BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg897427 Length=249 Score E Sequences producing significant alignments: (Bits) Value AT3G46160.1 | Symbols: | Protein kinase superfamily protein | ... 279 6e-75 AT2G18530.1 | Symbols: | Protein kinase superfamily protein | ... 252 1e-66 > AT3G46160.1 | Symbols: | Protein kinase superfamily protein | chr3:16950955-16952136 FORWARD LENGTH=1182 Length=1182 Score = 279 bits (151), Expect = 6e-75 Identities = 185/202 (92%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 34 GAGAAGGACGAGAAGAATCCTTTACTCGAGAAGATTTACTACAACACGTTACACGAGTAC 93 |||||||||| |||| |||| |||||||||||||| || |||||||||||||| |||||| Sbjct 388 GAGAAGGACGGGAAGGATCCATTACTCGAGAAGATGTATTACAACACGTTACAAGAGTAC 447 Query 94 TGTTCAGGAAGAAACCTAGCGAAACACATTGAAAGAAACAGAGGAAAATTACCGGAAGAT 153 | ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 448 AGCTCAGGAAGAAACCTAGCGACACACATTGAAAAAAACAGAGGAAAATTACCGGAAGAT 507 Query 154 GATGTGAAGAGTTTCGCTAGTGAGATATTGGTTGGTCTCAAGTATCTTCATGAAGAGAAG 213 ||||||| |||| |||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct 508 GATGTGAGGAGTCTCGCTAATGAGATATTGCTTGGTCTCAAGTATATTCATGAAGAGAAG 567 Query 214 ATCATTCACTGTGATATCAAAC 235 |||||||| ||||| ||||||| Sbjct 568 ATCATTCATTGTGACATCAAAC 589 > AT2G18530.1 | Symbols: | Protein kinase superfamily protein | chr2:8039670-8040780 FORWARD LENGTH=642 Length=642 Score = 252 bits (136), Expect = 1e-66 Identities = 154/163 (94%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 73 TACAACACGTTACACGAGTACTGTTCAGGAAGAAACCTAGCGAAACACATTGAAAGAAAC 132 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 76 TACAACACGTTACAAGAGTACTGTTCAGGAAGAAACCTAGCGAAACACATTGAAAGAAAC 135 Query 133 AGAGGAAAATTACCGGAAGATGATGTGAAGAGTTTCGCTAGTGAGATATTGGTTGGTCTC 192 |||||||||||||| |||||||||||| ||||||||||| |||||||||| |||||||| Sbjct 136 GGAGGAAAATTACCGAAAGATGATGTGAGGAGTTTCGCTAATGAGATATTGCTTGGTCTC 195 Query 193 AAGTATCTTCATGAAGAGAAGATCATTCACTGTGATATCAAAC 235 |||||| |||||||||||||||||||||| ||||| ||||||| Sbjct 196 AAGTATATTCATGAAGAGAAGATCATTCATTGTGACATCAAAC 238 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11310243525 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5