BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg897260 Length=882 Score E Sequences producing significant alignments: (Bits) Value AT3G44810.1 | Symbols: | F-box family protein | chr3:16358496-... 237 1e-61 > AT3G44810.1 | Symbols: | F-box family protein | chr3:16358496-16359983 REVERSE LENGTH=1347 Length=1347 Score = 237 bits (128), Expect = 1e-61 Identities = 148/158 (94%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 722 AGTGTCAAGGAAGTGACAACGAGCTGAAACACATTAGCCATTTCTTACTGAAAATGGAGT 781 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1166 AGTGTCAAGGAACTGAAAACGAGCTGAAACACATTAGCCATTTCTTACTGAAAATGGAGT 1225 Query 782 GTCTTCAACTGGTGCATGTTAACTTTTCAGAGACAATTGTTGACTCCAAAAAGGTGCAAC 841 |||||||| ||||||| || || ||||||||||||||||||||||||||||||||||||| Sbjct 1226 GTCTTCAATTGGTGCAAGTCAATTTTTCAGAGACAATTGTTGACTCCAAAAAGGTGCAAC 1285 Query 842 TCACAGAGGATTTGTTTAAGCTTCCCTCAGCTTCATCC 879 ||||||||||| || | ||||||||||| ||||||||| Sbjct 1286 TCACAGAGGATCTGATGAAGCTTCCCTCTGCTTCATCC 1323 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43050663979 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5