BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg897300 Length=1434 Score E Sequences producing significant alignments: (Bits) Value AT4G21700.1 | Symbols: | Protein of unknown function (DUF2921)... 1615 0.0 > AT4G21700.1 | Symbols: | Protein of unknown function (DUF2921) | chr4:11529956-11532844 FORWARD LENGTH=2889 Length=2889 Score = 1615 bits (874), Expect = 0.0 Identities = 1078/1172 (92%), Gaps = 31/1172 (3%) Strand=Plus/Plus Query 1 ATGGCGACTTTTTGGCCA-CCTTCTTCATCTTCAAACTACCCTTCAATATTCCTTTATTT 59 |||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| Sbjct 1 ATGGCGACTTTTTGGCCATCC-TCTTCATCTTCAAACCACCCTTCAATATTCCTTTATTT 59 Query 60 ACAATCATACCCTTTTCTCTTCTTCCTCCTCTTTCTGACCACCTCTGCAACTTCACTCAC 119 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 60 ACAATCATACCCTTCTCTCTTCTTCCTCCTCTTTCTTACCACCTCTGCAACTTCACTCAC 119 Query 120 CCTTGCATCCTTAGTGAATCCTCACTCTTACATATCCCCACGAGTCCCTTATTCCGATCA 179 | ||||||||||||||||||||||||||| |||| | |||||| |||||||||||||||| Sbjct 120 CGTTGCATCCTTAGTGAATCCTCACTCTTTCATAGCTCCACGAATCCCTTATTCCGATCA 179 Query 180 CTGCAACCACATAGTTCCAGAGTCTCCGATCGACCCATCTCCCTCCGCCGTATTCAGCCG 239 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 180 CTGCAACCACATAGTTCCAGAGTCTCCGATCGACCCATCTCCCTCCGCTGTATTCAGCCA 239 Query 240 TGCGTCGCTTGCTTTCGATTTCAGCTTCTTCTCCGGCGGCGACTCT-TTCTTCAATCGGT 298 || ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||| Sbjct 240 CGCATCGCTTGCTTTCGATGTCAGCTTCTTCTCCGGCGGCGACT-TGTTCTTCAATCGGT 298 Query 299 ATCAATCACAGAATGGTGATGTTAAATCAGCTAGATTCAGACCCATGTCAATCCGCAAAA 358 |||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||| Sbjct 299 TTCAATCACAGAATGGTGATGTTAAATCAGCTAGATTTAGACCCAAATCAATCCGTAAAA 358 Query 359 CGTTGGGTGATGGGAAGATTTACAAGGTTGAAGAC-AAATTGACTTTACAAATCTCAAAA 417 | ||||| |||||||||||||||||||| |||| | |||||||||||||||||||| ||| Sbjct 359 CTTTGGGAGATGGGAAGATTTACAAGGTGGAAG-CGAAATTGACTTTACAAATCTCCAAA 417 Query 418 ACCTCAGCTTTTTCTTCTTATTACGGCGGCGATTTTGGCAAGAAAAAGCTTCAGGTAACG 477 ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 418 ACCTCTGCTTCTTCTTCTTATTACGGCGGCGATTTTGGCCAGAAAAAGCTTCAGGTAATG 477 Query 478 CATATCGACGGACGTAGCTCTTGGGGAGGAGCAAGTTTCGATTTTT-CTGGGTTTTGGTC 536 || ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 478 CAGATCGACGGACGTAGCTCTTGGGGAGGAGCAAGTTTCGATTTTTAC-GGGTTTTGGTC 536 Query 537 GGAATCTACAGGACAAGTTTGTATGGTTGGATCAACTCAAGTTTTATCTGTGGAAGGTAC 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 537 GGAATCTACAGGACAAGTTTGTATGGTTGGATCAACTCAAGTTTTATCTGTGGAAGGTAC 596 Query 597 T-GATTTGAAG-TCCTTTGATGCTCGTCTTATGCTTAATTATTCCAATGAGTCTAATATC 654 | | ||||||| || ||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 597 TCG-TTTGAAGATC-TTTGATGCTCGTCTTATGCTTAACTATTCCAAGGAGTCTAATATC 654 Query 655 TATGGAAGTTTGGTTAAGGGAGTGTTAGAGAGCGTGAATAGCC-AGAGTGAGTTTAAAAC 713 |||||||||||||||||||||||||||||||||||| |||||| | ||||| |||||||| Sbjct 655 TATGGAAGTTTGGTTAAGGGAGTGTTAGAGAGCGTGGATAGCCTA-AGTGAATTTAAAAC 713 Query 714 GATCTCGATTCTTGGTGCAAGAAACACTCCTTTGAACTATGAGTACAAGTTTTTGGAGCA 773 | | | ||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 714 GGTTTTGATTCTTGGTGCAAGAAACACTCCTTTGAACTATGAGTATAAGTTGTTAGAGCA 773 Query 774 ATCGAAATCAGATTGCGAGGTAAACAGTGGAGAGAGTTTGTCGTTAGAGAATGTTTTTGG 833 |||||| | ||||| | |||||| ||||||||||||||||||||||||||||||| || Sbjct 774 ATCGAAGTTGGATTGTGGGGTAAATGGTGGAGAGAGTTTGTCGTTAGAGAATGTTTTGGG 833 Query 834 AGGAATGTGTAAGGTTTTTGAAGGTA-ATAGTCATGTGTTTGGTTTGATGTATAGAACTG 892 |||||||||||| || |||||||||| | |||||||||||||||||||||||||||| || Sbjct 834 AGGAATGTGTAAAGTATTTGAAGGTAGA-AGTCATGTGTTTGGTTTGATGTATAGAAATG 892 Query 893 GTTGTGGGATTAACCATAGTTATAGTCCTTTTGGAAGTGATGTAGAGTACACACCAGGTT 952 ||||||| || ||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 893 ATTGTGGGGTTGACCATAGTTGTAGTCCTTTTGGAAGTGATGTAGAGTACACACCGGGTT 952 Query 953 TTATGTCGATGTTATCGTTTCTTTGTGACGGGGA-----T-----T--T---GTCATTTA 997 |||||||||||||||||||||| ||||| ||||| | | | |||||||| Sbjct 953 TTATGTCGATGTTATCGTTTCTGTGTGATGGGGAGAAGATGCGAATGCTTTTGTCATTTA 1012 Query 998 GTAACATAAGTAGTTATAGCAGGTTGTTTCCATTTGATCCGAGAACCAGTTTGGTTGCAG 1057 ||||||| || ||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 1013 GTAACATGAGCGGTTATAGTAGTTTGTTTCCATTTGATCCGAGAACCAGTTTGGTTGCAG 1072 Query 1058 AGGGAACTTGGGATGTGGAGAGGAATAGGTTCTGTGGTGTTGCGTGCAGGATCTTGAATT 1117 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1073 AGGGAAGTTGGGATGTAGAGAGGAATAGGTTCTGTGGTGTTGCGTGCAGGATCTTGAATT 1132 Query 1118 TCTCGGATTCTTTGAGTAATGCTGTGTTTGAT 1149 |||||||||||||||||||||||||| ||||| Sbjct 1133 TCTCGGATTCTTTGAGTAATGCTGTGGTTGAT 1164 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70682367360 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5