BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg897382 Length=1182 Score E Sequences producing significant alignments: (Bits) Value AT3G45670.1 | Symbols: | Protein kinase superfamily protein | ... 1279 0.0 AT4G04632.1 | Symbols: | Protein kinase superfamily protein | ... 333 2e-90 > AT3G45670.1 | Symbols: | Protein kinase superfamily protein | chr3:16765320-16766459 FORWARD LENGTH=1140 Length=1140 Score = 1279 bits (692), Expect = 0.0 Identities = 993/1138 (87%), Gaps = 22/1138 (2%) Strand=Plus/Plus Query 53 AGATTTCTGATTCATCGTCAAGCAACAACTCCATGATCCCTCCTCTTCCTCAAAACCCTA 112 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 17 AGATTTCTGATTCATCGTCAAGCAACAACTCGATGATCCCTCCTCTTCCTCAAAACCCTA 76 Query 113 TTTTCACTGTAAAACTCTCTCCGATCATGCTCCATCTACGTCGTTGTTCGAGGAAGATTA 172 |||| ||||| ||||||||||||||||| |||||| |||| ||||| |||| ||| |||| Sbjct 77 TTTTGACTGTGAAACTCTCTCCGATCATTCTCCATGTACGACGTTGCTCGAAGAACATTA 136 Query 173 AAAAGAAGAAACTTACACAGCCGCTTTTgaagaagaagaagaagaagaagaGTATTAGTA 232 |||||||||||| ||||| | ||| ||| |||||||||||||||||||||||||| Sbjct 137 AAAAGAAGAAACGTACACGGACGCCTTT------GAAGAAGAAGAAGAAGAGTATTAGTA 190 Query 233 GCAGTGTCAAATTTCTAAGCAGAGGATCATTCAACGCCGCCGT-TCAGAAACGTTCCACC 291 |||||||| ||| | ||| | ||| |||||||| ||||| | |||||||| ||||||| Sbjct 191 GCAGTGTCGAATCTATAATCGGAGTCTCATTCAAATCCGCC-TCTCAGAAACATTCCACC 249 Query 292 ACCGTAACCCGCAACGGAGGAGTGAGAAAGGTTTCCTCTTGGGTGAAATCTAGGTTACTT 351 |||||||| ||| |||||||||| | |||| ||||||||||||||||||||||||||||| Sbjct 250 ACCGTAACTCGCGACGGAGGAGTTAAAAAGATTTCCTCTTGGGTGAAATCTAGGTTACTT 309 Query 352 GGGGAAGGGGGTTACGCTTCG-GTTTACCTAGCGACGAGTAAAGACGACAGATACAAAAC 410 || ||||||| ||||| || | |||||||||||||| |||||||| |||| ||||||||| Sbjct 310 GGAGAAGGGGCTTACGGTT-GTGTTTACCTAGCGACAAGTAAAGATGACATATACAAAAC 368 Query 411 AGAGAGAGCCATCAAAAGTGCAGA-GCTTTCAAAGGCTTCGAGTCTTATGCACGAAGGAA 469 ||||||||| ||||||||||| || | ||| |||||||| |||||||||||||||||||| Sbjct 369 AGAGAGAGCGATCAAAAGTGCTGATG-TTTTAAAGGCTTGGAGTCTTATGCACGAAGGAA 427 Query 470 GGATCCTAA-AACGTTTACAATCTCCGTTCGTGATTAGTTGCTACGGCGATGAGATTGCA 528 ||||| ||| || |||| |||||||||||||||||| |||| |||||| |||| |||||| Sbjct 428 GGATCTTAAGAA-GTTTGCAATCTCCGTTCGTGATTCGTTGTTACGGCCATGAAATTGCA 486 Query 529 CGAGAAGGGACTGGTCATGAATATAACTTAG-TTCTCGAGTATTG-TGCTGGACAGTGTC 586 |||||||||||||||||| ||||||| || | |||||||||| || | |||||||||||| Sbjct 487 CGAGAAGGGACTGGTCATCAATATAA-TTTGATTCTCGAGTACTGCT-CTGGACAGTGTC 544 Query 587 TTGTGGATTTGATCGAAGATAATCACGGAGGGTTGTCGGAGTTTGATGTGAAGCAGTTCT 646 ||| |||| |||||||||||||||| |||||| | ||||||||||||| ||||||||| Sbjct 545 TTGCGGATATGATCGAAGATAATCAAGGAGGGATACCGGAGTTTGATGTCAAGCAGTTCG 604 Query 647 CTAGAGATGTTCTGTCTGGTCTCAGTTACATTCACAGCAGAAACATTGTTCATTGTGACA 706 ||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct 605 CTATAGATGTTCTGTCTGGTCTCAGTTACATTCACCGCAGAAACATTATTCATTGTGAAA 664 Query 707 TTAAACCAGACAATCTCTTACTCAGCCCTGTTGATCACCGGTTTAGGTTTAATGGGTATC 766 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 665 TTAAACCGGACAATCTCTTACTCAGCCCTGTTGATCACCGGTTTAGGTCTAATGGGTTTT 724 Query 767 TGATTAAA-ATTGCAGATTTTGGTTTATCAATGGAGAAAGGTTCGGTGGAGTATGGGAAT 825 ||| ||| ||||||||||| ||||||||||||||||||||||| |||||||| || Sbjct 725 TGAC-AAAGATTGCAGATTTCGGTTTATCAATGGAGAAAGGTTCTAAAGAGTATGGAAAC 783 Query 826 GGATGTGGTCATATGAGAGGGACAACTAGGTACATGGCTCCGGAATTAATAGGCCATGGG 885 ||| |||| || |||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 784 GGACGTGGGCACATGAGAGGGACAACTAGGTACATGGCTCCGGAGTTAATAGGCGGTGGG 843 Query 886 GTTGTTGATTTTGGTGTTGACATTTGGGCGTTTGGATGTTCTGTTTTGGAGATGCTAACC 945 || | ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 844 CTTCTGGATTTTGCTGTTGACATTTGCGCGTTTGGATGTTCTGTTTTGGAGATGCTAACC 903 Query 946 GGGCAAATGGTTTGGGGAGAGCATGGTGATTTGGTTTTTGATGATTGGGTTAAGCTCATC 1005 ||| ||| |||||||||||| |||||||||||| | ||||||||||||| | | ||| Sbjct 904 GGGAAAAGGGTTTGGGGAGAATATGGTGATTTGGCTCATGATGATTGGGTTGATTTGATC 963 Query 1006 GGTCACACTGATCTCATTCCTCGTATATCGAGTCGGTTATCGGAAGAAGCTCAGGATTTT 1065 ||||||| |||||||| ||||| || |||| ||||||||| | ||||||||| || ||| Sbjct 964 GGTCACAGTGATCTCACTCCTCAAATCTCGATTCGGTTATCTGCAGAAGCTCAAGACTTT 1023 Query 1066 TTGAGGAGATGCTTTG-TTAAGGAGCCTGGTTCAAGATGGAGGATCAATGAACTCATGAA 1124 ||| ||| || |||| |||||||||||||||| || |||| ||| ||||||| || | Sbjct 1024 CTGATGAGGTG-TTTGGTTAAGGAGCCTGGTTCGAGGTGGACCATCGGTGAACTCGTGGA 1082 Query 1125 CCATCCGTTTCTCTATTCGGATGTGGATTTTTCTCATAACGGTTTTGTTTATGACTGA 1182 |||||||||||||| ||| |||| || |||||||| || || ||||||||||| ||| Sbjct 1083 CCATCCGTTTCTCTGTTCAGATGAAGAGTTTTCTCACAATGGATTTGTTTATGATTGA 1140 > AT4G04632.1 | Symbols: | Protein kinase superfamily protein | chr4:2339586-2340049 REVERSE LENGTH=464 Length=464 Score = 333 bits (180), Expect = 2e-90 Identities = 277/325 (85%), Gaps = 2/325 (1%) Strand=Plus/Plus Query 859 ATGGCTCCGGAATTAATAGGCCATGGGGTTGTTGATTTTGGTGTTGACATTTGGGCGTTT 918 ||||||||||| ||||||||| |||| |||| ||||||| ||||||||||||||||||| Sbjct 1 ATGGCTCCGGAGTTAATAGGCGGTGGGCTTGTGGATTTTGCTGTTGACATTTGGGCGTTT 60 Query 919 GGATGTTCTGTTTTGGAGATGCTAACCGGGCAAATGGTTTGGGGAGAGCATGGTGATTTG 978 |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| Sbjct 61 GGATGTTCTGTTTTGGAGATGCTAACAGGGAAAACGGTTTGGGGAGAGCATGGTGATTTG 120 Query 979 GTTTTTGATGATTGGGTTAAGCTCATCGGTCACACTGATCTCATTCCTCGTATATCGAGT 1038 ||| ||||||||||||| | | || ||||| | |||||||| ||||| || |||| | Sbjct 121 GTTCATGATGATTGGGTTGATTTAATTGGTCATAGTGATCTCACTCCTCAAATCTCGACT 180 Query 1039 CGGTTATCGGAAGAAGCTCAGGATTTTTTGAGGAGATGCTTTG-TTAAGGAGCCTGGTTC 1097 |||||||| | ||||||||| || ||| | | ||| || |||| |||||||||||||||| Sbjct 181 CGGTTATCTGCAGAAGCTCAAGACTTTCTAATGAGGTG-TTTGGTTAAGGAGCCTGGTTC 239 Query 1098 AAGATGGAGGATCAATGAACTCATGAACCATCCGTTTCTCTATTCGGATGTGGATTTTTC 1157 || ||||| ||| ||||||| || |||||| |||||| | ||||||||| || ||||| Sbjct 240 GAGGTGGAGCATCGGTGAACTCGTGGACCATCTGTTTCTTTGTTCGGATGTAGAGTTTTC 299 Query 1158 TCATAACGGTTTTGTTTATGACTGA 1182 ||| || |||||||||||||| ||| Sbjct 300 TCACAATGGTTTTGTTTATGATTGA 324 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58031830020 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5