTGATAAAAGATCCTGGTATTGGTGTCAACGCGAGTTACGGTGTATACCA 1136
Query 660 AAGAGGCATGGCTAATGATGTGTTCATTAAATATGAAGGAAAGCCTTTCTTGGCTCAAAT 719
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1137 AAGAGGCATGGCTAGTGATGTGTTCATTAAATATGAAGGAAAGCCTTTCTTGGCTCAAGT 1196
Query 720 GTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTCAACCCAAAAACGGTGTCTTGGTGGGG 779
|||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct 1197 GTGGCCTGGTCCAGTTTACTTCCCTGATTTCCTTAACCCGAAAACGGTTTCTTGGTGGGG 1256
Query 780 TGATGAAATCCGACGTTTCCATGAATTAGTCCCCATTGATGGTCTTTGGATCGACATGAA 839
|||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1257 CGATGAAATTCGACGTTTCCATGAGTTAGTACCCATTGATGGTCTTTGGATCGACATGAA 1316
Query 840 TGAG 843
||||
Sbjct 1317 TGAG 1320
Score = 396 bits (214), Expect = 6e-109
Identities = 251/269 (93%), Gaps = 1/269 (0%)
Strand=Plus/Plus
Query 1962 GGTAAGTTTTGCGTTGAGACAAGGTTTGGTGATTGAGAGAGTGATTGTTTTGGGACTTGA 2021
||| || ||||||||||| ||||||||||||||||||| ||||||||||||||||||| |
Sbjct 2302 GGTCAG-TTTGCGTTGAGCCAAGGTTTGGTGATTGAGAAAGTGATTGTTTTGGGACTTAA 2360
Query 2022 AGGAACAGGGCAAGTTTCTGAAATACATCTTAATGGAAGTCCAATCTCCAACGAGACCAA 2081
||||||| || ||||||||||||||| ||||||||||||| |||||||||| ||||||||
Sbjct 2361 AGGAACATGGAAAGTTTCTGAAATACTTCTTAATGGAAGTTCAATCTCCAATGAGACCAA 2420
Query 2082 GAGGATTGAGGTAAGCTCCAAGGAGCAGAAGTATGTGGTGGTTTCGGAAGATAAAGGAGA 2141
|| |||||||||||||||||||||||||| ||||||||||| ||| |||||| |||||||
Sbjct 2421 GACGATTGAGGTAAGCTCCAAGGAGCAGATGTATGTGGTGGGTTCTGAAGATGAAGGAGA 2480
Query 2142 GAGTAAGAGCTTCATGGTTGAGCTTAAGGGCCTTGAGATACTAGTGGATAAGGACTTCAA 2201
|||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 2481 GAGTAAAAGCTTCATGGTTGAGCTTAAGGGCCTTGAGATGCTAGTGGGTAAGGACTTCAA 2540
Query 2202 CATATCTTGGAAAATGGCTAGTACTAATG 2230
|||||||||||||||||||||||||||||
Sbjct 2541 CATATCTTGGAAAATGGCTAGTACTAATG 2569
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 111194207175
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5