BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg897355
Length=819
Score E
Sequences producing significant alignments: (Bits) Value
AT3G45580.1 | Symbols: | RING/U-box protein with C6HC-type zin... 970 0.0
AT3G45570.1 | Symbols: | RING/U-box protein with C6HC-type zin... 765 0.0
AT3G43750.1 | Symbols: | RING/U-box protein with C6HC-type zin... 534 4e-151
AT3G45555.1 | Symbols: | RING/U-box protein | chr3:16712368-16... 407 9e-113
AT3G45560.1 | Symbols: | zinc finger (C3HC4-type RING finger) ... 322 3e-87
AT3G45540.1 | Symbols: | RING/U-box protein with C6HC-type zin... 276 3e-73
> AT3G45580.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16729989-16731511 REVERSE LENGTH=1227
Length=1227
Score = 970 bits (525), Expect = 0.0
Identities = 672/742 (91%), Gaps = 14/742 (2%)
Strand=Plus/Plus
Query 69 ATCTGCGTCTGAGCAAGAGAACATCGCTTTGCTAATGGATGATGTGCAACGCATTAGACA 128
|||||| |||| | |||||||| | || || ||||||||| | || |||| |||||||||
Sbjct 336 ATCTGCTTCTGCGGAAGAGAACTTTGCCTTACTAATGGATAACGTTCAACACATTAGACA 395
Query 129 ACGATTGACGTCTAGCTTTCCTGTTCTGGTGACTAGGAATCAAATGAAATTTGTGTATGA 188
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 396 ACGATTGACGTCTAGCTTTCCTGTTCTGGTGACTAGGAATCAAATTAAATTTGTGTATGA 455
Query 189 ACTTGCAATGGAAACAATAGTTTCTGAAATCAGCATACATATACCTGATCA-GAAGAAGA 247
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 456 ACTTGCAATGGAAACAATAGTTTCTGAAATCAGCATACATATACCTGATCATGAC-AAGA 514
Query 248 CTTGCAGTATTTGTTCCGATGATAACTTCGAACCTGAGCAGATGTTTTCTATTGATTTAT 307
|||||||||| |||||||||||||| ||||||||||||| |||||||||| ||| |||||
Sbjct 515 CTTGCAGTATATGTTCCGATGATAATTTCGAACCTGAGCTGATGTTTTCTGTTGCTTTAT 574
Query 308 GCGGTCATGAATTCTGTGTGGAGTGCATGAAACGACATATAGAAGTGAGGCTACTCGCGG 367
||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||
Sbjct 575 GCGGTCATGAATTCTGTGTTGAGTGCGTAAAACGACATATAGAAGTGAGGCTACTCGCGG 634
Query 368 GAGGTGTACCGAGATGTCCTCATTATCAATGC-AGGTCTAAACTTACTCTTGGAAGCTGT 426
|||||||||||||||||| ||||||||||||| || |||||||||||||||| || |||
Sbjct 635 GAGGTGTACCGAGATGTCTTCATTATCAATGCGAG-TCTAAACTTACTCTTGCAAACTGC 693
Query 427 GTCAATCTTTTGACATCTAAACTAAAAGCAATGTGGGAACGAATAATCGACGAGGAATCG 486
| |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct 694 GCCAATCTTTTGACATCTAAACTAAAAGCAATGTGGGAACTAAGGATCGAAGAGGAATCT 753
Query 487 ATTCATGTGGCGGACAGAGTTTATTGTCCAAACCCGAGGTGCTC-AGCCTTAATGTCGGT 545
|||| ||||| ||| ||||| ||||| || ||||| |||||||| || |||||||||||
Sbjct 754 ATTCCTGTGGAGGAGAGAGTATATTGCCCCAACCCTAGGTGCTCGAGT-TTAATGTCGGT 812
Query 546 AACCAAGCTCTCAAACTCAAACTCTACTAAAGAAGATGTAACTATGAGAAGCTGTTTCAA 605
|||||||||||||||||||| | | | ||||||||||||||||||||| ||| | ||
Sbjct 813 AACCAAGCTCTCAAACTCAA-C---A--AGAGAAGATGTAACTATGAGAAGTTGTGTAAA 866
Query 606 ATGCAGTGAACCCTTTTGTATCACCTGCAAAGTTCCGTGGCATAGCAACTTGTCGTGCAA 665
|||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 867 ATGCGGTGAACCCTTTTGTATCAACTGCAAACTTCCGTGGCATAGCAACTTGTCGTGCAA 926
Query 666 CGATTACAAGAGATTGGGTCCAAATCCTACAGCAGATGATATAAAGATGAAAGCTCTAGC 725
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 927 CGATTACAAGAGCTTGGGTCCAAATCCTACAGCAGATGATATAAAGCTGAAAGCTCTAGC 986
Query 726 ATATAAGAAAATGTGGCGTCAATGTGAAAATTGTCAACA-CATAATCGAACTTTCGGAAG 784
| || |||||||||||||||||||||||||||| ||| | | |||||||||| |||||||
Sbjct 987 AAATCAGAAAATGTGGCGTCAATGTGAAAATTG-CAAAAACGTAATCGAACTATCGGAAG 1045
Query 785 GATGCATCCATGTAACTTGCAG 806
||||||| ||| | ||||||||
Sbjct 1046 GATGCATGCATATCACTTGCAG 1067
> AT3G45570.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger domain | chr3:16725094-16726116 REVERSE LENGTH=939
Length=939
Score = 765 bits (414), Expect = 0.0
Identities = 574/649 (88%), Gaps = 20/649 (3%)
Strand=Plus/Plus
Query 69 ATCTGCGTCTGAGCAAGAGAACATCGCTT-TGCTAATGGATGATGTGCAACGCATTAGAC 127
||||| |||||||||||||||||| ||| || ||||||| ||||||||||| ||||||
Sbjct 303 ATCTGTTTCTGAGCAAGAGAACATC-CTTATGTTAATGGACGATGTGCAACGTATTAGAA 361
Query 128 AACGATTGACGTCTAGCTTTCCTGTTCTGG---TGACTAGGAATCAAA-TGAAATTTGTG 183
|||| || || |||||| |||||||||||| ||||||||||||||| || |||||||
Sbjct 362 AACGTTTAACATCTAGCGTTCCTGTTCTGGTCATGACTAGGAATCAAATTG-AATTTGTA 420
Query 184 TATGAACTTGCAATGGAAACAATAGTTTCTGAAATCAGCATACATATACCTGATCAGAAG 243
|||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| ||
Sbjct 421 TATGAACTTGCAATGGAAACAATAGTTTCTGAAATCCGCATAGATATGCCTGATCATAAC 480
Query 244 AAGACTTGCAGTATTTGTTCCGATGATAACT-TCGAACCTGAGCAGATGTTTTCTATTGA 302
|||||||| ||||| ||||||| ||| || | |||||||||||||||| ||||| |||
Sbjct 481 AAGACTTGTAGTATCTGTTCCGGTGACAA-TATCGAACCTGAGCAGATATTTTCCGTTGC 539
Query 303 TTTATGCGGTCATGAATTCTGTGTGGAGTGCATGAAACGACATATAGAAGTGAGGCTACT 362
|||||| ||||||||||||||| |||||||| |||||| |||||||||||||| ||||||
Sbjct 540 TTTATGTGGTCATGAATTCTGTATGGAGTGCGTGAAACAACATATAGAAGTGAAGCTACT 599
Query 363 CGCGGGAGGTGTACCGAGATGTCCTCATTATCAATGCAG-GTCTAAACTTACTCTTGGAA 421
| ||||||||||||||||||||| ||||||||||||| | |||||| |||||||||||||
Sbjct 600 CTCGGGAGGTGTACCGAGATGTCTTCATTATCAATGC-GAGTCTAACCTTACTCTTGGAA 658
Query 422 GCTGTGTCAATCTTTTGACATCTAAACTAAAAGCAATGTGGGAACGAATAATCGACGAGG 481
| |||| ||| ||||||||||||||||||||||||||||||||| || ||||| ||||
Sbjct 659 GTTGTGGAAATATTTTGACATCTAAACTAAAAGCAATGTGGGAACTAAGGATCGAAGAGG 718
Query 482 AATCGATTCATGTGGCGGACAGAGTTTATTGTCCAAACCCGAGGTGCTC-AGCCTTAATG 540
|||| |||| ||||||||| ||||||||||| |||||||| |||||| || ||||||
Sbjct 719 AATCTATTCCTGTGGCGGAGAGAGTTTATTGCCCAAACCCTCTGTGCTCGAG-TTTAATG 777
Query 541 TCGGTAACCAAGCTCTCAAACTCAAACTCTACTAAAGAAGATGTAACTATGAGAAGCTGT 600
||||||||||||||||||||||| || | | | |||||||||||||||||||| ||||
Sbjct 778 TCGGTAACCAAGCTCTCAAACTC-AA--C-A--AGAGAAGATGTAACTATGAGAACCTGT 831
Query 601 TTCAAATGCAGTGAACCCTTTTGTATCACCTGCAAAGTTCCGTGGCATAGCAACTTGTCG 660
|||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 832 GTCAAATGCGGTGAACCCTTTTGTATCAACTGCAAACTTCCGTGGCATAGCAACTTGTCG 891
Query 661 TGCAACGATTACAAGAGATTGGGTCCAAATCCTACAGCAGATGATATAA 709
||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 892 TGCAACGATTACAAGAGCTTGGGTCCAAATCCTACAGCAGAT-ATATAA 939
> AT3G43750.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger domain | chr3:15646460-15647566 FORWARD LENGTH=1041
Length=1041
Score = 534 bits (289), Expect = 4e-151
Identities = 587/726 (81%), Gaps = 40/726 (6%)
Strand=Plus/Plus
Query 79 GAGCAAGAGAACATCGCTTTGCTAATGGATGATGTGCAACGCATTAGACAACGATTGACG 138
|||||||| ||||| || |||||||| |||||||||||||||| ||||||| ||||| |
Sbjct 301 GAGCAAGATAACATTGCCATGCTAATGAATGATGTGCAACGCATGAGACAACAATTGA-G 359
Query 139 -TCTAGCT-TTCCTGTTCTGGTGACTAGGA-ATCAAATGAAATTTG-TGTATGAA-CTTG 193
| ||| | |||| |||||||||||| || ||||||| | |||| | ||| || ||||
Sbjct 360 ATATAG-TAATCCTATTCTGGTGACTA-GAGATCAAATTAGCTTTGCT-TAT-AAGCTTG 415
Query 194 CAATGGAAACAATAGTTTCTGAAATCAGCATACATATACCTGATCAGAAGAAGACTTGCA 253
||||||||||| ||||||| || ||||||||| ||| |||| | ||||||||
Sbjct 416 CAATGGAAACAGTAGTTTCCGAGATCAGCATATGTATGCCTG--C-------GACTTGCA 466
Query 254 GTATTTGTTCCGATGATAACTTCGAACCTGAGCAGATGTTTTCTATTGATTTATGCGGTC 313
| || |||| | || || || ||| ||||| ||||||||||| ||| | |||||||||
Sbjct 467 GCATCTGTTTCAATAATGTTTTGGAAGCTGAGAAGATGTTTTCTGTTGCTATATGCGGTC 526
Query 314 ATGAATTCTGTGTGGAGTGCATGAAACGA-CATATAGAAGTGAGGCTACTCGCGGGAGGT 372
|| ||||||||||||||||| |||||| | |||||||||||| |||||||| |||||||
Sbjct 527 ATCAATTCTGTGTGGAGTGCGTGAAAC-ATTATATAGAAGTGAAGCTACTCGAGGGAGGT 585
Query 373 GTACCGAGATGTCCTCATTATCAATGCAG-GTCTAAACTTACTCTTGGAAGCTGTGTCAA 431
||||||||||||| | ||||||||||| | |||||| || |||||| ||| |||| |||
Sbjct 586 GTACCGAGATGTCTTGATTATCAATGC-GAGTCTAAGCTAACTCTTACAAGTTGTGGCAA 644
Query 432 TCTTTTGACATCTAAACTAAAAGCAATGTGGGAA-CGAATAATCGACGAGGAATCGATTC 490
|||||| ||| |||||||||| || || | |||| | || ||||| ||||| | |||||
Sbjct 645 TCTTTTAACACCTAAACTAAAGGCGATAT-GGAAGCAAAGGATCGAAGAGGAGTTGATTC 703
Query 491 ATGTGGCGGACAGAGTTTATTGTCCAAACCCGAGGTGCTCAGCCTTAATGTCGGTAACCA 550
||| ||||| ||||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct 704 TTGTAGCGGAGAGAGTTTATTGTCCAAACCCGAGGTGCTCGGGATTAATGTCGAAAACCG 763
Query 551 AGCTCTCAAACTCAAACTCTACTAAAGAAGATGT-A--ACTATGAGAAGCTGT-TTCAAA 606
|||||| || | | || ||| |||||||||| | |||| || | ||| || |||
Sbjct 764 AGCTCT----CT-ACA-TCAACTGAAGAAGATGTAAGTACTAGGACTTGTTGTGTT-AAA 816
Query 607 TGCAGTGAACCCTTTTGTATCACCTGCAAAGTTCCGTGGCATAGCAACTTGTCGTGCAAC 666
||| ||||||||||||| |||| ||||||||||||||||||||| |||||||| ||| |
Sbjct 817 TGCGGTGAACCCTTTTGCATCAACTGCAAAGTTCCGTGGCATAGTAACTTGTCATGCGAT 876
Query 667 GATTACAAGAGATTGGGTCCAAATCCTACAGCAGATGATATAAAGATGAAAGCTCTAGCA 726
|||||||||||||||||||||||||||||| | ||||||||||| | |||| | | |||
Sbjct 877 GATTACAAGAGATTGGGTCCAAATCCTACAAAAAATGATATAAAGCTAAAAGTTTTGGCA 936
Query 727 TATAAG-AAAATGTGGCGTCAATGTGAAAATTGTCAACACATAATCGAACTT-TCGGAAG 784
|| || |||| |||| ||||||||| ||| || |||||||| || | || | ||| |||
Sbjct 937 AATCAGCAAAA-GTGGAGTCAATGTGCAAAGTGCCAACACATGATTGCACGTATCG-AAG 994
Query 785 GATGCA 790
||||||
Sbjct 995 GATGCA 1000
> AT3G45555.1 | Symbols: | RING/U-box protein | chr3:16712368-16713009
REVERSE LENGTH=642
Length=642
Score = 407 bits (220), Expect = 9e-113
Identities = 494/623 (79%), Gaps = 31/623 (5%)
Strand=Plus/Plus
Query 196 ATGGAAACAATAGTTTCTGAAATCAGCATACATATACCT-GATCAGAAGAAGACTTGCAG 254
||||||||||||| || |||||||||| ||| | | | |||| | ||||||||||
Sbjct 1 ATGGAAACAATAGATTGTGAAATCAGCTTAC-T-T--GTGGATC--CTG-AGACTTGCAG 53
Query 255 TATTTGTTCCGATGATAACTTCGAACCTGAGCAGATGTTTTCTATTGATTTATGCGGTCA 314
||| |||| | ||||| | ||| || ||||||| |||| || | ||| ||||||| |||
Sbjct 54 TATATGTTTCAATGATGATTTCAAATCTGAGCAAATGTATTATGTTGCTTTATGCAATCA 113
Query 315 TGAATTCTGTGTGGAGTGCATGAAACGACATATAGAAGTGAGGCTACTCGCGGGAGGTGT 374
| |||||||| |||| |||||||||||| |||||||||||||||| || | |||| |||
Sbjct 114 TAAATTCTGTTTGGAATGCATGAAACGATATATAGAAGTGAGGCTTCTAGAGGGAACTGT 173
Query 375 ACCGAGATGTCCTCATTATCAATGCAG-GTCTAAACTTACTCTTGGAAGCTG-TGTCAAT 432
|| || ||||||| |||||||||| | |||||| || |||||| ||| || | || ||
Sbjct 174 ACTGATATGTCCTTATTATCAATG-TGAGTCTAAGCTGACTCTTAAAAGTTGTTTTC-AT 231
Query 433 CTTTTGACATCTAAACTAAAAGCAATGTGGGAACGAATA-ATCGACGAGGAATCGATT-C 490
|||||||||||||||||||||| |||||||||| || | || || |||||||| ||| |
Sbjct 232 ATTTTGACATCTAAACTAAAAGCGATGTGGGAAC-AAAAGATTGAAGAGGAATCCATTCC 290
Query 491 ATGTGGCGGACAGAGTTTATTGTCCAAACCCGAGGTGCTCAGCCTTAATGTCGGTAACCA 550
| || |||| ||| ||||||| || |||||||||||||| || ||||||||| || |
Sbjct 291 A-GTAACGGAGAGATTTTATTGCCCGAACCCGAGGTGCTCGGCTTTAATGTCGAAAATCG 349
Query 551 AGCTCTCAAACTCAAACTCTA-CTAAAGAAGATGTAACTATGAGAAGCTGTTTCAAATGC 609
|||||| || ||| |||| || |||||||| | | || | || || ||| |||||
Sbjct 350 AGCTCT----CT-AAA-TCTACCT-TAGAAGATG-GA-TTTGTG-AGATGCTTCCAATGC 399
Query 610 AGTGAACCCTTTTGTATCACCTGCAAAGTTCCGTGGCATAGCAACTTGTCGTGCAACGAT 669
| || | |||||| || | |||||||||| | ||||| || |||||||| || || ||
Sbjct 400 GGGGAGCGCTTTTGCATTAACTGCAAAGTTTCATGGCAAAGTAACTTGTCATGTGACAAT 459
Query 670 TACAAGAGATTGGGTCCA-AATCCTACAGCAGATGATATA-AAGATGAAAGCTCTAGCAT 727
| ||||| ||||||| | ||||||||| ||||||||| | | | | |||| ||| |||
Sbjct 460 TGCAAGAAATTGGGT-AATAATCCTACATCAGATGATA-AGATGCTAAAAGTTCTTGCAA 517
Query 728 ATAAGAAAATGTGGCGTCAATGTGAAAATTGTCAACACATAATCGAACTTTCGGAAGGAT 787
|| |||||| |||||| ||||||||||| || ||||| || ||| |||||||||||||||
Sbjct 518 ATGAGAAAAAGTGGCGCCAATGTGAAAAGTGCCAACATATGATCAAACTTTCGGAAGGAT 577
Query 788 GCATCCATGTAACTTGCAGGTAT 810
|||||||||||||||||| ||||
Sbjct 578 GCATCCATGTAACTTGCATGTAT 600
> AT3G45560.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:16719630-16722674 REVERSE LENGTH=1512
Length=1512
Score = 322 bits (174), Expect = 3e-87
Identities = 365/454 (80%), Gaps = 26/454 (6%)
Strand=Plus/Plus
Query 79 GAGCAAGAGAACATCGCTTTGCTAATGGATGATGTGCAACGCATTAGACAACGATTGACG 138
|||||||| ||||| |||||||| ||||||||||||||||| |||||| ||| ||| ||
Sbjct 289 GAGCAAGATAACATTGCTTTGCTTATGGATGATGTGCAACGTATTAGAAAACAATTTACT 348
Query 139 TCTAGCTTTCCTGTTCTGGTGACTAGGAATCAA-ATGAAATTTG-TGTATGAA-CTTGCA 195
|||||| | |||||| || ||||||| |||||| | || |||| | ||| || ||||||
Sbjct 349 TCTAGCATCCCTGTTTTGATGACTAGAAATCAAGCT-AAGTTTGCT-TAT-AAGCTTGCA 405
Query 196 ATGGAAACAATAGTTTCTGAAATCAGCATACATATA-C-C-TGATCAGAAGAAGACTTGC 252
||||||||||||||||||||||| |||||| |||| | | | ||||| ||||||||||
Sbjct 406 ATGGAAACAATAGTTTCTGAAATTAGCATAGATATGGCGCCTTCTCAGAGGAAGACTTGC 465
Query 253 AGTATTTGTTCCGATGATAACTTCGAACCTGAGCAGATGTTTTCTATTGATTTATGCGGT 312
|||| |||| | ||||| | ||| || ||||||| ||||||||| |||||||||| ||
Sbjct 466 GGTATCTGTTTCAATGATGATTTCAAAGCTGAGCATATGTTTTCTGTTGATTTATGTGGC 525
Query 313 CATGAATTCTGTGTGGAGTGCATGAAACGACATATAGAAGTGAGGCTACTCGCGGGAGGT 372
||| ||||||||||||||||||||| || | ||||| ||||||||||||||| || | ||
Sbjct 526 CATCAATTCTGTGTGGAGTGCATGACACAATATATAAAAGTGAGGCTACTCGAGGAAAGT 585
Query 373 GT-ACCGAGATGTCCTCATTATCAATGC-AGGTCTAAACTTA-CTCTTGGAAGCTGTGTC 429
| | |||||| ||||||||||||||| || || || ||| || ||| | | |||| |
Sbjct 586 GAGAT-GAGATGCCCTCATTATCAATGCGAG-TCCAAG-TTAACTGTTGTACGATGTGCC 642
Query 430 AATCTTTTGACATCTA-AACTAAAAGCA-ATGTGGGAACGAATA--ATCGACGAGGAATC 485
||||||||||| || |||||| || | |||||||||| | || | | | |||||||
Sbjct 643 AATCTTTTGAC-TCCGGAACTAAGAG-AGATGTGGGAAC-A-TAGGAGCCAAAAGGAATC 698
Query 486 -GATTCATGTGGCGGACAGAGTTTATTGTCCAAA 518
| || |||||| |||| || |||||| |||||
Sbjct 699 CG-TTGTTGTGGCAGACAAAGCTTATTG-CCAAA 730
> AT3G45540.1 | Symbols: | RING/U-box protein with C6HC-type zinc
finger | chr3:16706312-16707649 REVERSE LENGTH=1047
Length=1047
Score = 276 bits (149), Expect = 3e-73
Identities = 407/530 (77%), Gaps = 24/530 (5%)
Strand=Plus/Plus
Query 286 CAGATGTTTTCTATTGATTTA-TG-CGGTCAT-GAATTCTGTGTG-GAGTGCATGAAACG 341
|||||||||| | ||| | | || || |||| || || ||| | || || |||| |||
Sbjct 334 CAGATGTTTTGTGTTGGTA-AGTGTCG-TCATCGATTT-TGT-TCCGACTGTATGAGACG 389
Query 342 ACATATAGAAGTGAGGCTACTCGCGGGAGGTGTACCGAGATGTCCTCATTATCAATGCAG 401
||||||||| ||||||||||||| |||| ||||| ||||||||||||||| | ||||
Sbjct 390 ACATATAGAGGTGAGGCTACTCGAGGGAAGTGTAATGAGATGTCCTCATTACCGCTGCAA 449
Query 402 GTCTAAACTTAC-TCTTGGAAGCTGTGTCAATCTTTTGACATCTAAACTAAAAGCA-ATG 459
| ||| || | | ||||| ||||| | |||||||||||| ||||| ||| || | |||
Sbjct 450 GACTACGCTAAAAT-TTGGAGGCTGTATAAATCTTTTGACACCTAAAATAAGAG-AGATG 507
Query 460 TGGGAACGAATAATCGACGAGGAATCGATTCATGTGGC-GGACAGAGTTTATTGTCCAAA 518
||| ||| || || | || || | || | ||| | || ||| |||| || |||||
Sbjct 508 TGGCAACAAAGGATTAAAGAAGACTTAATCCCTGTAACAGGG-AGAATTTACTGCCCAAA 566
Query 519 CCCGAGGTGCTCAGCCTTAATGTCGGTAACCAAGCTCTCAAACTCAAACTCTACTAAAGA 578
| || | ||||| || |||||||| | |||| ||||||| | | | || ||||||||
Sbjct 567 CTCGCGATGCTCGGCTTTAATGTCAGAAACCGAGCTCTCTA--T-A---TCAACTAAAGA 620
Query 579 AGATGTAACT-ATGAGAAGCTGTTTCAAATGCAGTGAACCCTTTTGTATCACCTGCAAAG 637
||||| || | | |||| | || ||||||||| || || |||||| |||| || ||||
Sbjct 621 AGATG-AAGTTAGGAGATGTTGCTTCAAATGCGGTCAAATCTTTTGCATCAAGTGTAAAG 679
Query 638 TTCCGTGGCATAGCAACTTGTCGTGCAACGATTACAAGA-GATTGGGTCCAAATCCTACA 696
|| | |||||||| ||||||||||||||||||||||||| | ||| |||| | ||||||
Sbjct 680 TTTCATGGCATAGTAACTTGTCGTGCAACGATTACAAGAAG-TTGAATCCATACCCTACA 738
Query 697 GCAGATGATATAAAGATGAAAGCTCTAGCATATAAGAAAATGTGGCGTCAATGTGAAAAT 756
| | ||||| |||||| |||||||| ||| || |||||| |||||||||||| | |||
Sbjct 739 GAAAATGATGGAAAGATTAAAGCTCTGGCAAATCAGAAAAGGTGGCGTCAATGCGGAAAG 798
Query 757 TGTCAACACATAATCGAACTTTCGGAAGGATGCATCCATGTAACTTGCAG 806
||||||||||| || |||||||| |||||||| | || |||| |||||
Sbjct 799 TGTCAACACATGATTGAACTTTCTAAAGGATGCGTACAAGTAAAGTGCAG 848
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 39885912718
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5