BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg897444
Length=1398
Score E
Sequences producing significant alignments: (Bits) Value
AT3G46270.1 | Symbols: | receptor protein kinase-related | chr... 1945 0.0
AT3G46260.1 | Symbols: | protein kinase-related | chr3:1699816... 1195 0.0
AT3G46280.1 | Symbols: | protein kinase-related | chr3:1700548... 1064 0.0
AT3G46250.1 | Symbols: | pseudogene, similar to leaf senescenc... 761 0.0
> AT3G46270.1 | Symbols: | receptor protein kinase-related | chr3:17000641-17004251
REVERSE LENGTH=1673
Length=1673
Score = 1945 bits (1053), Expect = 0.0
Identities = 1294/1408 (92%), Gaps = 26/1408 (2%)
Strand=Plus/Plus
Query 1 ATGGAGAGTCGCCATAGGCTTTTGTTGCTCGCATGTATATCAAATTTGGCTATTATTCAC 60
|||||||||| |||| || ||||||| ||||||| |||||||| |||||||||| |||||
Sbjct 15 ATGGAGAGTCCCCATGGGGTTTTGTTACTCGCATTTATATCAACTTTGGCTATTGTTCAC 74
Query 61 CTTGTTCAAGCTCAAGATCAAAATGGTATAAGCATTGACTGTGGAACAACGGGATCCTAC 120
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTGTTCAAGCTCAGGATCAAAAAGGTATAAGCATTGACTGTGGAACAACGGGATCCTAC 134
Query 121 GTGGACTCCAACAACGTAACATGGGTCGGAGATAATGGCTTT-GTCACCACCGGCGAATC 179
||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||
Sbjct 135 GTGGACTCCAACAACGTAACATGGGTCGGAGATAAGGG-TTTCGTCACCACCGGCGAATC 193
Query 180 CATTAATATTACGGACGTCACCACAAAGCCGATCAACACTCTCCGGTATTTTCCAACCGG 239
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 194 CATTAATATTACGGACGTCACCACAAAGCCGATCAATACTCTCCGGTATTTTCCAACCGG 253
Query 240 TCAAACAAACTGCTACACCAACATTCCGGCGACAAAAGACCAG-AAAACCCTTGTGAGGA 298
||||||||||||||||||||| ||||||| |||||||| | || |||||||| |||||||
Sbjct 254 TCAAACAAACTGCTACACCAATATTCCGGTGACAAAAGGC-AGGAAAACCCTCGTGAGGA 312
Query 299 CGAAGTTTTACTATGAGAACTATGACGACAAGTTCTCGCCGCCATCTTTTGACATAGTTT 358
|||||| ||||| |||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct 313 CGAAGTACTACTACGAGAACTACGATGACAAGTTCTCGCCGCCATCTTTCGACATAGTTT 372
Query 359 ATGACGGGAAACACCGTGATTCTATTGAAATTACTGAATCATTACTCAACGACGAGGACA 418
||||||||||||||||||||||| |||| |||||||| || |||||| ||||||||||||
Sbjct 373 ATGACGGGAAACACCGTGATTCTGTTGATATTACTGAGTCGTTACTCGACGACGAGGACA 432
Query 419 CATTCTATTTCTCTGAGGTGATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGCCTCC 478
|||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
Sbjct 433 CATTTTATTTCTCTGAGGTGATTTTTGCTCCGGCGAGTGAGAATATCAGCGTTTGCCTTC 492
Query 479 TCCGTACTTCTCCGTCCGATAACCCTTTTATATCTTCCATTGAAGTTTACAGCTTCGATG 538
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 493 TCCGTACGTCTCCGTCCGATAACCCTTTTATATCTTCCATTGAAGTTTACAGCTTCGATG 552
Query 539 CCGGCATGTACGAAGATGTTGGTCCTGAAGAAGGTCTCATTCTCTATGAAAGAATTACGT 598
|||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 553 ACGGCATGTACAAAGATCTTGGTCCTGAAGAAGGTCTCATTCTCTATCAAAGAATTACGT 612
Query 599 ACGGTGCCAAAAAGCTTATAAGCTACCCGTTAGATCCTTACGGTAGGCTATGGTCTCCGT 658
|||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 613 ACGGAGCCAAAAAGCTTATAAGCTATCCGTTAGATCCTTTCGGTAGGCTATGGTCTCCGT 672
Query 659 CAGGGTCCGAAGACAACACCGCACTGACCGATCTAACAACCTCAGCCCCATCGATAGACA 718
||| ||||| ||||||||||||||||||||||||| | |||||||||||||| |||||||
Sbjct 673 CAGCGTCCGGAGACAACACCGCACTGACCGATCTATCGACCTCAGCCCCATCTATAGACA 732
Query 719 TCACCGGGGCGTCAAACAAGCCGCCAGAGATTGTTATGTCGAAGGCATTGTCAGGAGATG 778
||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 733 TCACCGGGGCGTCTAACAAGCCGCCAGAGATTGTTATGTCCAAGGCATTGTCAGGAGACG 792
Query 779 GCTTAATCATCTCCGGCCTGCCTCTCCCCTCAACTGCTGTATTGGTATACTTGGCTCTTT 838
||||||||||||||| |||||||||||||||||||||| | ||||||| ||||||||||
Sbjct 793 GCTTAATCATCTCCGACCTGCCTCTCCCCTCAACTGCTACACTGGTATATTTGGCTCTTT 852
Query 839 ACTTCTCGGAGCCTCAGAGTCTAGGTCGGACCCAGAAACGATCGTTCAACATTTTCTTGG 898
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 853 ACTTCTCGGAGCCTCAGAGTCTAGGTCGGACCCAGAAACGATCGTTCAACGTTTTCTTGG 912
Query 899 ACAACATGCAAGTGGGTTCACATCCCATCGTACCGGTTTTTGGGAAAGCTACTCAACTCG 958
|| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 913 ACGACATGCAAGTGGGTTCACATCCCATCGTACCGGTTTTTGGGAAAGCGACTCAACTCG 972
Query 959 TTTTGAGAGATGTAGAGGCCACTTCGGAGTCCCAGATAGTCTTTAAGTCTACGGATGACT 1018
||||||||||||||||||||||||||| |||||| |||||||| |||||||| |||||||
Sbjct 973 TTTTGAGAGATGTAGAGGCCACTTCGGGGTCCCAAATAGTCTTAAAGTCTACTGATGACT 1032
Query 1019 CGGTTTTGCCAACCATCATCAATGGTTTGGAGCTATATTCAATAAGTAACAACCAGCACG 1078
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 1033 CGGTATTGCCGACCATGATCAATGGTTTGGAGCTATATTCCATAAGTAACAATCAGCACG 1092
Query 1079 GTGGAAGCGGAGGCCAAAGCggtggtggtggt---gg-gg-g-c------caaagcggtg 1126
||||||||||||| ||||||||||||||| | || || | | ||||||||||
Sbjct 1093 GTGGAAGCGGAGGAAAAAGCGGTGGTGGTGATAACGGTGGTGGCGGGGGGCAAAGCGGTG 1152
Query 1127 gtggtaataatggtgggAGCAAAGT-A---GGA--AA-GAAAAAGAACAACTTACCACTC 1179
|||||||||||||||||| |||| | | ||| || ||||||||||| ||||||||||
Sbjct 1153 GTGGTAATAATGGTGGGA-CAAATTTAAAAGGAGGAAAGAAAAAGAACAGCTTACCACTC 1211
Query 1180 ATTTTGGGAGTTACGTTCGCCTCCGTGTTCGTTGTTTTCTGGTCAGCGTTCGTGGTTAAT 1239
||| | || ||||| ||||||||||| ||||| || ||||||||||||| |||||||||
Sbjct 1212 ATTCTAGGCGTTACATTCGCCTCCGTATTCGTAATTCTCTGGTCAGCGTTTGTGGTTAAT 1271
Query 1240 ATTTTGAGAAAGCGTCAAAATGCGAAGCCAGAGTCCAACACAGCACCATCTACGTCCACA 1299
||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||
Sbjct 1272 ATTTTGAGAAAGCGTCAAAATGCGAAGCCAGTGTCCAACACAGCACCAACTACTTCCACA 1331
Query 1300 GAGCATGGAATAGGAACAGGAGA-GTCACCTCTATTTGGACAACAAACGGCCAGCGACAC 1358
|||| ||| ||||| ||||| || ||||||||||||||||||| ||| |||||| |||||
Sbjct 1332 GAGCGTGGGATAGGCACAGG-GACGTCACCTCTATTTGGACAAGAAATGGCCAGTGACAC 1390
Query 1359 GAATGATTCGTATGTTGTTCAAGATGAA 1386
|||||||||||| ||||||||| |||||
Sbjct 1391 GAATGATTCGTACGTTGTTCAAAATGAA 1418
> AT3G46260.1 | Symbols: | protein kinase-related | chr3:16998163-16999992
REVERSE LENGTH=1305
Length=1305
Score = 1195 bits (647), Expect = 0.0
Identities = 945/1089 (87%), Gaps = 20/1089 (2%)
Strand=Plus/Plus
Query 17 GGCTTTTGTTGCTCGCATGTATATCAAATTTGGCTATTA-TTCACCTTGTT-CA-A--GC 71
|||| ||||||||||||| | |||||| ||||| || | |||||| || || |
Sbjct 11 GGCTCTTGTTGCTCGCATTTCTATCAACTTTGGTTA-CAGTTCACC-AATTCCACATTAT 68
Query 72 TCAAGATCAA-AATGGTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCA 130
||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 69 TCAAGCTCAAGAA-GGTATAAGCATTGACTGTGGAACAACGGGTTCCTACGTGGACTCCA 127
Query 131 ACAACGTAACATGGGTCGGAGATAATGGCTTTGTCACCACCGGCGAATCCATTAATATTA 190
|||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||||| |
Sbjct 128 ACAATGTAACATGGGTCGGAGATAAAGGCTTCGTCACCACCGGCGAGTCCATTAATATCA 187
Query 191 CGGACGTCACCACAAAGCCGATCAACACTCTCCGGTATTTTCCAACCGGTCAAACAAACT 250
|||||||| || ||| |||||||| || |||||||| |||||||| ||||||||||| |
Sbjct 188 CGGACGTCGTCAAAAAACCGATCAATACCCTCCGGTACTTTCCAACAGGTCAAACAAATT 247
Query 251 GCTACACCAACATTCCGGCGACAAAAGACCAGAAAACCCTTGTGAGGACGAAGTTTTACT 310
|||||||||||||||| |||||||||| || || ||||| ||||||||||| |||||||
Sbjct 248 GCTACACCAACATTCCAGCGACAAAAGGCCGGACCACCCTCGTGAGGACGAAATTTTACT 307
Query 311 ATGAGAACTATGACGACAAGTT-CTCGCCGCCATCTTTTGACATAGTTTATGACGGGAAA 369
| | ||||||||||| || || |||||| |||||||| ||| | ||||| || ||||||
Sbjct 308 ACAAAAACTATGACGAGAA-TTACTCGCCACCATCTTTCGACGTGGTTTACGATGGGAAA 366
Query 370 CACCGTGATTCTATTGAAATTAC---TGAATCATTACTCAACGACGAGGACACATTCTAT 426
|||||| ||||||||| || || ||| || || ||| ||||||||| |||||| ||
Sbjct 367 CACCGTAATTCTATTGCTATGACAGTTGACTCGTTGTTCAGCGACGAGGAAACATTCCAT 426
Query 427 TTCTCTGAGGTGATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGCCTCCTCCGTACT 486
| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 427 TACTCTGAGGTGATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGCCTCGTCCGTACG 486
Query 487 TCTCCGTCCGATAACCCTTTTATATCTTCCATTGAAGTTTACAGCTTCGATGCCGGCATG 546
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 487 TCTCCGTCCGATAACCCTTTTATATCTTCCATTGAAGTTTACCGCTTCGATGCCGGCATG 546
Query 547 TACGAAGATGTTGGTCCTGAAGAAGGTCTCATTCTCTATGAAAGAATTACGTACGGTGCC 606
|| || ||| ||||||||||||||||| ||||||||||| |||||| | |||||||||||
Sbjct 547 TATGACGATCTTGGTCCTGAAGAAGGTTTCATTCTCTATAAAAGAAATGCGTACGGTGCC 606
Query 607 AAAAAGCTTATAAGCTACCCGTTAGATCCTTACGGTAGGCTATGGTCTCCGTCAGGGTCC 666
| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 607 ACAAAGCTTATAAGCTACCCGTTAGATCCTTACGGTAGGCTATGGTCCCCAAAAGGGTCC 666
Query 667 GAAGACAA-CACCGCACTGACCGATCTAACAACCTCAGCCCCATCGATAGACATCACCGG 725
||||| | | ||| ||||| |||||| ||||||||||||||||| ||||| ||||||||
Sbjct 667 CAAGACTATC-CCGGACTGATCGATCTTACAACCTCAGCCCCATCCATAGATATCACCGG 725
Query 726 GGCGTCAAACAAGCCGCCAGAGATTGTTATGTCGAAGGCATTGTCAGGAGATGGCTTAAT 785
|||| ||||| |||||||||||||||||| |||||||| |||||||||| ||||| ||
Sbjct 726 AGCGTTGAACAAACCGCCAGAGATTGTTATGACGAAGGCAATGTCAGGAGACGGCTTTAT 785
Query 786 CATCTCCGGCCTGCCTCTCCCCTCAACTGCTG-TATTGGTATACTTGGCTCTTTACTTCT 844
|| ||||||||| ||||||||| || || || ||||||||| ||||||||||| |
Sbjct 786 AATGTCCGGCCTGAATCTCCCCTCTACC-CTTCTACCGGTATACTTAGCTCTTTACTTTT 844
Query 845 CGGAGCCTCAGAGTCTAGGTCGGACCCAGAAACGATCGTTCAACATTTTCTTGGACAACA 904
| |||||||||||||||||||||||||| ||||||||||||| | ||||||||||| ||
Sbjct 845 CAGAGCCTCAGAGTCTAGGTCGGACCCAAAAACGATCGTTCACCGTTTTCTTGGACGGCA 904
Query 905 TGCAAGTGGGTTCACATCCCATCGTACCGGTTTTTGGGAAAGCTACTCAACTCGTTTTGA 964
|||||||||||||||||||||| ||||| |||||||||||||| |||||| ||||||| |
Sbjct 905 TGCAAGTGGGTTCACATCCCATAGTACCAGTTTTTGGGAAAGCGACTCAAGTCGTTTTAA 964
Query 965 GAGATGTAGA-GGCCACTTCGGAGTCCCAGATAGTCTTTAAGTCTACGGATGACTCGGTT 1023
||||| || | ||||| ||||||||||||| |||| |||||||| || |||||||||| |
Sbjct 965 GAGATATA-ATGGCCAGTTCGGAGTCCCAGTTAGTTTTTAAGTCAACCGATGACTCGGGT 1023
Query 1024 TTGCCAACCATCATCAATGGTTTGGAGCTATATTCAATAAGTAACAACCAGCACGGTGGA 1083
||||| |||||||||| |||||||||| | ||||| ||||||||| || || || ||||
Sbjct 1024 TTGCCGACCATCATCAGTGGTTTGGAGGTCTATTCGATAAGTAACTACAAGGACCATGGA 1083
Query 1084 AGCGGAGGC 1092
|||||||||
Sbjct 1084 AGCGGAGGC 1092
> AT3G46280.1 | Symbols: | protein kinase-related | chr3:17005483-17008424
REVERSE LENGTH=1619
Length=1619
Score = 1064 bits (576), Expect = 0.0
Identities = 860/997 (86%), Gaps = 20/997 (2%)
Strand=Plus/Plus
Query 86 GTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCAACAACGTAACATGGG 145
|||||||||| ||||||||| |||| ||||| ||||||||||||||||| ||||||||||
Sbjct 85 GTATAAGCATCGACTGTGGATCAACCGGATCTTACGTGGACTCCAACAATGTAACATGGG 144
Query 146 TCGGAGATAATGGCTTTGTCACCACCGGCGAATCCATTAATATTACGGACGTCACCACAA 205
|||||||||| ||||| ||||||| |||||| |||| || ||| ||||||| || ||
Sbjct 145 TCGGAGATAAAGGCTTCGTCACCAACGGCGAGCCCATGAAGATTCCGGACGTTGTCAAAA 204
Query 206 AGCCGATCAACACTCTCCGGTATTTTCCAACCGGTCAAACAAACTGCTACACCAACATTC 265
|||| ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||
Sbjct 205 AGCCAATCAACACTCTCCGGTACTTCCCAACTGGTCAAACCAACTGCTACACCAACATTC 264
Query 266 CGGCGACAAAAGACCAGAAAACCCTTGTGAGGACGAAGTTTTACTATGAGAACTATGACG 325
||| |||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 265 CGGTGACAAAAGGCCAGAAAACCCTCGTGAGGACGAAGTTTTACTATGAGAACTACGACG 324
Query 326 AC-AAGTTCTCGCCGCCATCTTTTGACAT-AGTTTATGACGGGAAACACCGTGATTCTAT 383
| ||||||||||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct 325 -CGAAGTTCTCGCCGCCATCTTTTGATGTGA-TTTATGACGGGAAACACCGTGATTCTAT 382
Query 384 TGAAATTACTGAATCATTACTCAACGACGAGGACACATTCTATTTCTCTGAGGTGATATT 443
|| |||||| || || || || || || || || || ||||||||||| ||||||||||
Sbjct 383 TGTAATTACCGAGTCGTTGCTAAATGATGAAGAAACGTTCTATTTCTCGGAGGTGATATA 442
Query 444 TGCTCCGGCGAATGAGAATATCAGCGTTTGCCTCCTCCGTACTTCTCCGTCCGATAACCC 503
|| ||||| |||| ||||||||||||| || ||| | ||||| ||||||||||| |||||
Sbjct 443 TGTTCCGGAGAATAAGAATATCAGCGTCTGTCTCTTACGTACGTCTCCGTCCGACAACCC 502
Query 504 TTTTATATCTTCCATTGAAGTTTACAGCTTCGATGCCGGCATGTACGAAGATGTTGGTCC 563
|||||||| |||||||||||||| || || || | ||||||||||| ||| |||||||
Sbjct 503 ATTTATATCGTCCATTGAAGTTTATAGTTTGGACACTGGCATGTACGACGATCTTGGTCC 562
Query 564 TGAA-GAAGGTCTCATTCTCTATGAAAGAATTACGTACGGTGCCAAAAAGCTTATAAGCT 622
| || ||||||||||||||| | || |||||| | |||||||||||| ||||||||||||
Sbjct 563 T-AACGAAGGTCTCATTCTCCACGACAGAATTGCATACGGTGCCAAAGAGCTTATAAGCT 621
Query 623 ACCCGTTAGATCCTTACGGTAGGCTATGGTCTC-CGTCAGGGTCCGAAGACAACACCGCA 681
|||||||||| || ||||||||| |||||| | ||| ||| ||| ||||| ||| |
Sbjct 622 ACCCGTTAGACCCCTACGGTAGGGTATGGT-TAGCGTTAGGATCCCAAGACTCCAC---A 677
Query 682 CTGACCGATCTAACAACCTCAGCCCCATCGATAGACATCACCGGGGCGTCAAACAAGCCG 741
|||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 678 CTGACCGATCTAACGACCTCAGCCCCATCAATAGACATCACCGGGGCGTCGAACAAGCCA 737
Query 742 CCAGAGATTGTTATGTCGAAGGCATTGTCAGGAGAT-GGCTTAAT-CATCTCCGGCCTGC 799
||||||||||||||||| |||||||| ||||||| | |||||| | | |||| | || |
Sbjct 738 CCAGAGATTGTTATGTCAAAGGCATTATCAGGAG-TCGGCTTAGTAC-TCTCAGACCAGA 795
Query 800 CTCT-CCCCTCAACTGCTGTATTGGTATACTTGGCTCTTTACTTCTCGGAGCCTCAGAGT 858
|||| ||||| ||| | ||| |||||||||| |||||||||||| |||||||| |||
Sbjct 796 CTCTACCCCT-AACCGGAGTACCAGTATACTTGGTTCTTTACTTCTCAGAGCCTCAAAGT 854
Query 859 CTAGGTCGGACCCAGAAACGATCGTTCAACATTTTCTTGGACAACA-TGCAAGTGGGTTC 917
|||||||| ||||||| ||||||||||||| ||||||||||||||| | |||||||||||
Sbjct 855 CTAGGTCGAACCCAGAGACGATCGTTCAACGTTTTCTTGGACAACACT-CAAGTGGGTTC 913
Query 918 ACATCCCATCGTACCGGTTTTTGGGAAAGCTACTCAACTCGTTTTGAGAGATGTAGAGGC 977
| ||||||||||||||||||||||||||| |||||| || ||||||||||||||| |||
Sbjct 914 GCGTCCCATCGTACCGGTTTTTGGGAAAGCAACTCAATTCATTTTGAGAGATGTAGTGGC 973
Query 978 CACTTCGGAGTCCCAGATAGTCTTTAAGTCTACGGATGACTCGGTTTTGCCAACCATCAT 1037
||| |||| |||||||||||||||| |||| ||||||||||| ||||||||| || ||||
Sbjct 974 CACATCGGCGTCCCAGATAGTCTTTCAGTCAACGGATGACTCCGTTTTGCCACCCCTCAT 1033
Query 1038 CAATGGTTTGGAGCTATATTCAATAAGTAACAACCAG 1074
||| || |||||||| || || |||||||| | ||||
Sbjct 1034 CAACGGATTGGAGCTGTACTCGATAAGTAATA-CCAG 1069
> AT3G46250.1 | Symbols: | pseudogene, similar to leaf senescence-associated
receptor-like protein kinase, serine/threonine-specific
receptor protein kinase, Arabidopsis thaliana, PIR:S71277;
blastp match of 31% identity and 2.8e-15 P-value to
GP|9837280|gb|AAG00510.1||AF285172 leaf senescence-associated
receptor-like protein kinase {Phaseolus vulgaris} | chr3:16990102-16992407
REVERSE LENGTH=2306
Length=2306
Score = 761 bits (412), Expect = 0.0
Identities = 464/490 (95%), Gaps = 0/490 (0%)
Strand=Plus/Plus
Query 619 AGCTACCCGTTAGATCCTTACGGTAGGCTATGGTCTCCGTCAGGGTCCGAAGACAACACC 678
||||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||
Sbjct 841 AGCTATCCGTTAGATCCTTTCGGTAGGCTATGGTCTCCGTCAGCGTCCGGAGACAACACC 900
Query 679 GCACTGACCGATCTAACAACCTCAGCCCCATCGATAGACATCACCGGGGCGTCAAACAAG 738
||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||
Sbjct 901 GCACTGACCGATCTATCGACCTCAGCCCCATCTATAGACATCACCGGGGCGTCTAACAAG 960
Query 739 CCGCCAGAGATTGTTATGTCGAAGGCATTGTCAGGAGATGGCTTAATCATCTCCGGCCTG 798
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||
Sbjct 961 CCGCCAGAGATTGTTATGTCCAAGGCATTGTCAGGAGACGGCTTAATCATCTCCGACCTG 1020
Query 799 CCTCTCCCCTCAACTGCTGTATTGGTATACTTGGCTCTTTACTTCTCGGAGCCTCAGAGT 858
|||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||
Sbjct 1021 CCTCTCCCCTCAACTGCTACACTGGTATATTTGGCTCTTTACTTCTCGGAGCCTCAGAGT 1080
Query 859 CTAGGTCGGACCCAGAAACGATCGTTCAACATTTTCTTGGACAACATGCAAGTGGGTTCA 918
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1081 CTAGGTCGGACCCAGAAACGATCGTTCAACGTTTTCTTGGACGACATGCAAGTGGGTTCA 1140
Query 919 CATCCCATCGTACCGGTTTTTGGGAAAGCTACTCAACTCGTTTTGAGAGATGTAGAGGCC 978
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1141 CATCCCATCGTACCGGTTTTTGGGAAAGCGACTCAACTCGTTTTGAGAGATGTAGAGGCC 1200
Query 979 ACTTCGGAGTCCCAGATAGTCTTTAAGTCTACGGATGACTCGGTTTTGCCAACCATCATC 1038
||||||| |||||| |||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct 1201 ACTTCGGGGTCCCAAATAGTCTTAAAGTCTACTGATGACTCGGTTTTGCCAACCATGATC 1260
Query 1039 AATGGTTTGGAGCTATATTCAATAAGTAACAACCAGCACGGTGGAAGCGGAGGCCAAAGC 1098
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1261 AATGGTTTGGAGCTATATTCCATAAGTAACAACCAGCACGGTGGAAGCGGAGGAAAAAGC 1320
Query 1099 ggtggtggtg 1108
||||||||||
Sbjct 1321 GGTGGTGGTG 1330
Score = 754 bits (408), Expect = 0.0
Identities = 499/542 (92%), Gaps = 9/542 (2%)
Strand=Plus/Plus
Query 86 GTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCAACAACGTAACATGGG 145
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1 GTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCAATAACGTAACATGGG 60
Query 146 TCGGAGATAATGGCTTTGTCACCACCGGCGAATCCATTAATATTACGGACGTCACCACAA 205
|||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 61 TCGGAGATAATGGCTTCGTCACAACCGGCGAGTCCATTAATATTACGGACGTCACCACAA 120
Query 206 AGCCGATCAACACTCTCCGGTATTTTCCAACCGGTCAAACAAACTGCTACACCAACATTC 265
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 121 AGCCGATCAATACTCTCCGGTACTTTCCAACCGGTCAAACAAACTGCTACACCAACATTC 180
Query 266 CGGCGACAAAAGACCA-GAAAACCCTTGTGAGGACGAAGTTTTACTATGAGAACTATGAC 324
||| ||||||| || ||||||||| ||||||||||||| ||||| |||||||| ||
Sbjct 181 CGGTGACAAAA-TGCAGGAAAACCCTCGTGAGGACGAAGTACTACTACGAGAACTACGAT 239
Query 325 GAC-AAGTT--C-TCG--CCGCCATCTTTTGACATAGTTTATGACGGGAAACACCGTGAT 378
||| ||||| | | | || ||||||| ||||||||||||||||||||||||||||||
Sbjct 240 GACAAAGTTGACATAGTTTCGACATCTTTCGACATAGTTTATGACGGGAAACACCGTGAT 299
Query 379 TCTATTGAAATTACTGAATCATTACTCAACGACGAGGACACATTCTATTTCTCTGAGGTG 438
||| |||| |||||||| || |||||| |||||||||||||||| |||||||||||||||
Sbjct 300 TCTGTTGATATTACTGAGTCGTTACTCGACGACGAGGACACATTTTATTTCTCTGAGGTG 359
Query 439 ATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGCCTCCTCCGTACTTCTCCGTCCGAT 498
|| ||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 360 ATTTTTGCTCCGGCGAGTGAGAATATCAGCGTTTGCCTTCTCCGTACGTCTCCGTCCGAT 419
Query 499 AACCCTTTTATATCTTCCATTGAAGTTTACAGCTTCGATGCCGGCATGTACGAAGATGTT 558
|||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| ||
Sbjct 420 AACCCTTT-ATATCTTCCATTGAAGTTTACAGCTTCGATGACGGCATGTACAAAGATCTT 478
Query 559 GGTCCTGAAGAAGGTCTCATTCTCTATGAAAGAATTACGTACGGTGCCAAAAAGCTTATA 618
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 479 GGTCCTGAAGAAGGTCTCATTCTCTATCAAAGAATTACGTACGGAGCCAAAAAGCTTATA 538
Query 619 AG 620
||
Sbjct 539 AG 540
Score = 202 bits (109), Expect = 8e-51
Identities = 139/154 (90%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 1147 AAAGTAGGAAAGAAAAAGAACAACTTACCACTCATTTTGGGAGTTACGTTCGCCTCCGTG 1206
|||| |||||||||||||| || ||||||||||||| | || ||||| |||||||||||
Sbjct 1955 AAAGGAGGAAAGAAAAAGAGCAGCTTACCACTCATTCTAGGCGTTACATTCGCCTCCGTA 2014
Query 1207 TTCGTTGTTTTCTGGTCAGCGTTCGTGGTTAATATTTTGAGAAAGCGTCAAAATGCGAAG 1266
||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2015 TTCGTACTTCTCTGGTCAGCGTTTGTGGTTAATATTTTGAGAAAGCGTCAAAATGCGAAG 2074
Query 1267 CCAGAGTCCAACACAGCACCATCTACGTCCACAG 1300
|||| |||||||||||||||| |||| |||||||
Sbjct 2075 CCAGTGTCCAACACAGCACCAACTACTTCCACAG 2108
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68875147740
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5