BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg897254
Length=1629
Score E
Sequences producing significant alignments: (Bits) Value
AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domai... 1205 0.0
AT3G44790.1 | Symbols: | TRAF-like family protein | chr3:16328... 787 0.0
AT3G44805.1 | Symbols: | TRAF-like superfamily protein | chr3:... 383 3e-105
AT3G58430.1 | Symbols: | TRAF-like family protein | chr3:21613... 182 1e-44
AT3G58370.1 | Symbols: | TRAF-like family protein | chr3:21595... 119 1e-25
AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:21564... 71.3 3e-11
AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:19769... 71.3 3e-11
AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:21597... 67.6 4e-10
AT1G31380.1 | Symbols: | TRAF-like family protein | chr1:11240... 65.8 1e-09
AT1G31370.1 | Symbols: | Ubiquitin-specific protease family C1... 65.8 1e-09
AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:11243... 60.2 6e-08
AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:11245... 60.2 6e-08
> AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domain-containing
protein | chr3:16343333-16346027 FORWARD LENGTH=1695
Length=1695
Score = 1205 bits (652), Expect = 0.0
Identities = 1093/1296 (84%), Gaps = 69/1296 (5%)
Strand=Plus/Plus
Query 1 ATGGGGAATGAGAAATTCACTTGGGTGATTAAGAATTTCTGTTCTTTGCAATCTGAGTCC 60
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 1 ATGGGGTATGAGAAATTCACTTGGGTGATTAAGAATTTCTCATCTTTGCAATCTGAGTAC 60
Query 61 ATTAATTCTGATGTATTCGTGATCGGTGGCTGCAAATGGTATCTTGCGGCTTATCCCAAA 120
||||| |||||| ||||||||||||||||||||||||||| |||| ||| ||||||||
Sbjct 61 ATTAAATCTGATATATTCGTGATCGGTGGCTGCAAATGGTGTCTTTTGGCCTATCCCAAT 120
Query 121 GGAAAATATAAGGCTGA-TTATTTGTTTCTATTTCTGG-TGGTAGCTGA-TTTTAAAACT 177
|||||| | || ||| | |||||||| ||| | ||||| |||| || | ||| ||||||
Sbjct 121 GGAAAACAGAATGCT-AGTTATTTGTCTCTGTATCTGGATGGT-CCT-ACTTTAAAAACT 177
Query 178 TTGCCATATGGATGGAAAAGACACATAAGATATCGCCTAACT-TTCGTAAATCAAATCTC 236
||||| | |||||| | ||| | |||||||| |||||||||| || ||||||||| ||||
Sbjct 178 TTGCCTTGTGGATGTAGAAGGCGCATAAGATTTCGCCTAACTGTT-GTAAATCAACTCTC 236
Query 237 CTATGGA-CTCTCCCTACTAGGAGGAAAAGAAGA--ATGGATAGGTAAATACCGTCCTCT 293
| | | ||||||| || |||| | || ||| | |||| | | |||| | | ||||||
Sbjct 237 CGA-AAACCTCTCCCGACGAGGA-G-AAGGAAAACGATGGTTTGATAAAAAGCTTCCTCT 293
Query 294 CTGCGGGTATCAAAAAATGATTCTTCTTACCAAACTTAATGACAAAAAGGGTGGATTTCT 353
|| |||||| || || || ||||||||||||||||||||| |||| | |||||||||||
Sbjct 294 GTGTGGGTATGAAGAAGTGCTTCTTCTTACCAAACTTAATGCCAAACATGGTGGATTTCT 353
Query 354 TGTGAACAATGAAGTCAAGATTGTTGTGGAGGTAGATGTTCTTCAAGTGATTGGCAAATT 413
|||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||
Sbjct 354 TGTGAACAATGAAGTCAAGATTGTTGCGGAGGTAGATGTTCTTGAAGTTATTGGCAAATT 413
Query 414 AGATGTTTCTGAGGAATCTCAAGAGGTAACTCAACCTCTGAAAAGGATAAAGCTAAATGG 473
|||||||||| |||||||||||||||||| | |||||| ||||||||| | |||| ||||
Sbjct 414 AGATGTTTCTAAGGAATCTCAAGAGGTAATTAAACCTCGGAAAAGGATGAGGCTATATGG 473
Query 474 TGA---TGGT---GTG----G-----T---------AACTTCATCAGTAGATGTCAATGG 509
||| |||| ||| | | ||||||||||||||||||||||||
Sbjct 474 TGATGGTGGTGCGGTGTCTAGTCATTTGCACAAGGAAACTTCATCAGTAGATGTCAATGG 533
Query 510 CTTTCAAGTTCTTCCTTCAGAGGCGGAATCTGTGAAACGCATATTCGAAAAACACCCAGA 569
|||||||||||||||||| |||||||||||||||| || |||||||||| ||||||| |
Sbjct 534 GTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGCGTATATTCGAAAGACACCCATA 593
Query 570 AATGGCACTAAAGTTCCGGGCAAAGAACCAACA-TCTGAGGACATCATGCATAAATGTCG 628
|||||| || ||||||| |||||||||||||| | ||||| ||||||| |||||||||
Sbjct 594 CATGGCATTAGAGTTCCGAGCAAAGAACCAACAGT-TGAGGGCATCATGTATAAATGTCC 652
Query 629 TCCTCAACCTAATCAAAACGTTGTGTCAATCACTGCAAGACATTTCCATTGATGACATGG 688
|||||| ||||||||| |||||||| || ||||||||||| ||||||||||||||| | |
Sbjct 653 TCCTCAGCCTAATCAAGACGTTGTGCCAGTCACTGCAAGATATTTCCATTGATGACCTAG 712
Query 689 GACAAGCAGAGCAAGCACTAACATAT-CTG-AATAATTCGGGCTTTAAGGTGGATTGGTT 746
| ||| ||||||||| |||||||| | ||| || ||||| || ||||||||||||||| |
Sbjct 713 GCCAAACAGAGCAAGTACTAACAT-TCCTGCAA-AATTCTGGATTTAAGGTGGATTGGCT 770
Query 747 GGAGGGTAAACTGGAGGAAGTAAAGGAAAAGAAGATGGAAGAGCTGTTTGGTAAGACTCG 806
|||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||
Sbjct 771 GGAGCGTAAACTGGAGGAAGTAAAGGAAAAGAAGATCCAAGAGCACATTGGTAAGTCTCG 830
Query 807 GATGCAAGAATTAGAGGAAGAACTCAAGGTCTTTAA-AAGAAAGTGCTCTGACATAGAAG 865
|||||||| |||||||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct 831 GATGCAAGGATTAGAGGAAGACCTGAAGGTCTTCAAGAAGAA-GTGCTCTGACATAGAAG 889
Query 866 CTATACTGGAGAAAGAGAAAGAAGAACTCAAGG-ACTTGAAGCAAAAATGCTCGGACACA 924
|| |||||||||||||||| ||||||||||||| | ||||||||||| ||||| |||| |
Sbjct 890 CTCTACTGGAGAAAGAGAAGGAAGAACTCAAGGGA-TTGAAGCAAAAGTGCTCAGACATA 948
Query 925 GAAGCTCTACTTGAGAAAGAGAAGACAAAGGTGTTGGCCGCCGCCAGACA-AACACAGTG 983
|||||||| || |||||||||||| |||||||||||| || || | || ||| | |
Sbjct 949 GAAGCTCTGCTGGAGAAAGAGAAGGGAAAGGTGTTGGCTGCTGCT-GCCAGAACTCC-T- 1005
Query 984 CTG--GTTAGATCGCAAAAATTTTCTCCAC-GGATATCAAGAAATGATTTCCCTTACCAA 1040
|| ||||||||||| ||| ||||| | || |||| |||||||||||||||||||||
Sbjct 1006 CTAACGTTAGATCGCATGAATATTCTC-ATTGGGTATCGAGAAATGATTTCCCTTACCAA 1064
Query 1041 ACTTAATGCCAAAGAA-GGTGGATTTCTTGTGAACAATGAAGTCAAGATTGTTGCGGAGG 1099
|||||||||||| ||| ||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 1065 ACTTAATGCCAA-GAAAGGTGGATTTCTTGTGAACAATAAAGTCAAGATTGTTGTGGAGG 1123
Query 1100 TTTATGTTCTTCAAGTTATTGGCA-ATTTAGATGTTTTAGAGGGATCTCAAGACGTAACT 1158
| | |||||||||||| ||||| ||| |||||||| ||||||| || |||
Sbjct 1124 TAGACGTTCTTCAAGTTGTTGGCGGATT-AGATGTTT---------CTCAAGAGGTGACT 1173
Query 1159 AAACCTCTGAAAAGGATAAGGCTAAATGATGATGGTGCAGCGTCTAGTCATTTGCAAACC 1218
||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||
Sbjct 1174 CAACCTCTGAAAAGGATAAGGCTAAACGATGATGGTGCAGCATCTACTCATTTGCAAACC 1233
Query 1219 ATGGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
|| |||||||||||||||| ||||||| ||||||||
Sbjct 1234 ATTGATGTCAATGGGTTTCTAGTTCTTGCTTCACAG 1269
Score = 496 bits (268), Expect = 4e-139
Identities = 462/552 (84%), Gaps = 28/552 (5%)
Strand=Plus/Plus
Query 298 GGGTATCAAAAAATGA-TTCTTCTTACCAAACTTAATGACAA-AAAGGGTGGATTTCTTG 355
||||||| | |||||| ||| |||||||||||||||| ||| ||| |||||||||||||
Sbjct 1036 GGGTATCGAGAAATGATTTC-CCTTACCAAACTTAATGCCAAGAAA-GGTGGATTTCTTG 1093
Query 356 TGAACAATGAAGTCAAGATTGTTGTGGAGGTAGATGTTCTTCAAG-TGATTGGCAAATTA 414
|||||||| ||||||||||||||||||||||||| |||||||||| || ||||| ||||
Sbjct 1094 TGAACAATAAAGTCAAGATTGTTGTGGAGGTAGACGTTCTTCAAGTTG-TTGGCGGATTA 1152
Query 415 GATGTTTCTGAGGAATCTCAAGAGGTAACTCAACCTCTGAAAAGGATAAAGCTAAATGGT 474
|||| | | ||||||||||| |||||||||||||||||||||| |||||| | |
Sbjct 1153 GATG--T-T------TCTCAAGAGGTGACTCAACCTCTGAAAAGGATAAGGCTAAACGAT 1203
Query 475 GATGGTGTGGTAACT--TCA--T-C--A--GTAGATGTCAATGGCTTTCAAGTTCTTCCT 525
||||||| | | || ||| | | | | ||||||||||| |||| ||||||| ||
Sbjct 1204 GATGGTGCAGCATCTACTCATTTGCAAACCATTGATGTCAATGGGTTTCTAGTTCTTGCT 1263
Query 526 TCAGAGGCGGAATCTGTGAAACGCATATTCGAAAAACACCCAGAAATGGCACTAAAGTTC 585
||| ||| ||||||||| ||||| |||||||||| ||||| |||||| || ||| ||||
Sbjct 1264 TCACAGGTGGAATCTGTTAAACGTATATTCGAAAGCCACCCTGAAATGACATTAACGTTC 1323
Query 586 CGGGCAAAGAACCAAC-ATCTGAGGACATCATGCATAAATGTCGTCCTCAACCTAATCAA 644
|| ||||| ||||||| || ||||||| ||||||||||||||| ||||||||||||| |
Sbjct 1324 CGAGCAAATAACCAACAAT-TGAGGACTTCATGCATAAATGTCCTCCTCAACCTAATTGA 1382
Query 645 AACGTTGTGTCA-ATCACTGCAAGACATTTCCATTGATGACATGGGACAAGCAGAGCAAG 703
|| |||| || |||| |||| || |||| |||| |||| |||| ||| |||||||||
Sbjct 1383 GACAATGTG-CATGTCACCGCAAAACCTTTCTATTGCTGACCTGGGCCAAACAGAGCAAG 1441
Query 704 CACTAACATATCTGAATAATTCGGGCTTTAAGGTGGATTGGTTGGAGGGTAAACTGGAGG 763
|||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1442 CACTAACATACCTGAAAAATTCGGGCTTTAAGGTGGATTGGTTGGAGCGTAAACTGGAGG 1501
Query 764 AAGTAAAGGAAAAGAAGATGGAAGAGCTGTTTGGTAAGACTCGGATGCAAGAATTAGAGG 823
|||||| |||||||||||| |||||| |||||||| |||||||||||| ||||||||
Sbjct 1502 AAGTAACGGAAAAGAAGATCCAAGAGCACATTGGTAAGTCTCGGATGCAAGGATTAGAGG 1561
Query 824 AAGAACTCAAGG 835
|||| || ||||
Sbjct 1562 AAGACCTGAAGG 1573
Score = 420 bits (227), Expect = 2e-116
Identities = 314/355 (88%), Gaps = 9/355 (3%)
Strand=Plus/Plus
Query 1255 CTCAACCTAATCGAGACGATGTGTGTGTCACTGCAAGACCTTTCCATAT-ATGACTTGGG 1313
|||| ||||||| ||||| |||| |||||||||||| ||||||| | ||||| | ||
Sbjct 655 CTCAGCCTAATCAAGACGTTGTGCCAGTCACTGCAAGATATTTCCAT-TGATGACCTAGG 713
Query 1314 CCAAGCAGAGCAAGCACTAACATACCTG-AATAATTCGGGATTTAAGGTGGATTGGTTGG 1372
|||| ||||||||| |||||||| |||| || ||||| |||||||||||||||||| |||
Sbjct 714 CCAAACAGAGCAAGTACTAACATTCCTGCAA-AATTCTGGATTTAAGGTGGATTGGCTGG 772
Query 1373 AGCGTAAACTGGAGGAAGTAAAGGAAAAGAAGATGGAAGAGCACATTGGTAAGTCTCGGA 1432
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 773 AGCGTAAACTGGAGGAAGTAAAGGAAAAGAAGATCCAAGAGCACATTGGTAAGTCTCGGA 832
Query 1433 TGCAAGAATTAGAGAAAGACCTGAAGCTCTTCAAGCAGAAGTGCTCTGACATAGAAGATC 1492
|||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||
Sbjct 833 TGCAAGGATTAGAGGAAGACCTGAAGGTCTTCAAGAAGAAGTGCTCTGACATAGAAGCTC 892
Query 1493 TACTGGAGAAAGAGAAGGAAGAACTCAAGA-ACTTGAAGAAAAAGTGCTCGGACACAGAA 1551
||||||||||||||||||||||||||||| | |||||| |||||||||| |||| ||||
Sbjct 893 TACTGGAGAAAGAGAAGGAAGAACTCAAGGGA-TTGAAGCAAAAGTGCTCAGACATAGAA 951
Query 1552 GCTCTACTTGAGAAAGAGAAGAAAAAGGTGTTGGCCGC--C-GCCAGAGCTCCTC 1603
||||| || |||||||||||| |||||||||||| || | |||||| ||||||
Sbjct 952 GCTCTGCTGGAGAAAGAGAAGGGAAAGGTGTTGGCTGCTGCTGCCAGAACTCCTC 1006
Score = 272 bits (147), Expect = 7e-72
Identities = 186/205 (91%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 1255 CTCAACCTAATCGAGACGATGTGTGTGTCACTGCAAGACCTTTCCATAT-ATGACTTGGG 1313
||||||||||| ||||| ||||| |||||| |||| ||||||| || | |||| ||||
Sbjct 1369 CTCAACCTAATTGAGACAATGTGCATGTCACCGCAAAACCTTTCTAT-TGCTGACCTGGG 1427
Query 1314 CCAAGCAGAGCAAGCACTAACATACCTGAATAATTCGGGATTTAAGGTGGATTGGTTGGA 1373
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1428 CCAAACAGAGCAAGCACTAACATACCTGAAAAATTCGGGCTTTAAGGTGGATTGGTTGGA 1487
Query 1374 GCGTAAACTGGAGGAAGTAAAGGAAAAGAAGATGGAAGAGCACATTGGTAAGTCTCGGAT 1433
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct 1488 GCGTAAACTGGAGGAAGTAACGGAAAAGAAGATCCAAGAGCACATTGGTAAGTCTCGGAT 1547
Query 1434 GCAAGAATTAGAGAAAGACCTGAAG 1458
||||| ||||||| |||||||||||
Sbjct 1548 GCAAGGATTAGAGGAAGACCTGAAG 1572
Score = 246 bits (133), Expect = 4e-64
Identities = 206/238 (87%), Gaps = 17/238 (7%)
Strand=Plus/Plus
Query 1033 CTTACCAAACTTAATGCCAAAGAAGGTGGATTTCTTGTGAACAATGAAGTCAAGATTGTT 1092
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 319 CTTACCAAACTTAATGCCAAACATGGTGGATTTCTTGTGAACAATGAAGTCAAGATTGTT 378
Query 1093 GCGGAGGTTTATGTTCTTCAAGTTATTGGCAATTTAGATGTTT-TAGAGGGATCTCAAGA 1151
|||||||| |||||||| ||||||||||||| |||||||||| || ||| |||||||||
Sbjct 379 GCGGAGGTAGATGTTCTTGAAGTTATTGGCAAATTAGATGTTTCTA-AGGAATCTCAAGA 437
Query 1152 CGTAACTAAACCTCTGAAAAGGATAAGGCTAAATGATGATGGTGCAGCG-T--CTAGTCA 1208
|||| |||||||| ||||||||| |||||| ||| |||||||| ||| | |||||||
Sbjct 438 GGTAATTAAACCTCGGAAAAGGATGAGGCTATATGGTGATGGTGGTGCGGTGTCTAGTCA 497
Query 1209 TTTGCA-AA-----C--CAT--G--GATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
|||||| || | ||| | |||||||||||||||||||||||||||||||||
Sbjct 498 TTTGCACAAGGAAACTTCATCAGTAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 555
Score = 182 bits (98), Expect = 1e-44
Identities = 114/122 (93%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 1506 GAAGGAAGAACTCAAGAACTTGAAGAAAAAGTGCTCGGACACAGAAGCTCTACTTGAGAA 1565
|||||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||
Sbjct 1569 GAAGGAAGAACTCAAGGACTTGAAGCAAAAGTGCTCGGACACAGAAGCTCTGCTCGAGAA 1628
Query 1566 AGAGAAGAAAAAGGTGTTGGCCGCCGCCAGAGCTCCTCCTCTAACGTTGAATGATTTTGT 1625
|||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| ||||
Sbjct 1629 AGAGAAGACAAAGGTGTTGGCCGCCGCCAGAGCTCCTCCTCTAACCTTGGATGATGTTGT 1688
Query 1626 CT 1627
||
Sbjct 1689 CT 1690
Score = 147 bits (79), Expect = 4e-34
Identities = 87/91 (96%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 882 GAAAGAAGAACTCAAGGACTTGAAGCAAAAATGCTCGGACACAGAAGCTCTACTTGAGAA 941
||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 1569 GAAGGAAGAACTCAAGGACTTGAAGCAAAAGTGCTCGGACACAGAAGCTCTGCTCGAGAA 1628
Query 942 AGAGAAGACAAAGGTGTTGGCCGCCGCCAGA 972
|||||||||||||||||||||||||||||||
Sbjct 1629 AGAGAAGACAAAGGTGTTGGCCGCCGCCAGA 1659
> AT3G44790.1 | Symbols: | TRAF-like family protein | chr3:16328792-16330265
FORWARD LENGTH=975
Length=975
Score = 787 bits (426), Expect = 0.0
Identities = 752/903 (83%), Gaps = 47/903 (5%)
Strand=Plus/Plus
Query 1 ATGGGGAATGAGAAATTCACTTGGGTGATTAAGAATTTCTGTTCTTTGCAATCTGAGTCC 60
|||||| ||||||| ||||||||||||||||||||||||| |||||||||||| ||| |
Sbjct 1 ATGGGGTATGAGAAGTTCACTTGGGTGATTAAGAATTTCTCATCTTTGCAATCTAAGTAC 60
Query 61 ATTAATTCTGATGTATTCGTGATCGGTGGCTGCAAATGGTATCTTGCGGCTTATCCCAAA 120
|||||||||||| |||||| ||||||||||||||||||| |||| || ||| | |
Sbjct 61 ATTAATTCTGATAAATTCGTTATCGGTGGCTGCAAATGGTTTCTTAAGGGATAT--C--A 116
Query 121 GGAAAATATAAGGCTGATTATTTGTTTCTATTTCTGGTGGTAGCTGA-TTTTAAAACTTT 179
| | || ||| ||||||||| ||| |||||| |||| ||| | || ||||| ||
Sbjct 117 -G---A-AT---GCTAATTATTTGTCTCTGTTTCTGATGGTTGCT-ACTTCAAAAACATT 167
Query 180 GCCATATGGATGGAAAAGACACATAAGATATCGCCTAACT-TTCGTAAATCAAATCTCCT 238
||| | |||||||| |||| ||| | ||| |||||||||| || ||||||||| | |||
Sbjct 168 GCCTTGTGGATGGAGAAGATACACACGATTTCGCCTAACTGTT-GTAAATCAACTTTCCG 226
Query 239 ATGGACTCTCCCTACTAGGAGGAAA-AGAAGA-ATGGATAG-GTAAATACCG-TCCTCTC 294
||| ||| |||| || | || |||| ||| | |||| | | ||| | || | ||||
Sbjct 227 ATGAACTTTCCCAACAACGA-GAAACGGAA-ACATGGTTTGACCAAA-A-CGTTGTTCTC 282
Query 295 TGC-GGGTATCAAAAAATGA-TTCTTCTTACCAAACTTAATGAC-AA-AAAGGGTGGATT 350
| | ||| ||| | | |||| ||| |||||||||||||||| | || ||| ||||||||
Sbjct 283 T-CTGGGAATCGACACATGATTTC-CCTTACCAAACTTAATG-CGAAGAAA-GGTGGATT 338
Query 351 TCTTGTGAACAATGAAGTCAAGATTGTTGTGGAGGTAGATGTTCTTCAAGTGATTGGCAA 410
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 339 TCTTGTGAACAATGAAGTCAAGATTGTTGTGGAGGTTGATGTTCTTCAAGTTATTGGCAA 398
Query 411 ATTAGATGTTTCTGAGGAATCTCAAGAGGTAACTCAACCTCTGAAAAGGATAAAGCTAAA 470
|||||||||||| |||| ||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 399 ATTAGATGTTTCAGAGGGATCTCAAGAAGTAACTCAACCTCTGAAAAGGATAAGGCTAAA 458
Query 471 TGGTGATGGTGTG---GTAACTTCAT--CAGTAGATGTCAATGGCTTTCAAGTTCTTCCT 525
| ||||||||| |||| || || | ||||||||||| ||||| |||||||||
Sbjct 459 CGATGATGGTGTTTCCGTAAAA-CAAAGCATT-GATGTCAATGGGTTTCAGGTTCTTCCT 516
Query 526 TCAGAGGCGGAATCTGTGAAACGCATATTCGAAAAACACCCAGAA-ATGGCACTAAAGTT 584
||| ||| |||||| |||||||| || || |||| ||||||| || ||||||||| ||||
Sbjct 517 TCACAGGTGGAATCGGTGAAACGTATCTTTGAAAGACACCCA-AACATGGCACTAGAGTT 575
Query 585 CCGGGCAAAGAACCAACATCTGAGGACATCATGCATAAATGTCGTCCTCAACCTAATCAA 644
||| ||||||||||||||| ||||||||||||| || |||||| |||||| ||||||| |
Sbjct 576 CCGAGCAAAGAACCAACATGTGAGGACATCATGTATGAATGTCCTCCTCAGCCTAATCGA 635
Query 645 AACGTTGTGTCAATCACTGCAAGACATTTCCATTGATGACATGGGACAAGCAGAGCAAGC 704
|| |||| || ||||||||||||||||||||||||||| |||| || |||||| ||||
Sbjct 636 TACACTGTGCCAGTCACTGCAAGACATTTCCATTGATGACCTGGGCCAGGCAGAGAAAGC 695
Query 705 ACTAACATATCTGAATA-ATTCGGGCTTTAAGGTGGATTGGTTGGAGGGTAAACTGGAGG 763
||||| ||| ||||| | |||||| |||||||||||||||||| ||| ||||| ||||||
Sbjct 696 ACTAAGATACCTGAA-AGATTCGGACTTTAAGGTGGATTGGTTAGAGCGTAAATTGGAGG 754
Query 764 AAGTAAAGGAAAAGAAGATGGAAGAGCTGTTTGGTAAGACTCGGATGCAAGAATTAGAGG 823
|||| |||||||||||||||||||||| | |||||||| |||||||||||||| ||||||
Sbjct 755 AAGTGAAGGAAAAGAAGATGGAAGAGCAGATTGGTAAGTCTCGGATGCAAGAACTAGAGG 814
Query 824 AAGAACTCAAGGTCTTTAAA-AGAAAGTGCTCTGACATAGAAGCT-ATACTGGAGAAAGA 881
|||| || ||| |||| || |||| ||||||||||||||||||| | ||||||||||||
Sbjct 815 AAGAGCTGAAGATCTTCAAGCAGAA-GTGCTCTGACATAGAAGCTCA-ACTGGAGAAAGA 872
Query 882 GAA 884
|||
Sbjct 873 GAA 875
Score = 329 bits (178), Expect = 4e-89
Identities = 318/380 (84%), Gaps = 31/380 (8%)
Strand=Plus/Plus
Query 1255 CTCAACCTAATCGAGACGA-TGTGTGTGTCACTGCAAGACCTTTCCATAT-ATGACTTGG 1312
|||| ||||||||| || | |||| ||||||||||||| ||||||| | ||||| |||
Sbjct 622 CTCAGCCTAATCGATAC-ACTGTGCCAGTCACTGCAAGACATTTCCAT-TGATGACCTGG 679
Query 1313 GCCAAGCAGAGCAAGCACTAACATACCTGAATA-ATTCGGGA-TTTAAGGTGGATTGGTT 1370
|||| |||||| ||||||||| ||||||||| | |||| ||| |||||||||||||||||
Sbjct 680 GCCAGGCAGAGAAAGCACTAAGATACCTGAA-AGATTC-GGACTTTAAGGTGGATTGGTT 737
Query 1371 GGAGCGTAAACTGGAGGAAGTAAAGGAAAAGAAGATGGAAGAGCACATTGGTAAGTCTCG 1430
||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 738 AGAGCGTAAATTGGAGGAAGTGAAGGAAAAGAAGATGGAAGAGCAGATTGGTAAGTCTCG 797
Query 1431 GATGCAAGAATTAGAGAAAGACCTGAAGCTCTTCAAGCAGAAGTGCTCTGACATAGAAGA 1490
|||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||
Sbjct 798 GATGCAAGAACTAGAGGAAGAGCTGAAGATCTTCAAGCAGAAGTGCTCTGACATAGAAGC 857
Query 1491 TCTACTGGAGAAAGAGAAGGAAGAACTCAAGAACTTGAAGAAAAAGTGCTCGGACACAGA 1550
|| |||||||||||||||| | || || | ||||| |||| |||
Sbjct 858 TCAACTGGAGAAAGAGAAG------C--AA-AA---G---------TGCTCAGACATAGA 896
Query 1551 AGCTCTACTTGAGAAAGAGAAGAAAAAGGT-GTTGGCCGCCGCCAGAGCTCCTCCTCTAA 1609
|||| | || |||||||||||| |||| | ||||||||| |||||||||||||||||||
Sbjct 897 AGCTTTGCTGGAGAAAGAGAAGGCAAAG-TCGTTGGCCGCTGCCAGAGCTCCTCCTCTAA 955
Query 1610 CGTTGAATGATTTTGTCTGA 1629
||||| ||||| |||| |||
Sbjct 956 CGTTGGATGATGTTGTTTGA 975
Score = 283 bits (153), Expect = 3e-75
Identities = 207/232 (89%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 1024 ATGATTTCCCTTACCAAACTTAATGCCAAAG-AAGGTGGATTTCTTGTGAACAATGAAGT 1082
||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||
Sbjct 298 ATGATTTCCCTTACCAAACTTAATG-CGAAGAAAGGTGGATTTCTTGTGAACAATGAAGT 356
Query 1083 CAAGATTGTTGCGGAGGTTTATGTTCTTCAAGTTATTGGCAATTTAGATGTTTTAGAGGG 1142
||||||||||| ||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 357 CAAGATTGTTGTGGAGGTTGATGTTCTTCAAGTTATTGGCAAATTAGATGTTTCAGAGGG 416
Query 1143 ATCTCAAGACGTAACTAAACCTCTGAAAAGGATAAGGCTAAATGATGATGGTGCAGCGTC 1202
||||||||| |||||| ||||||||||||||||||||||||| |||||||||| | |
Sbjct 417 ATCTCAAGAAGTAACTCAACCTCTGAAAAGGATAAGGCTAAACGATGATGGTGTTTC--C 474
Query 1203 TAGTCATTTGCAAACCATGGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
|| | |||| ||| ||||||||||||||||| |||||||||||||||
Sbjct 475 --GTAAAA--CAAAGCATTGATGTCAATGGGTTTCAGGTTCTTCCTTCACAG 522
> AT3G44805.1 | Symbols: | TRAF-like superfamily protein | chr3:16350395-16351437
FORWARD LENGTH=747
Length=747
Score = 383 bits (207), Expect = 3e-105
Identities = 300/345 (87%), Gaps = 6/345 (2%)
Strand=Plus/Plus
Query 486 AACTTCATCAGTAGATGTCAATGGCTTTCAAGTTCTTCCTTCAGAGGCGGAATCTGTGAA 545
|||||||||||| ||||||||||| |||| ||||||||||||| | | |||||||| |||
Sbjct 141 AACTTCATCAGTCGATGTCAATGGGTTTCTAGTTCTTCCTTCACAAGTGGAATCTGCGAA 200
Query 546 ACGCATATTCGAAAAACACCCAGAAATGGCACTAAAGTTCCGGGCAAAGAACCAACATCT 605
|| |||||||||| |||| |||| |||||||| ||||||| |||||||||||| || |
Sbjct 201 ACTTATATTCGAAAGACACTCAGACATGGCACTGGAGTTCCGAGCAAAGAACCAATATGT 260
Query 606 GAGGACATCATGCATAAATGT-CGTCCTCAACCTAATCAAAACGTTGTGTCAATCACTGC 664
|||||||||||| || ||||| | |||||| ||||||| | || |||| || |||||||
Sbjct 261 GAGGACATCATGTATGAATGTAC-TCCTCAGCCTAATCGATACACTGTGCCAGTCACTGC 319
Query 665 AAGACATTTCCATTGATGACATGGGACAAGCAGAGCA-AGCACTAACATATCTGAATA-A 722
|||| |||||||||||||| | || ||||||||| | |||||||||||| ||||| | |
Sbjct 320 AAGATTTTTCCATTGATGACCTCGGCCAAGCAGAG-AGAGCACTAACATACCTGAA-AGA 377
Query 723 TTCGGGCTTTAAGGTGGATTGGTTGGAGGGTAAACTGGAGGAAGTAAAGGAAAAGAAGAT 782
||| | |||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 378 TTCAGACTTTAAGGTGGATTGGTTGGAGCGTAAACTGGAAGAAGTAAAGGAAAAGAAGAT 437
Query 783 GGAAGAGCTGTTTGGTAAGACTCGGATGCAAGAATTAGAGGAAGA 827
||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 438 AGAAGAGCAGATTGGTAAGACTCGGATGCAAGAATTAGAGGAAGA 482
Score = 226 bits (122), Expect = 6e-58
Identities = 177/202 (88%), Gaps = 10/202 (5%)
Strand=Plus/Plus
Query 1255 CTCAACCTAATCGAGACGA-TGTGTGTGTCACTGCAAGACCTTTCCATAT-ATGACTTGG 1312
|||| ||||||||| || | |||| |||||||||||| ||||||| | ||||| | |
Sbjct 286 CTCAGCCTAATCGATAC-ACTGTGCCAGTCACTGCAAGATTTTTCCAT-TGATGACCTCG 343
Query 1313 GCCAAGCAGAGCA-AGCACTAACATACCTGAATA-ATTCGGGA-TTTAAGGTGGATTGGT 1369
||||||||||| | |||||||||||||||||| | |||| || ||||||||||||||||
Sbjct 344 GCCAAGCAGAG-AGAGCACTAACATACCTGAA-AGATTC-AGACTTTAAGGTGGATTGGT 400
Query 1370 TGGAGCGTAAACTGGAGGAAGTAAAGGAAAAGAAGATGGAAGAGCACATTGGTAAGTCTC 1429
|||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| |||
Sbjct 401 TGGAGCGTAAACTGGAAGAAGTAAAGGAAAAGAAGATAGAAGAGCAGATTGGTAAGACTC 460
Query 1430 GGATGCAAGAATTAGAGAAAGA 1451
||||||||||||||||| ||||
Sbjct 461 GGATGCAAGAATTAGAGGAAGA 482
Score = 150 bits (81), Expect = 3e-35
Identities = 106/118 (90%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1019 AAGAAATGATTTC-CCTTACCAAACTTAATGCCAAAGAAGGTGGATTTCTTGTGAACAAT 1077
|||||||| | | |||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 602 AAGAAATG-CTACTCCTTTCCGAACTTAATGCCAAAGAAGGTGGATTTCTTGTGAACAAT 660
Query 1078 GAAGTCAAGATTGTTGCGGAGGTTTATGTTCTTCAAGTTATTGGCAATTTAGATGTTT 1135
|||||||||||| |||| ||||| |||||||||| ||||||||||| ||||||||||
Sbjct 661 GAAGTCAAGATTATTGCAGAGGTAGATGTTCTTCAGGTTATTGGCAAATTAGATGTTT 718
Score = 148 bits (80), Expect = 1e-34
Identities = 114/130 (88%), Gaps = 4/130 (3%)
Strand=Plus/Plus
Query 308 AAATGATTCTTCTTACCAAACTTAATGACAAA-AAGGGTGGATTTCTTGTGAACAATGAA 366
||||| | || ||| || ||||||||| |||| || ||||||||||||||||||||||||
Sbjct 605 AAATGCTACTCCTTTCCGAACTTAATGCCAAAGAA-GGTGGATTTCTTGTGAACAATGAA 663
Query 367 GTCAAGATTGTTGTGGAGGTAGATGTTCTTCAAGTGATTGGCAAATTAGATGTTTCTGAG 426
||||||||| ||| ||||||||||||||||| || |||||||||||||||||||||||
Sbjct 664 GTCAAGATTATTGCAGAGGTAGATGTTCTTCAGGTTATTGGCAAATTAGATGTTTCTGAA 723
Query 427 GAAT-CTCAA 435
||| |||||
Sbjct 724 -AATACTCAA 732
> AT3G58430.1 | Symbols: | TRAF-like family protein | chr3:21613163-21616183
REVERSE LENGTH=1617
Length=1617
Score = 182 bits (98), Expect = 1e-44
Identities = 262/339 (77%), Gaps = 20/339 (6%)
Strand=Plus/Plus
Query 496 GTAGATGTCAATGGCTTTCAAGTTCTTCCTTCAGAGGCGGAATCTGTGAAACGCA-TATT 554
||||||||||||||||||||||||||||||||| ||| ||||| ||||| | || ||||
Sbjct 985 GTAGATGTCAATGGCTTTCAAGTTCTTCCTTCACAGGTGGAATATGTGAGAT-CAATATT 1043
Query 555 CGAAAAACACCCAGAAATGGCACTAAAGTTCCGGGCAAAGAACCAACATCTGAGGACATC 614
|||| |||||| || || ||| || ||||||| ||||||||||||||||||||||||||
Sbjct 1044 TGAAAGACACCCTGACATTGCAGTAGAGTTCCGAGCAAAGAACCAACATCTGAGGACATC 1103
Query 615 ATGCATAAATGT-CGTCCTCAACCTAATCAAAACGTTGTGTCAATCACT-GCAAGA-CAT 671
|||||| | | | | | || | |||| | || |||| || ||||| | |||| | |
Sbjct 1104 ATGCATGATTTTTC-TGCTTAGTTTAATTGAGACACTGTGCCAGTCACTTG-AAGAGC-T 1160
Query 672 TTCCATTGATGA-CATG-GGACAAGCAGAGCAA-GCACTAACATATCTGAATA-ATTCGG 727
|| | ||| || | || ||| | ||||| || ||| | |||||| |||| | || | |
Sbjct 1161 CTCAAATGAAGATCTTGTGGA-A-GCAGA-CATTGCATTGACATATGTGAA-AGATGCAG 1216
Query 728 GCTTTAAGGTGGATTGGTTGGAGG-GTAAACTGGAGGAAGTAAAGGAAAAGAAG-ATGGA 785
| ||||||||||||||||||||| | || ||||| ||||||| ||||||||| | | |
Sbjct 1217 GATTTAAGGTGGATTGGTTGGAGAAG-AAGCTGGACCAAGTAAAAGAAAAGAAGGA-GAA 1274
Query 786 AGAGCTGTTTGGTAAGACTCGGATGCAAGAATTAGAGGA 824
||| |||| || || | || | | |||||| | |||||
Sbjct 1275 AGAACTGTCTGATATGGTTCAGCTACAAGAAATGGAGGA 1313
> AT3G58370.1 | Symbols: | TRAF-like family protein | chr3:21595774-21596538
REVERSE LENGTH=660
Length=660
Score = 119 bits (64), Expect = 1e-25
Identities = 136/170 (80%), Gaps = 8/170 (5%)
Strand=Plus/Plus
Query 1033 CTTACCAAACTTAATGCCAAAGAA-GGTGGATTTCTTGTGAAC-AATGAAGTCAAGATTG 1090
||| |||| ||| |||||||| || | ||| | |||||||||| | |||||||||||||
Sbjct 10 CTTCCCAACCTTCATGCCAAA-AATGCTGGGTATCTTGTGAACGGA-GAAGTCAAGATTG 67
Query 1091 TTGCGGAGGTTTATGTTCTTCAAGTTATTGGCAATTTAGATGTTTTAGAGGGATCT-CA- 1148
||| |||| | ||| |||| ||||||||||||| |||||||| | ||| | |||| |
Sbjct 68 TTGTGGAGATAAATGATCTTGAAGTTATTGGCAAGTTAGATGTATCAGAAGAATCTGAAG 127
Query 1149 AGACGTAACTAAACCTCTGAAAAGGATAAGGCTAAATGATGATGGTGCAG 1198
|||| ||| |||||||||||| ||||| |||| ||||| ||| |||||
Sbjct 128 AGAC-AAAC-CAACCTCTGAAAAAGATAAAGCTAGATGATAATGATGCAG 175
> AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:21564450-21566482
REVERSE LENGTH=1636
Length=1636
Score = 71.3 bits (38), Expect = 3e-11
Identities = 40/41 (98%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 1214 AAACCATGGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
||||||||||| |||||||||||||||||||||||||||||
Sbjct 964 AAACCATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAG 1004
> AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:1976918-1978553
FORWARD LENGTH=1082
Length=1082
Score = 71.3 bits (38), Expect = 3e-11
Identities = 40/41 (98%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 1214 AAACCATGGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
||||||| |||||||||||||||||||||||||||||||||
Sbjct 625 AAACCATAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 665
> AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:21597799-21599568
REVERSE LENGTH=1236
Length=1236
Score = 67.6 bits (36), Expect = 4e-10
Identities = 40/42 (95%), Gaps = 0/42 (0%)
Strand=Plus/Plus
Query 1213 CAAACCATGGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
|||| ||| |||||||||||||||||||||||||||||||||
Sbjct 615 CAAATCATTGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 656
> AT1G31380.1 | Symbols: | TRAF-like family protein | chr1:11240451-11241099
REVERSE LENGTH=528
Length=528
Score = 65.8 bits (35), Expect = 1e-09
Identities = 39/41 (95%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 1214 AAACCATGGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
||| |||| ||||||||||||||||||||||||||||||||
Sbjct 137 AAAGCATGTATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 177
> AT1G31370.1 | Symbols: | Ubiquitin-specific protease family
C19-related protein | chr1:11238298-11239363 REVERSE LENGTH=582
Length=582
Score = 65.8 bits (35), Expect = 1e-09
Identities = 39/41 (95%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 1214 AAACCATGGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
||| ||| |||||||||||||||||||||||||||||||||
Sbjct 323 AAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 363
> AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:11243191-11244392
REVERSE LENGTH=807
Length=807
Score = 60.2 bits (32), Expect = 6e-08
Identities = 38/41 (93%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 1214 AAACCATGGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
||| ||| ||| |||||||||||||||||||||||||||||
Sbjct 461 AAAGCATCGATATCAATGGGTTTCAAGTTCTTCCTTCACAG 501
> AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:11245225-11246481
REVERSE LENGTH=837
Length=837
Score = 60.2 bits (32), Expect = 6e-08
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Plus
Query 1223 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
||||||||||||||||||||||||||||||||
Sbjct 461 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 492
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80471473635
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5