BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg897265
Length=1647
Score E
Sequences producing significant alignments: (Bits) Value
AT3G44850.1 | Symbols: | Protein kinase superfamily protein | ... 2407 0.0
AT5G22840.1 | Symbols: | Protein kinase superfamily protein | ... 1266 0.0
AT3G53030.1 | Symbols: SRPK4 | ser/arg-rich protein kinase 4 | ... 292 6e-78
> AT3G44850.1 | Symbols: | Protein kinase superfamily protein
| chr3:16374617-16376931 REVERSE LENGTH=1605
Length=1605
Score = 2407 bits (1303), Expect = 0.0
Identities = 1507/1606 (94%), Gaps = 11/1606 (1%)
Strand=Plus/Plus
Query 1 ATGGCGGAGGaaaaaaaCGGCGGACGTGTGAACGACGAAACTGAATACTCATCGGAGGAC 60
||||||||||| |||||| |||||||||||| ||||||| ||| ||||| |||||||||
Sbjct 1 ATGGCGGAGGACAAAAACAACGGACGTGTGAATGACGAAAGTGAGTACTCGTCGGAGGAC 60
Query 61 GAAGGTACGGAGGATTATAAGAAAGGAGGATACCATACGGTGAGAGTTGGTGATACTTTT 120
||||| || ||||||||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct 61 GAAGGAACAGAGGATTATAAGAAAGGAGGATACCATACAGTAAGAGTCGGTGATACTTTT 120
Query 121 AAAAATGGAGCTTATGTGATTCAGAGTAAGCTTGGTTGGGGACATTTCTCTACTGTTTGG 180
|| |||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct 121 AAGAATGGAGCTTATGTGATTCAGAGTAAACTTGGTTGGGGGCATTTCTCCACTGTTTGG 180
Query 181 CTTGCTTGGGACACTCAAGAATCGCGTTATGTAGCTTTGAAAGTTCAGAAGAGCGCTCAA 240
||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 181 CTTGCTTGGGATACGCAAGAATCGCGTTATGTAGCTTTGAAAGTTCAGAAGAGTGCTCAA 240
Query 241 CACTATACAGAGGCAGCAATGGATGAGATAAAGATTCTGAAACAGATTGCTGAAGGTGAC 300
|| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 241 CATTATACAGAGGCAGCAATGGATGAGATAAAGATTTTGAAACAGATAGCTGAAGGTGAC 300
Query 301 CCGGGTGATAAGAAGTGTGTTGTAAAGCTACTGGATCATTTCAAGCATTCGGGTCCTAAT 360
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 301 TCGGGTGATAAGAAGTGTGTTGTAAAGCTACTGGATCATTTCAAGCATACGGGTCCTAAT 360
Query 361 GGGAAACATGTTTGTATGGTTTTTGAGTATTTGGGAGATAACCTTTTGTCAGTTATTAAG 420
||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 361 GGGAAGCATGTTTGTATGGTTTTCGAGTATTTGGGAGATAACCTTTTGTCGGTTATTAAG 420
Query 421 TACAGTGATTACCGAGGGGTTCCTCTTCACATGGTTAAAGATCTCTGTTTTCATATTTTG 480
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 421 TACAGTGATTACCGAGGGGTTCCTCTTCACATGGTTAAAGAGCTTTGTTTTCATATTTTG 480
Query 481 GTTGGGTTGGATTATCTTCATCGTGAGCTCTCTATTATTCATACTGATTTAAAGCCGGAG 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 481 GTTGGGTTGGATTATCTTCATCGTGAGCTTTCTATTATTCATACTGATTTAAAGCCGGAG 540
Query 541 AATGTTCTGCTTTTGTCTACGATTGATCCATCAAGAGATGCT-CGGAGGTCGGGTGTTCC 599
||||||||||||||||||||||||||||| || ||||||| | |||| || ||||||||
Sbjct 541 AATGTTCTGCTTTTGTCTACGATTGATCCGTCGAGAGATG-TGAGGAGATCAGGTGTTCC 599
Query 600 ACTTGTTCTGCCAACCGCCAAGGACAAAATTGTTTCTGAGGCTGCTGCTAAACCTGAAAC 659
|||||||||||| | |||||||||| |||||||||||| |||||| ||||||||||||
Sbjct 600 ACTTGTTCTGCCTATAACCAAGGACAAGATTGTTTCTGAGTCTGCTGTTAAACCTGAAAC 659
Query 660 TAAGAGTTATACGTATGATGGGGATTTGACAAAGAATCAGAAAAAGAAGATTCGTAAGAA 719
||| ||||||||||| |||| |||||||||||||||||||| |||||||||||||||||
Sbjct 660 TAAAAGTTATACGTACAATGGTGATTTGACAAAGAATCAGAAGAAGAAGATTCGTAAGAA 719
Query 720 AGCGAAGAAGGTGGTGGTGGCTCAAGATTGTGGTGGAGAGGAAGCTTTAGAAGAAAATGA 779
||||||||| ||||||||||||||||| |||||||||||||||||| ||||||| |||
Sbjct 720 AGCGAAGAA---GGTGGTGGCTCAAGATTTTGGTGGAGAGGAAGCTTTGGAAGAAAGTGA 776
Query 780 AAGAGATTCTAACTCCGAAGCAAGAACAAATGGCAATTCCACTGTAGAGAGATCGGAAGG 839
||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||
Sbjct 777 GAGAGATTCTAACTCCGAAGCAAGAATAAATGGCAATTCCACCGTAGAGAGATCTGAAGG 836
Query 840 AAGTTCCACAAGATTAATGGAAGATGAAGAAGCCAGAGAGAAGGCTAACAAAAAGAATGG 899
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 837 AAGTTCCACAAGATTAATGGAAGGTGAAGAAGCCAGAGAGAAGGCTAACAAAAAGAATGG 896
Query 900 TCGGGGTAGTAGGAGAGGAAGCCGAACCACAAGGCAGAAATTACTGAGTGATATAGAGTG 959
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 897 TCGGGGTAGTAGGAGAGGAAGCCGATCCACAAGGCAGAAATTACTGAGTGATATAGAGTG 956
Query 960 CAAATGCAAATTAGTAGATTTTGGTAATGCTTGTTGGACATATAAACAGTTCACAAGCGA 1019
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 957 CAAATGCAAATTAGTAGATTTTGGGAATGCTTGTTGGACATATAAACAGTTCACAAGCGA 1016
Query 1020 TATTCAGACAAGGCAGTACCGATGTCCAGAGGTTGTTCTTGGATCAAAATACTCAACCTC 1079
|||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||
Sbjct 1017 TATTCAGACAAGACAGTATCGATGTCCAGAGGTTGTTCTTGGCTCAAAATACTCAACTTC 1076
Query 1080 TGCAGATATGTGGTCCTTTGCTTGTATTTGTTTCGAGCTGGCCACCGGAGATGTCCTATT 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 1077 TGCAGATATGTGGTCCTTTGCTTGTATTTGTTTCGAGCTGGCCACCGGAGATGTCTTGTT 1136
Query 1140 TGATCCTCACAGCGGTGAAAACTATGACCGGGATGAGGATCACCTGGCATTGATGATGGA 1199
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1137 CGATCCTCACAGTGGTGAAAATTATGACCGGGATGAGGATCACCTGGCATTGATGATGGA 1196
Query 1200 GCTTCTCGGGATGATGCCACGAAAGATTGCATTAGGTGGTCGATACTCGCGGGAtttttt 1259
|||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| ||
Sbjct 1197 GCTTCTAGGGATGATGCCACGAAAGATTGCATTAGGTGGTCGATACTCACGAGATTTCTT 1256
Query 1260 tAACCGACAAGGTGAACTAAGGCACATCCGGCGGTTGCGGTTTTGGCCCATCAGCAAAGT 1319
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 CAACCGACAAGGTGAGCTAAGGCACATCCGGCGGTTGCGGTTTTGGCCCATCAGCAAAGT 1316
Query 1320 CTTGAAGGAGAAATATGATTTCAGCGAGCAGGACGCAAAAGACATGGCAGATTTCTTAGT 1379
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1317 CTTGAAGGAGAAATATGATTTCAGCGAGCAGGACGCAAAAGACATGTCAGATTTCTTAGT 1376
Query 1380 CCCAATTCTTGAATTTGTGCCTGAGAAGAGACCAACAGCCGCCCAATGCCTAACACACCC 1439
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1377 CACAATTCTTGAATTTGTGCCTGAGAAGAGACCAACAGCCGCCCAATGCCTAAAACACCC 1436
Query 1440 ATGGTTCACTCCAGGCCCAAGATTACTGGAACCATCATTGAAACCGCAACATCCAAAAGG 1499
|||||||| ||| ||||| ||||| || ||||| ||| ||||||| ||||| ||||||||
Sbjct 1437 ATGGTTCAATCCTGGCCCGAGATTGCTTGAACCGTCACTGAAACCACAACAACCAAAAGG 1496
Query 1500 AGAAG--GA-G---CAGCAAATGAGAACATAGAAAAGGAAAAGGACGAAAGAGAGGCAAT 1553
||||| || | |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1497 AGAAGAAGAAGGAGCAGCAAATGAGAACATAGAAAAGGAAAAGGACGAAAGAGAAGCAAT 1556
Query 1554 GGAGGCTGGTGTAGGGAATATCGCCATTGATGGCTCTGAACCGAAG 1599
||| |||||||||||||||||||| ||||||| |||||||||||||
Sbjct 1557 GGAAGCTGGTGTAGGGAATATCGCTATTGATGTCTCTGAACCGAAG 1602
> AT5G22840.1 | Symbols: | Protein kinase superfamily protein
| chr5:7630717-7633223 REVERSE LENGTH=2123
Length=2123
Score = 1266 bits (685), Expect = 0.0
Identities = 1348/1656 (81%), Gaps = 94/1656 (6%)
Strand=Plus/Plus
Query 1 ATGGCGGAGGaaaaaaaCGGCGGACGTGTGAACGACGAAACTGAATACTCATCGGAGGAC 60
|||||||| || || ||||| |||||| ||| |||| | ||| |||||||| ||||||
Sbjct 121 ATGGCGGATGAGAAGAACGGTGGACGTCTGAGTGACGCTAGTGACTACTCATCAGAGGAC 180
Query 61 GAAGGTACGGAGGATTATAAGAA-AGGAGGATACCATACGGTGAGAGTTGGTGATACTTT 119
||||| || || ||||| |||| |||||| ||||||||||| |||| |||||||||||
Sbjct 181 GAAGGAACAGAAGATTA-CAGAAGAGGAGGTTACCATACGGTTCGAGTCGGTGATACTTT 239
Query 120 TAAAAATGGAGCTTATGTGATTCAGAGTAAGCTTGGTTGGGGACATTTCTCTACTGTTTG 179
||| |||||| ||||||| ||||| |||||||||||||||||||||||||| ||||| ||
Sbjct 240 TAAGAATGGATCTTATGTCATTCAAAGTAAGCTTGGTTGGGGACATTTCTCCACTGTCTG 299
Query 180 GCTTGCTTGGGACACTCAAGAA-TCGCGTTATGTAGCTTTGAAAGTTCAGAAGAGCGCTC 238
||| ||||||||||||| || || || || |||||||||||| | |||||||| ||||
Sbjct 300 GCTCGCTTGGGACACTC-TCAACTCTCGATACGTAGCTTTGAAAATCCAGAAGAGTGCTC 358
Query 239 AACACTATACAGAGGCAGCAATGGATGAGATAAAGAT-TCTGAAACAGATTGCTGAAGGT 297
| ||||| || || || || ||||||||||||||||| | ||||||||||||| |||||
Sbjct 359 AGCACTACACTGAAGCGGCCATGGATGAGATAAAGATAT-TGAAACAGATTGCAGAAGGC 417
Query 298 GACCCGGGTGATAAGAAGTGTGTTGTAAAGCTACTGGATCATTTCAAGCATTCGGGTCCT 357
|| ||| ||||||||||||||||| ||||| || ||||||||||||||| | ||||||
Sbjct 418 GATGCGGAAGATAAGAAGTGTGTTGTGAAGCTTCTTGATCATTTCAAGCATGCTGGTCCT 477
Query 358 AATGGGAAACATGTTTGTATGGTTTTTGAGTATTTGGGAGATAACCTTTTGTCAGTTATT 417
|||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 478 AATGGGCAACATGTTTGTATGGTTTTTGAGTATTTGGGAGATAACCTCTTGTCGGTTATC 537
Query 418 AAGTACAGTGATTACCGAGGGGTTCCTCTTCACATGGTTAAAGATCTCTGTTTTCATATT 477
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 538 AAGTACAGTGATTACCGAGGGGTTCCTCTTCATATGGTTAAAGAGATCTGTTTTCATATC 597
Query 478 TTGGTTGGGTTGGATTATCTTCATCGTGAGCTCTCTATTATTCATACTGATTTAAAGCCG 537
|| ||||| |||||||||||||||||||| || |||||||||||||||||| | ||||||
Sbjct 598 TTAGTTGGTTTGGATTATCTTCATCGTGAACTTTCTATTATTCATACTGATATCAAGCCG 657
Query 538 GAGAATGTTCTGCTTTTGT-CTACGATTGATCCATCAAG-AGATGCTCGGAGGTCGGGTG 595
|||||| ||||||||| || | || ||||| || | ||| ||||||||||| ||||| |
Sbjct 658 GAGAATATTCTGCTTT-GTTCCACTATTGACCC-TGAAGCAGATGCTCGGAAATCGGG-G 714
Query 596 -TTCCACTTGTTCTGCCAACCGCCAAGGACAAAATTGTTTCTGAG-G-CT-GCTGCTAAA 651
|||| |||||||| ||||| | |||||||| |||| ||||| | | | || |||
Sbjct 715 ATTCCTCTTGTTCTTCCAACTGTGAAGGACAAGGCTGTTCCTGAGAGACCAGTTGAAAAA 774
Query 652 CCTGAAAC-TAAGAGTTATACGTAT-GATGGGGATTTGACAAAGAATCAGAAAAAGAAGA 709
||||| |||||||||||||||| | || ||||||||| ||||||||||| |||||||
Sbjct 775 GA-GAAACCTAAGAGTTATACGTATAG-TGCGGATTTGACTAAGAATCAGAAGAAGAAGA 832
Query 710 TTCGTAAGAAAGCGAAGAAGGTGGT-GGTGGCTCAAGATTGTGGTGGAGAGGAAGCTTTA 768
| ||||||||||| ||||| |||| ||| ||| || | | | | || | |
Sbjct 833 TCCGTAAGAAAGCTAAGAAAGTGGAAGGT---TCA-GA--G-G----A-A--AA--TG-A 875
Query 769 GAAGAAAATGAAAGAGATTCTAACTCCGAAGCAAGAACAAATGGCAATTCCACTGTAGAG 828
|| || | | ||||||||| || |||||| ||||||| ||| | ||||| |||
Sbjct 876 GA-GAGACTC-------TTCTAACTCTGAGGCAAGACCAAATGGAAATGCAACTGTGGAG 927
Query 829 AGATCGGAAG-GAAGTTCC-ACAAGATTAATGGAAGATGAAGAAGCCAGAGAGAAGGCTA 886
|| | ||||| || |||| | |||| ||| |||||| ||| | | | | | |
Sbjct 928 AGGTTGGAAGAGA-GTTCTGA-AAGAGTAA---AAGATGCAGA-GA-AT-GTTA-G--T- 975
Query 887 ACAAAAAGAATGGTCGGGGTAGTAGGAGAGGAAGCCGAA-CCACAAGGCAGAAA-TTACT 944
||||| || | ||||| | |||||||||||||| || |||| ||||| ||| |||||
Sbjct 976 -CAAAA-GA--GC-CGGGGAAATAGGAGAGGAAGCC-AATCCACGAGGCA-AAAGTTACT 1028
Query 945 -GAGTGATATAGAGT-GCAAATGCAAATTAGTAGATTTTGGTAATGCTTGTTGGACATAT 1002
| | ||| | || | | |||||||| || || |||||||| |||||||||||||| |||
Sbjct 1029 TGCG-GATGTTGA-TCGGAAATGCAAGTTGGTGGATTTTGGGAATGCTTGTTGGACTTAT 1086
Query 1003 AAACAGTTCACAAGCGATATTCAGACAAGGCAGTACCGATGTCCAGAGGTTGTTCTTGGA 1062
|||||||| || || |||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct 1087 AAACAGTTTACGAGTGATATTCAGACAAGACAGTACCGGTGTCCTGAGGTTGTTCTTGGC 1146
Query 1063 TCAAAATACTCAACCTCTGCAGATATGTGGTCCTTTGCTTGTATTTGTTTCGAGCTGGCC 1122
||||||||||||||||| || ||||||||||| |||||||| |||||||| ||||| |||
Sbjct 1147 TCAAAATACTCAACCTCAGCGGATATGTGGTCATTTGCTTGCATTTGTTTTGAGCTTGCC 1206
Query 1123 ACCGGAGATGTCCTATTTGATCCTCACAGCGGTGAAAACTATGACCGGGATGAGGATCAC 1182
||||||||||| ||||| ||||||||||| |||||||||| ||| || ||||||||||||
Sbjct 1207 ACCGGAGATGTTCTATTCGATCCTCACAGTGGTGAAAACTTTGAGCGAGATGAGGATCAC 1266
Query 1183 CTGGCATTGATGATGGAGCTTCTCGGGATGATGCCACGAAAGATTGCATTAGGTGGTCGA 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1267 TTGGCATTGATGATGGAGCTTCTCGGGATGATGCCACGAAAGATTGCATTAGGTGGACGC 1326
Query 1243 TACTCGCGGGAtttttttAACCGACAAGGTGAACTAAGGCACATCCGGCGGTTGCGGTTT 1302
| ||||||||||| || |||||||| ||||||||| |||||||| ||||||| ||||||
Sbjct 1327 CATTCGCGGGATTTCTTCAACCGACAGGGTGAACTACGGCACATCAGGCGGTTACGGTTT 1386
Query 1303 TGGCC-CATCAGCAAAGTCTTGA-AGGAGAAATATGATTTCAGCGAGCAGGACGCAAAAG 1360
||||| | | ||||| ||||| | || | |||||||| ||||||||| | ||||||| |
Sbjct 1387 TGGCCACTT-AGCAAGGTCTTAACAG-ATAAATATGACTTCAGCGAGGAAGACGCAATTG 1444
Query 1361 AC-ATGGCA-GATTTCTT-AGTCCCAATTCTTGAATTTGTGCCTGAGAAGAGACCAACAG 1417
| ||| || |||||| | | ||||| ||||| ||||||| |||||||||||||| || |
Sbjct 1445 -CTATG-CAAGATTTCATCACTCCCA-TTCTTCAATTTGTACCTGAGAAGAGACCGACGG 1501
Query 1418 CCGCCCAATGCCTAACACACCCATGGTTCACTCCAGG-CCC-AAGATTACTGGAACCATC 1475
| || || |||||||| ||||||||||| | ||| || ||| || || |||| |||| ||
Sbjct 1502 CTGCTCAGTGCCTAACGCACCCATGGTTGAATCC-GGTCCCTAA-ATCACTGAAACCGTC 1559
Query 1476 ATTGAAACCGCAACATCCAAAAGGAGAAG--GAGCA-GCAA---ATGAGAACATAGAAAA 1529
|| || || ||| |||| |||| ||||| ||| | || ||||| | | ||| ||
Sbjct 1560 ATCGAGTCCACAAAATCCCAAAGAAGAAGAAGAGGAAGCGTCGGATGAGGATAAAGATAA 1619
Query 1530 GGAAAAGGACGAAAGAGAGGCAATGGAGGCTGGTGTAGGGAATATCGCCATTGATGGCTC 1589
|||||||| || || || || |||||||| ||||| || ||||||||||||||||||||
Sbjct 1620 GGAAAAGGTTGAGAGGGAAGCCATGGAGGCAGGTGTTGGAAATATCGCCATTGATGGCTC 1679
Query 1590 TGAACCGAAGGTGGTAA-CGAGAGAAGGACGTCAAT 1624
||| ||| | | | | |||||||| |||||||
Sbjct 1680 GGAAA-GAAAGACCTCAGCAAGAGAAGGTCGTCAAT 1714
> AT3G53030.1 | Symbols: SRPK4 | ser/arg-rich protein kinase 4
| chr3:19662281-19664505 FORWARD LENGTH=1864
Length=1864
Score = 292 bits (158), Expect = 6e-78
Identities = 375/478 (78%), Gaps = 22/478 (5%)
Strand=Plus/Plus
Query 142 CAGAGTAAGCTTGGTTGGGGACATTTCTCTACTGTTTGGCT-TGCTTGGGACACTCAAGA 200
||||| || || |||||||| |||||||||||||||||||| | | ||||| ||||||
Sbjct 264 CAGAGCAAACTCGGTTGGGGCCATTTCTCTACTGTTTGGCTCT-CCTGGGATACTCAATC 322
Query 201 ATCGCGTTATGTAGCTTTGAAAGTTCAGAAGAGCGCTCAACACTATACAGAGGCAGCAAT 260
|| | ||||| |||||||| || || ||||| ||||| || ||||| || ||||| ||
Sbjct 323 CTCTAGATATGTGGCTTTGAAGGTGCAAAAGAGTGCTCAGCATTATACTGAAGCAGCCAT 382
Query 261 GGATGAGATAA-AGAT-TCTGAAACAGATTGCTGAAGGTGACCCGGGTGATAAGAAGTGT 318
||||||||||| | || | || |||||||||| || || ||| | | ||||| || |||
Sbjct 383 GGATGAGATAACA-ATAT-TGCAACAGATTGCAGAGGGAGACACTGATGATACCAAATGT 440
Query 319 GTTGTAAAGCTACTGGATCATTTCAAGCATTCGGGTCCTAATGGGAAACATGTTTGTATG 378
||||| ||||| ||||||||||||| || || ||||| ||||| | ||||| ||||||
Sbjct 441 GTTGTGAAGCTTTTGGATCATTTCAAACACTCAGGTCCGAATGGTCAGCATGTATGTATG 500
Query 379 GTTTTTGAGTATTTGGGAGATAACCTTTTGTCAGTT-ATTAAGTACAGTGATTACCGAGG 437
||||||||||||||||||||||| || || | ||| |||||||| ||||||||| ||
Sbjct 501 GTTTTTGAGTATTTGGGAGATAATCTGTTAAC-GTTGATTAAGTATTCTGATTACCGTGG 559
Query 438 GGTT-CCTCTTCAC-ATGGTTAA--AGATCTCTGTTTTCATATTTTGGTTGGGTTGGATT 493
|| ||| ||| | |||||||| |||| | |||| |||||| |||||||| || || |
Sbjct 560 C-TTACCTATTC-CTATGGTTAAGGAGAT-T-TGTTATCATATGTTGGTTGGTTTAGACT 615
Query 494 ATCTT-CATCGTGAGCTCTCTATTATTCATACTGATTTAAAGCCGGAGAATGTTCTGCTT 552
| ||| ||| |||| || ||||| ||||||||||| ||||| ||||||||| || ||
Sbjct 616 A-CTTGCATAAACAGCTTTCGATTATACATACTGATTTGAAGCCTGAGAATGTTTTG-TT 673
Query 553 TT-GTCTACGATTGATCCATC-AAGAGATGCTCGGAGGTCGGGTGTTCCACTTGTTCT 608
||| || |||||||| || || |||| | ||| ||| || | ||| ||||||||
Sbjct 674 ACCGTCAACTATTGATCCGTCTAA-AGATCCGAGGAAGTCTGGAGCTCCTCTTGTTCT 730
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81375083445
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5