BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg897445
Length=1152
Score E
Sequences producing significant alignments: (Bits) Value
AT3G46260.1 | Symbols: | protein kinase-related | chr3:1699816... 1884 0.0
AT3G46270.1 | Symbols: | receptor protein kinase-related | chr... 1105 0.0
AT3G46280.1 | Symbols: | protein kinase-related | chr3:1700548... 852 0.0
AT3G46250.1 | Symbols: | pseudogene, similar to leaf senescenc... 580 7e-165
> AT3G46260.1 | Symbols: | protein kinase-related | chr3:16998163-16999992
REVERSE LENGTH=1305
Length=1305
Score = 1884 bits (1020), Expect = 0.0
Identities = 1109/1152 (96%), Gaps = 5/1152 (0%)
Strand=Plus/Plus
Query 1 ATGGAGAGTGGGATCTTGTTGCTCGCATTTATATCAACTTTGGTTATAGTTCACCAATTC 60
|||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 1 ATGGAGAGTGGGCTCTTGTTGCTCGCATTTCTATCAACTTTGGTTACAGTTCACCAATTC 60
Query 61 CACATTATTCAAGCTCAAGAAGGTATAAGCATTGACTGTGGAACAACGGGTTCCTACGTG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CACATTATTCAAGCTCAAGAAGGTATAAGCATTGACTGTGGAACAACGGGTTCCTACGTG 120
Query 121 GACTCCAACAATGTAACATGGGTCGGAGATAATGGCTTCGTTACCACCGGCGAATCCATT 180
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct 121 GACTCCAACAATGTAACATGGGTCGGAGATAAAGGCTTCGTCACCACCGGCGAGTCCATT 180
Query 181 AATATCACGGACGTCGT-AAATAAACCGATCAATACCCTCCGGTACTTTCCAACCGGTCA 239
||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||
Sbjct 181 AATATCACGGACGTCGTCAAA-AAACCGATCAATACCCTCCGGTACTTTCCAACAGGTCA 239
Query 240 AACTAATTGCTACACCAACATTCCGGCGACAAAAGGCCGGAACACCCTTGTGAGGACGAA 299
||| |||||||||||||||||||| |||||||||||||||| |||||| |||||||||||
Sbjct 240 AACAAATTGCTACACCAACATTCCAGCGACAAAAGGCCGGACCACCCTCGTGAGGACGAA 299
Query 300 ATTTTACTACAAAAACTACGACGAGAATTACTCGCCACCATCTTTCGACGTGGTTTACGA 359
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 300 ATTTTACTACAAAAACTATGACGAGAATTACTCGCCACCATCTTTCGACGTGGTTTACGA 359
Query 360 TGGGAAACACCGTGATTCTATTGCGATTACAGCTGACTCGTTGTTCAGCGACGAGGAATC 419
||||||||||||| |||||||||| || |||| ||||||||||||||||||||||||| |
Sbjct 360 TGGGAAACACCGTAATTCTATTGCTATGACAGTTGACTCGTTGTTCAGCGACGAGGAAAC 419
Query 420 ATTCCATTACTCTGAGGTGATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGCCTCAC 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 ATTCCATTACTCTGAGGTGATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGCCTCGT 479
Query 480 CCGTACGTCTCCGTCCGATAACCCTTTTATATCTTCCATTGAAGTTTACCACTTCGATGC 539
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 480 CCGTACGTCTCCGTCCGATAACCCTTTTATATCTTCCATTGAAGTTTACCGCTTCGATGC 539
Query 540 CGGCATGTATGACGATCTTGGTCCTGAAGAAGGTCTCATTCTCTATAAAAGAAATGCGTA 599
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 540 CGGCATGTATGACGATCTTGGTCCTGAAGAAGGTTTCATTCTCTATAAAAGAAATGCGTA 599
Query 600 CGGTGCCACAAAGCTTATAAGCTACCCGTTAGATCCTTACAGTAGGCTATGGTTCCCAAA 659
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 600 CGGTGCCACAAAGCTTATAAGCTACCCGTTAGATCCTTACGGTAGGCTATGGTCCCCAAA 659
Query 660 AGGGTCCCAAGACTACCCCGGACTGATCGATCTTACAACCTCAGCAACATCCATAGACAT 719
||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 660 AGGGTCCCAAGACTATCCCGGACTGATCGATCTTACAACCTCAGCCCCATCCATAGATAT 719
Query 720 CACCGGAGCGTTGAACAAACCGCCAGAGATTGTTATGACGAAGGCAATGTCAGGAGACGG 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 CACCGGAGCGTTGAACAAACCGCCAGAGATTGTTATGACGAAGGCAATGTCAGGAGACGG 779
Query 780 CTTTACAATGTCCGGCCTGAATCTCCCCTCTAGTACCCCTCTACCGGTATACTTAGCTCT 839
||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 780 CTTTATAATGTCCGGCCTGAATCTCCCCTCTA---CCCTTCTACCGGTATACTTAGCTCT 836
Query 840 TTACTTCTCAGAGCCTCAGAGTCTAGGTCGGACCCAAAAACAATCGTTCACCGTTTTCTT 899
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 837 TTACTTTTCAGAGCCTCAGAGTCTAGGTCGGACCCAAAAACGATCGTTCACCGTTTTCTT 896
Query 900 GGACGGCATGCAAGTGGGTTCACATCCCATAGTACCAGTTTTTGGGAAAGCGACTCAAGT 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 GGACGGCATGCAAGTGGGTTCACATCCCATAGTACCAGTTTTTGGGAAAGCGACTCAAGT 956
Query 960 CGTTTTAAGAGATGTAATGGCTAGTTCGGAGTCCCAGTTAGTTTTTAAGTCAACCGATGA 1019
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 957 CGTTTTAAGAGATATAATGGCCAGTTCGGAGTCCCAGTTAGTTTTTAAGTCAACCGATGA 1016
Query 1020 CTCGGGTTTGCCGACCATCATCAGTGGTTTGGAGGTTTATTCGATAAGTAACTACAAGGA 1079
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1017 CTCGGGTTTGCCGACCATCATCAGTGGTTTGGAGGTCTATTCGATAAGTAACTACAAGGA 1076
Query 1080 CCGTGGAAGCGGAGGCGGGGGCCAAAGCGGCAGTAGTAATAATGGTCAGTTTTTATTGGA 1139
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 1077 CCATGGAAGCGGAGGCGGGGGCCAAAGCGGCAGTAGTAATAATGGTAAGTTTTTATTGAA 1136
Query 1140 CCTATGTATATG 1151
|||||||| |||
Sbjct 1137 CCTATGTAAATG 1148
> AT3G46270.1 | Symbols: | receptor protein kinase-related | chr3:17000641-17004251
REVERSE LENGTH=1673
Length=1673
Score = 1105 bits (598), Expect = 0.0
Identities = 941/1102 (85%), Gaps = 41/1102 (4%)
Strand=Plus/Plus
Query 9 TGGGATCTTGTTGCTCGCATTTATATCAACTTTGGTTATAGTTCACCAATTCCACATTA- 67
|||| | ||||| |||||||||||||||||||||| ||| ||||||| || || |
Sbjct 29 TGGGGTTTTGTTACTCGCATTTATATCAACTTTGGCTATTGTTCACC--TTGTTCA--AG 84
Query 68 TTCAAGCTCAAGAAGGTATAAGCATTGACTGTGGAACAACGGGTTCCTACGTGGACTCCA 127
||| | |||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 85 CTCAGGATCAAAAAGGTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCA 144
Query 128 ACAATGTAACATGGGTCGGAGATAATGGCTTCGTTACCACCGGCGAATCCATTAATATCA 187
|||| |||||||||||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct 145 ACAACGTAACATGGGTCGGAGATAAGGGTTTCGTCACCACCGGCGAATCCATTAATATTA 204
Query 188 CGGACGTCGTA-AATAAA-CCGATCAATACCCTCCGGTACTTTCCAACCGGTCAAACTAA 245
|||||||| | | ||| ||||||||||| |||||||| ||||||||||||||||| ||
Sbjct 205 CGGACGTC--ACCACAAAGCCGATCAATACTCTCCGGTATTTTCCAACCGGTCAAACAAA 262
Query 246 TTGCTACACCAACATTCCGGCGACAAAAGGCCGGAACACCCTTGTGAGGACGAAATTTTA 305
||||||||||| ||||||| |||||||||| |||| ||||| ||||||||||| | ||
Sbjct 263 CTGCTACACCAATATTCCGGTGACAAAAGGCAGGAAAACCCTCGTGAGGACGAAGTACTA 322
Query 306 CTACAAAAACTACGACGAGAA-TTACTCGCCACCATCTTTCGACGTGGTTTACGATGGGA 364
|||| | |||||||| || || || |||||| |||||||||||| | ||||| || ||||
Sbjct 323 CTACGAGAACTACGATGACAAGTT-CTCGCCGCCATCTTTCGACATAGTTTATGACGGGA 381
Query 365 AACACCGTGATTCTATTGCGATTACAGCTGACTCGTTGTTCAG-CGACGAGGA-ATCATT 422
|||||||||||||| ||| ||| | |||| ||||| || | ||||||||| | ||||
Sbjct 382 AACACCGTGATTCTGTTGATATT--A-CTGAGTCGTTACTC-GACGACGAGGACA-CATT 436
Query 423 CCATTACTCTGAGGTGATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGCC-TCACCC 481
||| |||||||||||| ||||||||||||| |||||||||||||||||||| || ||
Sbjct 437 TTATTTCTCTGAGGTGATTTTTGCTCCGGCGAGTGAGAATATCAGCGTTTGCCTTC-TCC 495
Query 482 GTACGTCTCCGTCCGATAACCCTTTTATATCTTCCATTGAAGTTTACCA-CTTCGATGCC 540
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
Sbjct 496 GTACGTCTCCGTCCGATAACCCTTTTATATCTTCCATTGAAGTTTAC-AGCTTCGATGAC 554
Query 541 GGCATGTATGACGATCTTGGTCCTGAAGAAGGTCTCATTCTCTATAAAAGAAATGCGTAC 600
|||||||| | ||||||||||||||||||||||||||||||||| |||||| | |||||
Sbjct 555 GGCATGTACAAAGATCTTGGTCCTGAAGAAGGTCTCATTCTCTATCAAAGAATTACGTAC 614
Query 601 GGTGCCACAAAGCTTATAAGCTACCCGTTAGATCCTTACAGTAGGCTATGGT-TCCCAAA 659
|| |||| ||||||||||||||| ||||||||||||| | |||||||||||| ||| |
Sbjct 615 GGAGCCAAAAAGCTTATAAGCTATCCGTTAGATCCTTTCGGTAGGCTATGGTCTCCGTCA 674
Query 660 AGGGTCCCAAGACTACCCCGGACTGATCGATCT-TACAACCTCAGCAACATCCATAGACA 718
| |||| |||| || ||| ||||| |||||| | | |||||||| |||| |||||||
Sbjct 675 -GCGTCCGGAGACAACACCGCACTGACCGATCTAT-CGACCTCAGCCCCATCTATAGACA 732
Query 719 TCACCGGAGCGT-TGAACAAACCGCCAGAGATTGTTATGACGAAGGCAATGTCAGGAGAC 777
||||||| |||| | ||||| |||||||||||||||||| | |||||| |||||||||||
Sbjct 733 TCACCGGGGCGTCT-AACAAGCCGCCAGAGATTGTTATGTCCAAGGCATTGTCAGGAGAC 791
Query 778 GGCTTTA-CAATGTCCGGCCTGAATCTCCCCTCTAGTACCCCT-CTACCGGTATACTTAG 835
||||| | || | |||| |||| ||||||||| | || || | || |||||| || |
Sbjct 792 GGCTTAATCA-TCTCCGACCTGCCTCTCCCCTC-A--ACTGCTAC-ACTGGTATATTTGG 846
Query 836 CTCTTTACTTCTCAGAGCCTCAGAGTCTAGGTCGGACCCAAAAACAATCGTTCACCGTTT 895
||||||||||||| |||||||||||||||||||||||||| |||| |||||||| |||||
Sbjct 847 CTCTTTACTTCTCGGAGCCTCAGAGTCTAGGTCGGACCCAGAAACGATCGTTCAACGTTT 906
Query 896 TCTTGGACGGCATGCAAGTGGGTTCACATCCCATAGTACCAGTTTTTGGGAAAGCGACTC 955
||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 907 TCTTGGACGACATGCAAGTGGGTTCACATCCCATCGTACCGGTTTTTGGGAAAGCGACTC 966
Query 956 AAGTCGTTTTAAGAGATGTA-ATGGCTAGTTCGGAGTCCCAGTTAGTTTTTAAGTCAACC 1014
|| ||||||| ||||||||| | ||| | ||||| |||||| |||| || ||||| ||
Sbjct 967 AACTCGTTTTGAGAGATGTAGA-GGCCACTTCGGGGTCCCAAATAGTCTTAAAGTCTACT 1025
Query 1015 GATGACTCGGGT-TTGCCGACCATCATCAGTGGTTTGGAGGTTTATTCGATAAGTAACTA 1073
|||||||||| | ||||||||||| |||| |||||||||| | ||||| ||||||||| |
Sbjct 1026 GATGACTCGG-TATTGCCGACCATGATCAATGGTTTGGAGCTATATTCCATAAGTAACAA 1084
Query 1074 -CAAGGACCGTGGAAGCGGAGG 1094
|| | || |||||||||||||
Sbjct 1085 TCA-GCACGGTGGAAGCGGAGG 1105
> AT3G46280.1 | Symbols: | protein kinase-related | chr3:17005483-17008424
REVERSE LENGTH=1619
Length=1619
Score = 852 bits (461), Expect = 0.0
Identities = 862/1054 (82%), Gaps = 34/1054 (3%)
Strand=Plus/Plus
Query 78 AGAAGGTATAAGCATTGACTGTGGAACAACGGGTTCCTACGTGGACTCCAACAATGTAAC 137
|||| |||||||||| ||||||||| |||| || || |||||||||||||||||||||||
Sbjct 80 AGAAAGTATAAGCATCGACTGTGGATCAACCGGATCTTACGTGGACTCCAACAATGTAAC 139
Query 138 ATGGGTCGGAGATAATGGCTTCGTTACCACCGGCGAATCCATTAATAT-CACGGACGTCG 196
||||||||||||||| |||||||| |||| |||||| |||| || || | ||||||| |
Sbjct 140 ATGGGTCGGAGATAAAGGCTTCGTCACCAACGGCGAGCCCATGAAGATTC-CGGACGTTG 198
Query 197 TAAATAAA-CCGATCAATACCCTCCGGTACTTTCCAACCGGTCAAACTAATTGCTACACC 255
| || ||| || ||||| || ||||||||||| ||||| |||||||| || |||||||||
Sbjct 199 TCAA-AAAGCCAATCAACACTCTCCGGTACTTCCCAACTGGTCAAACCAACTGCTACACC 257
Query 256 AACATTCCGGCGACAAAAGGCCGGAACACCCTTGTGAGGACGAAATTTTACTACAAAAAC 315
|||||||||| ||||||||||| ||| ||||| ||||||||||| |||||||| | |||
Sbjct 258 AACATTCCGGTGACAAAAGGCCAGAAAACCCTCGTGAGGACGAAGTTTTACTATGAGAAC 317
Query 316 TACGACGAGAA-TTACTCGCCACCATCTTTCGACGTGGTTTACGATGGGAAACACCGTGA 374
||||||| ||| || |||||| |||||||| || ||| |||| || ||||||||||||||
Sbjct 318 TACGACGCGAAGTT-CTCGCCGCCATCTTTTGATGTGATTTATGACGGGAAACACCGTGA 376
Query 375 TTCTATTGCGATTACAGCTGACTCGTTGTTCAGCGACGAGGAATCATTCCATTACTCTGA 434
|||||||| ||||| | || |||||| | | || || ||| | ||| ||| ||| ||
Sbjct 377 TTCTATTGTAATTAC--C-GAGTCGTTGCTAAATGATGAAGAAACGTTCTATTTCTCGGA 433
Query 435 GGTGATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGCCTCACCCGTACGTCTCCGTC 494
|||||||| || ||||| |||| ||||||||||||| || ||| ||||||||||||||
Sbjct 434 GGTGATATATGTTCCGGAGAATAAGAATATCAGCGTCTGTCTCTTACGTACGTCTCCGTC 493
Query 495 CGATAACCCTTTTATATCTTCCATTGAAGTTTACCACTTCG-ATGCCGGCATGTATGACG 553
||| ||||| |||||||| |||||||||||||| | || | | | |||||||| ||||
Sbjct 494 CGACAACCCATTTATATCGTCCATTGAAGTTTAT-AGTTTGGACACTGGCATGTACGACG 552
Query 554 ATCTTGGTCCTGAA-GAAGGTCTCATTCTCTATAAAAGAAATGCGTACGGTGCCACAA-A 611
||||||||||| || ||||||||||||||| | | |||| ||| |||||||||| || |
Sbjct 553 ATCTTGGTCCT-AACGAAGGTCTCATTCTCCACGACAGAATTGCATACGGTGCCA-AAGA 610
Query 612 GCTTATAAGCTACCCGTTAGATCCTTACAGTAGGCTATGGTTCCCAAAAGGGTCCCAAGA 671
||||||||||||||||||||| || ||| ||||| ||||||| | ||| ||||||||
Sbjct 611 GCTTATAAGCTACCCGTTAGACCCCTACGGTAGGGTATGGTTAGCGTTAGGATCCCAAGA 670
Query 672 CTACCCCGGACTGATCGATCTTACAACCTCAGCAACATCCATAGACATCACCGGAGCGTT 731
|| || | ||||| |||||| || |||||||| |||| |||||||||||||| ||||
Sbjct 671 CT-CCAC--ACTGACCGATCTAACGACCTCAGCCCCATCAATAGACATCACCGGGGCGTC 727
Query 732 GAACAAACCGCCAGAGATTGTTATGACGAAGGCAATGTCAGGAGACGGCTT--TACAATG 789
|||||| || ||||||||||||||| | |||||| | ||||||| |||||| ||| |
Sbjct 728 GAACAAGCCACCAGAGATTGTTATGTCAAAGGCATTATCAGGAGTCGGCTTAGTAC--TC 785
Query 790 TCCGGCCTGAATCTCCCCTCTAGTACCCCTCTACCGGTATACTTAGCTCTTTACTTCTCA 849
|| | || || ||| ||| ||| ||| |||| |||||||| | |||||||||||||
Sbjct 786 TCAGACCAGACTCTACCC-CTA--ACCGGAGTACCAGTATACTTGGTTCTTTACTTCTCA 842
Query 850 GAGCCTCAGAGTCTAGGTCGGACCCAAAAACAATCGTTCACCGTTTTCTTGGACGGCA-T 908
|||||||| ||||||||||| ||||| | || |||||||| ||||||||||||| || |
Sbjct 843 GAGCCTCAAAGTCTAGGTCGAACCCAGAGACGATCGTTCAACGTTTTCTTGGACAACACT 902
Query 909 GCAAGTGGGTTCACATCCCATAGTACCAGTTTTTGGGAAAGCGACTCAAGTCGTTTTAAG 968
||||||||||| | |||||| ||||| |||||||||||||| |||||| || |||| ||
Sbjct 903 -CAAGTGGGTTCGCGTCCCATCGTACCGGTTTTTGGGAAAGCAACTCAATTCATTTTGAG 961
Query 969 AGATGTAATGGCTAGTTCGGAGTCCCAGTTAGTTTTTAAGTCAACCGATGACTCGGGTTT 1028
||||||| |||| | |||| ||||||| |||| ||| ||||||| |||||||| | |||
Sbjct 962 AGATGTAGTGGCCACATCGGCGTCCCAGATAGTCTTTCAGTCAACGGATGACTCCGTTTT 1021
Query 1029 GCCGACCA-TCATCAGTGGTTTGGAGGTTTATTCGATAAGTAACTACAAG----GACCGT 1083
||| ||| |||||| || |||||| | || ||||||||||| ||| || ||| ||
Sbjct 1022 GCC-ACCCCTCATCAACGGATTGGAGCTGTACTCGATAAGTAA-TACCAGTCCAGACAGT 1079
Query 1084 GGAAGCGGAGGCGGGGGCCAAAGCGGCAGTAGTA 1117
||| |||| || || | |||| ||||| ||||||
Sbjct 1080 GGAGGCGGCGGTGGAGACCAAGGCGGCGGTAGTA 1113
> AT3G46250.1 | Symbols: | pseudogene, similar to leaf senescence-associated
receptor-like protein kinase, serine/threonine-specific
receptor protein kinase, Arabidopsis thaliana, PIR:S71277;
blastp match of 31% identity and 2.8e-15 P-value to
GP|9837280|gb|AAG00510.1||AF285172 leaf senescence-associated
receptor-like protein kinase {Phaseolus vulgaris} | chr3:16990102-16992407
REVERSE LENGTH=2306
Length=2306
Score = 580 bits (314), Expect = 7e-165
Identities = 476/551 (86%), Gaps = 24/551 (4%)
Strand=Plus/Plus
Query 83 GTATAAGCATTGACTGTGGAACAACGGGTTCCTACGTGGACTCCAACAATGTAACATGGG 142
|||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||
Sbjct 1 GTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCAATAACGTAACATGGG 60
Query 143 TCGGAGATAATGGCTTCGTTACCACCGGCGAATCCATTAATATCACGGACGTCGTA-AAT 201
||||||||||||||||||| || |||||||| ||||||||||| ||||||||| | |
Sbjct 61 TCGGAGATAATGGCTTCGTCACAACCGGCGAGTCCATTAATATTACGGACGTC--ACCAC 118
Query 202 AAA-CCGATCAATACCCTCCGGTACTTTCCAACCGGTCAAACTAATTGCTACACCAACAT 260
||| ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||
Sbjct 119 AAAGCCGATCAATACTCTCCGGTACTTTCCAACCGGTCAAACAAACTGCTACACCAACAT 178
Query 261 TCCGGCGACAAAAGGCCGGAACACCCTTGTGAGGACGAAATTTTACTACAAAAACTACGA 320
||||| ||||||| || |||| ||||| ||||||||||| | |||||| | ||||||||
Sbjct 179 TCCGGTGACAAAATGCAGGAAAACCCTCGTGAGGACGAAGTACTACTACGAGAACTACGA 238
Query 321 CGA-GAA-TT-AC-TCG---CCACCATCTTTCGACGTGGTTTACGATGGGAAACACCGTG 373
|| || || || | | | | ||||||||||| | ||||| || |||||||||||||
Sbjct 239 TGACAAAGTTGACATAGTTTCGA-CATCTTTCGACATAGTTTATGACGGGAAACACCGTG 297
Query 374 ATTCTATTGCGATTACAGCTGACTCGTTGTTCAG-CGACGAGGA-ATCATTCCATTACTC 431
||||| ||| ||| | |||| ||||| || | ||||||||| | |||| ||| |||
Sbjct 298 ATTCTGTTGATATT--A-CTGAGTCGTTACTC-GACGACGAGGACA-CATTTTATTTCTC 352
Query 432 TGAGGTGATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGCC-TCACCCGTACGTCTC 490
||||||||| ||||||||||||| |||||||||||||||||||| || |||||||||||
Sbjct 353 TGAGGTGATTTTTGCTCCGGCGAGTGAGAATATCAGCGTTTGCCTTC-TCCGTACGTCTC 411
Query 491 CGTCCGATAACCCTTTTATATCTTCCATTGAAGTTTACCA-CTTCGATGCCGGCATGTAT 549
|||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||
Sbjct 412 CGTCCGATAACCCTTT-ATATCTTCCATTGAAGTTTAC-AGCTTCGATGACGGCATGTAC 469
Query 550 GACGATCTTGGTCCTGAAGAAGGTCTCATTCTCTATAAAAGAAATGCGTACGGTGCCACA 609
| ||||||||||||||||||||||||||||||||| |||||| | ||||||| |||| |
Sbjct 470 AAAGATCTTGGTCCTGAAGAAGGTCTCATTCTCTATCAAAGAATTACGTACGGAGCCAAA 529
Query 610 AAGCTTATAAG 620
|||||||||||
Sbjct 530 AAGCTTATAAG 540
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56525813670
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5