BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg897446
Length=1371
Score E
Sequences producing significant alignments: (Bits) Value
AT3G46280.1 | Symbols: | protein kinase-related | chr3:1700548... 1014 0.0
AT3G46270.1 | Symbols: | receptor protein kinase-related | chr... 948 0.0
AT3G46260.1 | Symbols: | protein kinase-related | chr3:1699816... 878 0.0
AT3G46250.1 | Symbols: | pseudogene, similar to leaf senescenc... 510 1e-143
> AT3G46280.1 | Symbols: | protein kinase-related | chr3:17005483-17008424
REVERSE LENGTH=1619
Length=1619
Score = 1014 bits (549), Expect = 0.0
Identities = 855/1001 (85%), Gaps = 28/1001 (3%)
Strand=Plus/Plus
Query 57 AGAAAGTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCAACAATGTAAC 116
||||||||||||||| ||||||||| |||| ||||| |||||||||||||||||||||||
Sbjct 80 AGAAAGTATAAGCATCGACTGTGGATCAACCGGATCTTACGTGGACTCCAACAATGTAAC 139
Query 117 ATGGGTCGGAGATAATGGCTTCGTCACCACCGGCAAGCCCATGAACAATACGGACGTTGT 176
||||||||||||||| ||||||||||||| |||| |||||||||| | | ||||||||||
Sbjct 140 ATGGGTCGGAGATAAAGGCTTCGTCACCAACGGCGAGCCCATGAAGATTCCGGACGTTGT 199
Query 177 CACAAAGCCAATCAACAAC-CTCCGATACTTCCCTTCCGGTCAAACCAACTGCTACACCA 235
|| |||||||||||||| | ||||| |||||||| | ||||||||||||||||||||||
Sbjct 200 CAAAAAGCCAATCAACA-CTCTCCGGTACTTCCCAACTGGTCAAACCAACTGCTACACCA 258
Query 236 ACATTCCGGTAACCAAAGGCCGGAAAAACCTCGTGAGGACGAAATATTACTACGAGAACT 295
|||||||||| || ||||||| ||||| ||||||||||||||| | |||||| |||||||
Sbjct 259 ACATTCCGGTGACAAAAGGCCAGAAAACCCTCGTGAGGACGAAGTTTTACTATGAGAACT 318
Query 296 ACGACGGGAA-TTACTCGCCGCCATCTTTTGACGTGATTTACGATGGAAAACACCGTGAT 354
|||||| ||| || |||||||||||||||||| |||||||| || || ||||||||||||
Sbjct 319 ACGACGCGAAGTT-CTCGCCGCCATCTTTTGATGTGATTTATGACGGGAAACACCGTGAT 377
Query 355 TCTATTGAAATTACTGAGTCATCGGTCAACGACGAGGAGAGGTTCTATTTCTCGGAGTTG 414
||||||| |||||| ||||| | | | || || || || | |||||||||||||||| ||
Sbjct 378 TCTATTGTAATTACCGAGTCGTTGCTAAATGATGAAGAAACGTTCTATTTCTCGGAGGTG 437
Query 415 ATATTTGCTCCGGCGAATGAGAATATCAGCGTTTG-CTTCTTCCGTACGTCTCCGTCCCA 473
|||| || ||||| |||| ||||||||||||| || || ||| ||||||||||||||| |
Sbjct 438 ATATATGTTCCGGAGAATAAGAATATCAGCGTCTGTCT-CTTACGTACGTCTCCGTCCGA 496
Query 474 TAACCCTTTTATTTCTTCCATTGAAGTTTACAGCTTCGATACCGGCATGTACGCCGATCT 533
||||| ||||| || |||||||||||||| || || || || |||||||||| ||||||
Sbjct 497 CAACCCATTTATATCGTCCATTGAAGTTTATAGTTTGGACACTGGCATGTACGACGATCT 556
Query 534 TGGTCCCAACGAAGGTCTCATTCTTCAAGAAAGATATACC-TATGGTGCTGAAGAGTCT- 591
|||||| ||||||||||||||||| || || ||| || | || ||||| ||||| ||
Sbjct 557 TGGTCCTAACGAAGGTCTCATTCTCCACGACAGA-ATTGCATACGGTGCCAAAGAG-CTT 614
Query 592 ATAAGCTACCCGCTAGACCCTTATGGTAGGCTATGGTTACCGTCAGGTTCCGAATACAGT 651
|||||||||||| ||||||| || |||||| |||||||| ||| ||| ||| || || |
Sbjct 615 ATAAGCTACCCGTTAGACCCCTACGGTAGGGTATGGTTAGCGTTAGGATCCCAAGAC--T 672
Query 652 CTCTCACTGACGGATCTCAA-GACCTCAGCTCCATCAATAGACATCACCGGGGTC-TCTA 709
| | ||||||| ||||| || ||||||||| |||||||||||||||||||||| | || |
Sbjct 673 C-CACACTGACCGATCT-AACGACCTCAGCCCCATCAATAGACATCACCGGGG-CGTCGA 729
Query 710 ACAAGCCACCAGAGATTGTTATGTCAAAGGCATTGTCAGGAGATAG-CTTAATACTCTCC 768
|||||||||||||||||||||||||||||||||| ||||||| | | |||| |||||||
Sbjct 730 ACAAGCCACCAGAGATTGTTATGTCAAAGGCATTATCAGGAG-TCGGCTTAGTACTCTC- 787
Query 769 A-AC-ATGGGTCTGATCCCCTTAACCGGTCTACCGGTATATTTAGCTCTTTATTTCTCTG 826
| || | | ||| | ||||| |||||| |||| ||||| || | |||||| ||||| |
Sbjct 788 AGACCA-GACTCT-A-CCCCT-AACCGGAGTACCAGTATACTTGGTTCTTTACTTCTCAG 843
Query 827 AGCCTCAGAGTCTAGGTCGGACCCAGAGGCGGTCGTTCAACGtttttttGGATGACACAA 886
||||||| ||||||||||| |||||||| || |||||||||||||| ||||| ||||
Sbjct 844 AGCCTCAAAGTCTAGGTCGAACCCAGAGACGATCGTTCAACGTTTTCTTGGACAACACTC 903
Query 887 AAGTGGGTTCACGTCCCATCGTCCCGGTTTTTGGAAAAGCTACTCAAGTCATTTTGAGAG 946
|||||||||| ||||||||||| ||||||||||| ||||| |||||| ||||||||||||
Sbjct 904 AAGTGGGTTCGCGTCCCATCGTACCGGTTTTTGGGAAAGCAACTCAATTCATTTTGAGAG 963
Query 947 ATGTAGTGGCCACCTCCG-GATCTCAGATAGTCTTTCAGTCAACCGATGATTCGGTTCTG 1005
||||||||||||| || | | || |||||||||||||||||||| ||||| || ||| ||
Sbjct 964 ATGTAGTGGCCACATCGGCG-TCCCAGATAGTCTTTCAGTCAACGGATGACTCCGTTTTG 1022
Query 1006 CCGCCCATCATCAATGGTTTGGAGCTCTATTCGATAAGTAA 1046
|| ||| ||||||| || |||||||| || |||||||||||
Sbjct 1023 CCACCCCTCATCAACGGATTGGAGCTGTACTCGATAAGTAA 1063
> AT3G46270.1 | Symbols: | receptor protein kinase-related | chr3:17000641-17004251
REVERSE LENGTH=1673
Length=1673
Score = 948 bits (513), Expect = 0.0
Identities = 867/1033 (84%), Gaps = 44/1033 (4%)
Strand=Plus/Plus
Query 59 AAA-GTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCAACAATGTAACA 117
||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 96 AAAGGTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCAACAACGTAACA 155
Query 118 TGGGTCGGAGATAATGGCTTCGTCACCACCGGC-AAGCCCATGAACAATACGGACGTTGT 176
|||||||||||||| || ||||||||||||||| || || || || | |||||||||
Sbjct 156 TGGGTCGGAGATAAGGGTTTCGTCACCACCGGCGAATCC-ATTAATATTACGGACGTCAC 214
Query 177 CACAAAGCCAATCAACAAC-CTCCGATACTTCCCTTCCGGTCAAACCAACTGCTACACCA 235
||||||||| ||||| | | ||||| || || || |||||||||| |||||||||||||
Sbjct 215 CACAAAGCCGATCAATA-CTCTCCGGTATTTTCCAACCGGTCAAACAAACTGCTACACCA 273
Query 236 ACATTCCGGTAACCAAAGGCCGGAAAAACCTCGTGAGGACGAAATATTACTACGAGAACT 295
| |||||||| || |||||| |||||| ||||||||||||||| || |||||||||||||
Sbjct 274 ATATTCCGGTGACAAAAGGCAGGAAAACCCTCGTGAGGACGAAGTACTACTACGAGAACT 333
Query 296 ACGACGGGAA-TTACTCGCCGCCATCTTTTGACGT-GATTTACGATGGAAAACACCGTGA 353
|||| | || || ||||||||||||||| ||| | | |||| || || |||||||||||
Sbjct 334 ACGATGACAAGTT-CTCGCCGCCATCTTTCGACATAG-TTTATGACGGGAAACACCGTGA 391
Query 354 TTCTATTGAAATTACTGAGTCATCGGTCAACGACGAGGAGAGGTTCTATTTCTCGGAGTT 413
|||| |||| ||||||||||| | || |||||||||| | || |||||||| ||| |
Sbjct 392 TTCTGTTGATATTACTGAGTCGTTACTCGACGACGAGGACACATTTTATTTCTCTGAGGT 451
Query 414 GATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGC-TTCTTCCGTACGTCTCCGTCCC 472
||| ||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||
Sbjct 452 GATTTTTGCTCCGGCGAGTGAGAATATCAGCGTTTGCCTTCT-CCGTACGTCTCCGTCCG 510
Query 473 ATAACCCTTTTATTTCTTCCATTGAAGTTTACAGCTTCGAT-ACCGGCATGTACGCCGAT 531
||||||||||||| ||||||||||||||||||||||||||| || ||||||||| |||
Sbjct 511 ATAACCCTTTTATATCTTCCATTGAAGTTTACAGCTTCGATGAC-GGCATGTACAAAGAT 569
Query 532 CTTGGTCCC-AACGAAGGTCTCATTCTTCAAG-AAAGATAT-ACCTATGGTGCTGAAGAG 588
|||||||| || |||||||||||||| | | ||||| || || || || || || ||
Sbjct 570 CTTGGTCCTGAA-GAAGGTCTCATTCT-CTATCAAAGA-ATTACGTACGGAGCCAAAAAG 626
Query 589 TCT-ATAAGCTACCCGCTAGACCCTTAT-GGTAGGCTATGGT-TACCGTCAG-GTTCCGA 644
|| |||||||| ||| |||| |||| | ||||||||||||| | ||||||| || |||
Sbjct 627 -CTTATAAGCTATCCGTTAGATCCTT-TCGGTAGGCTATGGTCT-CCGTCAGCGT-CCGG 682
Query 645 ATACAGTCTCT-CACTGACGGATCTCAA-GACCTCAGCTCCATCAATAGACATCACCGGG 702
| ||| | | ||||||| ||||| | ||||||||| ||||| |||||||||||||||
Sbjct 683 AGACAA-CACCGCACTGACCGATCT-ATCGACCTCAGCCCCATCTATAGACATCACCGGG 740
Query 703 GTC-TCTAACAAGCCACCAGAGATTGTTATGTCAAAGGCATTGTCAGGAGATAGCTTAAT 761
| | ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 741 G-CGTCTAACAAGCCGCCAGAGATTGTTATGTCCAAGGCATTGTCAGGAGACGGCTTAAT 799
Query 762 -ACTCTCCAACATGGGTCTGATCCCCTTAACCGGTCTAC-C-GGTATATTTAGCTCTTTA 818
| ||||| || || ||| ||||| ||| | |||| | ||||||||| ||||||||
Sbjct 800 CA-TCTCCGACCTGCCTCT---CCCCTCAACTG--CTACACTGGTATATTTGGCTCTTTA 853
Query 819 TTTCTCTGAGCCTCAGAGTCTAGGTCGGACCCAGAGGCGGTCGTTCAACGtttttttGGA 878
||||| |||||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct 854 CTTCTCGGAGCCTCAGAGTCTAGGTCGGACCCAGAAACGATCGTTCAACGTTTTCTTGGA 913
Query 879 TGACACAAAAGTGGGTTCACGTCCCATCGTCCCGGTTTTTGGAAAAGCTACTCAAGTCAT 938
|||| |||||||||||| ||||||||| ||||||||||| ||||| |||||| || |
Sbjct 914 CGACATGCAAGTGGGTTCACATCCCATCGTACCGGTTTTTGGGAAAGCGACTCAACTCGT 973
Query 939 TTTGAGAGATGTAGTGGCCACCTCCGGATCTCAGATAGTCTTTCAGTCAACCGATGATTC 998
|||||||||||||| |||||| || || || || |||||||| |||| || ||||| ||
Sbjct 974 TTTGAGAGATGTAGAGGCCACTTCGGGGTCCCAAATAGTCTTAAAGTCTACTGATGACTC 1033
Query 999 GGT-TCTGCCGCCCATCATCAATGGTTTGGAGCTCTATTCGATAAGTAACAGCCGGGATG 1057
||| | ||||| |||| ||||||||||||||||| ||||| |||||||||| | | | |
Sbjct 1034 GGTAT-TGCCGACCATGATCAATGGTTTGGAGCTATATTCCATAAGTAACAATCAGCACG 1092
Query 1058 GTGGAGGCGGAGG 1070
||||| |||||||
Sbjct 1093 GTGGAAGCGGAGG 1105
> AT3G46260.1 | Symbols: | protein kinase-related | chr3:16998163-16999992
REVERSE LENGTH=1305
Length=1305
Score = 878 bits (475), Expect = 0.0
Identities = 858/1040 (83%), Gaps = 37/1040 (4%)
Strand=Plus/Plus
Query 52 CTCACAGAAAGTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCAACAAT 111
|||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 74 CTCA-AGAAGGTATAAGCATTGACTGTGGAACAACGGGTTCCTACGTGGACTCCAACAAT 132
Query 112 GTAACATGGGTCGGAGATAATGGCTTCGTCACCACCGGCAAGCCCATGAACAAT-ACGGA 170
|||||||||||||||||||| |||||||||||||||||| || |||| || | | |||||
Sbjct 133 GTAACATGGGTCGGAGATAAAGGCTTCGTCACCACCGGCGAGTCCATTAATA-TCACGGA 191
Query 171 CGTTGTCACAAAGCCAATCAACAACCTCCGATACTTCCCTTCCGGTCAAACCAACTGCTA 230
||| |||| ||| || ||||| | |||||| ||||| || | |||||||| || |||||
Sbjct 192 CGTCGTCAAAAAACCGATCAATACCCTCCGGTACTTTCCAACAGGTCAAACAAATTGCTA 251
Query 231 CACCAACATTCCGGTAACCAAAGGCCGGAAAAACCTCGTGAGGACGAAATATTACTACGA 290
|||||||||||| | || |||||||||| | ||||||||||||||||| ||||||| |
Sbjct 252 CACCAACATTCCAGCGACAAAAGGCCGGACCACCCTCGTGAGGACGAAATTTTACTACAA 311
Query 291 GAACTACGACGGGAATTACTCGCCGCCATCTTTTGACGTGATTTACGATGGAAAACACCG 350
||||| |||| |||||||||||| |||||||| |||||| |||||||||| ||||||||
Sbjct 312 AAACTATGACGAGAATTACTCGCCACCATCTTTCGACGTGGTTTACGATGGGAAACACCG 371
Query 351 TGATTCTATTGAAATTAC--T-GAGTCATCGGTCAACGACGAGGAGAGGTTCTATTTCTC 407
| ||||||||| || || | || || | | ||| ||||||||| | ||| ||| |||
Sbjct 372 TAATTCTATTGCTATGACAGTTGACTCGTTGTTCAGCGACGAGGAAACATTCCATTACTC 431
Query 408 GGAGTTGATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGCTTCTTCCGTACGTCTCC 467
||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 432 TGAGGTGATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGCCTCGTCCGTACGTCTCC 491
Query 468 GTCCCATAACCCTTTTATTTCTTCCATTGAAGTTTACAGCTTCGATACCGGCATGTACGC 527
|||| ||||||||||||| |||||||||||||||||| |||||||| |||||||||| |
Sbjct 492 GTCCGATAACCCTTTTATATCTTCCATTGAAGTTTACCGCTTCGATGCCGGCATGTATGA 551
Query 528 CGATCTTGGTCCC-AACGAAGGTCTCATTCTTCAAGAAA-GATATACCTATGGTGCTG-A 584
|||||||||||| || |||||| ||||||| | | ||| || || | || ||||| |
Sbjct 552 CGATCTTGGTCCTGAA-GAAGGTTTCATTCT-CTATAAAAGAAATGCGTACGGTGCCACA 609
Query 585 AGAGTCT-ATAAGCTACCCGCTAGACCCTTATGGTAGGCTATGGTTACCGTCAGGTTCCG 643
| || || |||||||||||| |||| ||||| ||||||||||||| || ||| |||
Sbjct 610 A-AG-CTTATAAGCTACCCGTTAGATCCTTACGGTAGGCTATGGTCCCCAAAAGGGTCCC 667
Query 644 AATAC-AGTCTCTCACTGA-CGGATCTCA-AGACCTCAGCTCCATCAATAGACATCACCG 700
|| || | || | ||||| || |||| | | |||||||| ||||| ||||| |||||||
Sbjct 668 AAGACTA-TCCCGGACTGATCG-ATCTTACA-ACCTCAGCCCCATCCATAGATATCACCG 724
Query 701 G-G-GTCTCTAACAAGCCACCAGAGATTGTTATGTCAAAGGCATTGTCAGGAGATAGCTT 758
| | || | ||||| || ||||||||||||||| | |||||| |||||||||| ||||
Sbjct 725 GAGCGT-TG-AACAAACCGCCAGAGATTGTTATGACGAAGGCAATGTCAGGAGACGGCTT 782
Query 759 AATACTCTCCAACATGGGTCTGATCCCCT-TAACCGGTCTACCGGTATATTTAGCTCTTT 817
||| | ||| | || ||| ||||| || || |||||||||||| ||||||||||
Sbjct 783 TATAATGTCCGGCCTGAATCT---CCCCTCTACCCT-TCTACCGGTATACTTAGCTCTTT 838
Query 818 A-TTTCTCTGAGCCTCAGAGTCTAGGTCGGACCCAGAGGCGGTCGTTCAACGtttttttG 876
| ||| || |||||||||||||||||||||||||| | || ||||||| |||||| |||
Sbjct 839 ACTTT-TCAGAGCCTCAGAGTCTAGGTCGGACCCAAAAACGATCGTTCACCGTTTTCTTG 897
Query 877 GATGACACAAAAGTGGGTTCACGTCCCATCGTCCCGGTTTTTGGAAAAGCTACTCAAGTC 936
|| | || |||||||||||| |||||| || || |||||||| ||||| |||||||||
Sbjct 898 GACGGCATGCAAGTGGGTTCACATCCCATAGTACCAGTTTTTGGGAAAGCGACTCAAGTC 957
Query 937 ATTTTGAGAGATGTAGTGGCCACCTCCGGA-TCTCAGATAGTCTTTCAGTCAACCGATGA 995
|||| |||||| || |||||| || ||| || ||| |||| ||| |||||||||||||
Sbjct 958 GTTTTAAGAGATATAATGGCCAGTTC-GGAGTCCCAGTTAGTTTTTAAGTCAACCGATGA 1016
Query 996 TTCGG-TTCTGCCGCCCATCATCAATGGTTTGGAGCTCTATTCGATAAGTAAC-AGCCGG 1053
|||| || ||||| ||||||||| |||||||||| ||||||||||||||||| | | |
Sbjct 1017 CTCGGGTT-TGCCGACCATCATCAGTGGTTTGGAGGTCTATTCGATAAGTAACTA-CAAG 1074
Query 1054 GATGGTGGAGGCGGAGGCGG 1073
|| |||| ||||||||||
Sbjct 1075 GACCATGGAAGCGGAGGCGG 1094
> AT3G46250.1 | Symbols: | pseudogene, similar to leaf senescence-associated
receptor-like protein kinase, serine/threonine-specific
receptor protein kinase, Arabidopsis thaliana, PIR:S71277;
blastp match of 31% identity and 2.8e-15 P-value to
GP|9837280|gb|AAG00510.1||AF285172 leaf senescence-associated
receptor-like protein kinase {Phaseolus vulgaris} | chr3:16990102-16992407
REVERSE LENGTH=2306
Length=2306
Score = 510 bits (276), Expect = 1e-143
Identities = 433/507 (85%), Gaps = 17/507 (3%)
Strand=Plus/Plus
Query 62 GTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCAACAATGTAACATGGG 121
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1 GTATAAGCATTGACTGTGGAACAACGGGATCCTACGTGGACTCCAATAACGTAACATGGG 60
Query 122 TCGGAGATAATGGCTTCGTCACCACCGGCAAGCCCATGAACAATACGGACGTTGTCACAA 181
|||||||||||||||||||||| |||||| || |||| || | ||||||||| |||||
Sbjct 61 TCGGAGATAATGGCTTCGTCACAACCGGCGAGTCCATTAATATTACGGACGTCACCACAA 120
Query 182 AGCCAATCAACAAC-CTCCGATACTTCCCTTCCGGTCAAACCAACTGCTACACCAACATT 240
|||| ||||| | | ||||| ||||| || |||||||||| ||||||||||||||||||
Sbjct 121 AGCCGATCAATA-CTCTCCGGTACTTTCCAACCGGTCAAACAAACTGCTACACCAACATT 179
Query 241 CCGGTAACCAAAGGCCGGAAAAACCTCGTGAGGACGAAATATTACTACGAGAACTACGAC 300
||||| || ||| || |||||| ||||||||||||||| || |||||||||||||||||
Sbjct 180 CCGGTGACAAAATGCAGGAAAACCCTCGTGAGGACGAAGTACTACTACGAGAACTACGAT 239
Query 301 GGGAA--TT-AC-TCGC--CGCCATCTTTTGACGT-GATTTACGATGGAAAACACCGTGA 353
| || || || | | || ||||||| ||| | | |||| || || |||||||||||
Sbjct 240 GACAAAGTTGACATAGTTTCGACATCTTTCGACATAG-TTTATGACGGGAAACACCGTGA 298
Query 354 TTCTATTGAAATTACTGAGTCATCGGTCAACGACGAGGAGAGGTTCTATTTCTCGGAGTT 413
|||| |||| ||||||||||| | || |||||||||| | || |||||||| ||| |
Sbjct 299 TTCTGTTGATATTACTGAGTCGTTACTCGACGACGAGGACACATTTTATTTCTCTGAGGT 358
Query 414 GATATTTGCTCCGGCGAATGAGAATATCAGCGTTTGC-TTCTTCCGTACGTCTCCGTCCC 472
||| ||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||
Sbjct 359 GATTTTTGCTCCGGCGAGTGAGAATATCAGCGTTTGCCTTCT-CCGTACGTCTCCGTCCG 417
Query 473 ATAACCCTTTTATTTCTTCCATTGAAGTTTACAGCTTCGAT-ACCGGCATGTACGCCGAT 531
|||||||||| || ||||||||||||||||||||||||||| || ||||||||| |||
Sbjct 418 ATAACCCTTT-ATATCTTCCATTGAAGTTTACAGCTTCGATGAC-GGCATGTACAAAGAT 475
Query 532 CTTGGTCCC-AACGAAGGTCTCATTCT 557
|||||||| || ||||||||||||||
Sbjct 476 CTTGGTCCTGAA-GAAGGTCTCATTCT 501
Score = 422 bits (228), Expect = 6e-117
Identities = 403/485 (83%), Gaps = 21/485 (4%)
Strand=Plus/Plus
Query 595 AGCTACCCGCTAGACCCTTAT-GGTAGGCTATGGT-TACCGTCAG-GTTCCGAATAC-AG 650
||||| ||| |||| |||| | ||||||||||||| | ||||||| | |||| | || |
Sbjct 841 AGCTATCCGTTAGATCCTT-TCGGTAGGCTATGGTCT-CCGTCAGCG-TCCGGAGACAAC 897
Query 651 TCTCTCACTGACGGATCTCA-AGACCTCAGCTCCATCAATAGACATCACCGGGGTC-TCT 708
| | ||||||| ||||| | ||||||||| ||||| |||||||||||||||| | |||
Sbjct 898 AC-CGCACTGACCGATCT-ATCGACCTCAGCCCCATCTATAGACATCACCGGGG-CGTCT 954
Query 709 AACAAGCCACCAGAGATTGTTATGTCAAAGGCATTGTCAGGAGATAGCTTAATAC-TCTC 767
|||||||| ||||||||||||||||| ||||||||||||||||| ||||||| | ||||
Sbjct 955 AACAAGCCGCCAGAGATTGTTATGTCCAAGGCATTGTCAGGAGACGGCTTAAT-CATCTC 1013
Query 768 CAACATGGGTCTGATCCCCTTAACCGGTCTAC-C-GGTATATTTAGCTCTTTATTTCTCT 825
| || | | || |||||| || | | |||| | ||||||||| |||||||| |||||
Sbjct 1014 CGACCT--GCCT-CTCCCCTCAA-CTG-CTACACTGGTATATTTGGCTCTTTACTTCTCG 1068
Query 826 GAGCCTCAGAGTCTAGGTCGGACCCAGAGGCGGTCGTTCAACGtttttttGGATGACACA 885
|||||||||||||||||||||||||||| || |||||||||||||| ||||| ||||
Sbjct 1069 GAGCCTCAGAGTCTAGGTCGGACCCAGAAACGATCGTTCAACGTTTTCTTGGACGACATG 1128
Query 886 AAAGTGGGTTCACGTCCCATCGTCCCGGTTTTTGGAAAAGCTACTCAAGTCATTTTGAGA 945
|||||||||||| ||||||||| ||||||||||| ||||| |||||| || ||||||||
Sbjct 1129 CAAGTGGGTTCACATCCCATCGTACCGGTTTTTGGGAAAGCGACTCAACTCGTTTTGAGA 1188
Query 946 GATGTAGTGGCCACCTCCGGATCTCAGATAGTCTTTCAGTCAACCGATGATTCGGTTCTG 1005
||||||| |||||| || || || || |||||||| |||| || ||||| |||||| ||
Sbjct 1189 GATGTAGAGGCCACTTCGGGGTCCCAAATAGTCTTAAAGTCTACTGATGACTCGGTTTTG 1248
Query 1006 CCGCCCATCATCAATGGTTTGGAGCTCTATTCGATAAGTAACAGCCGGGATGGTGGAGGC 1065
|| |||| ||||||||||||||||| ||||| |||||||||| || | | |||||| ||
Sbjct 1249 CCAACCATGATCAATGGTTTGGAGCTATATTCCATAAGTAACAACCAGCACGGTGGAAGC 1308
Query 1066 GGAGG 1070
|||||
Sbjct 1309 GGAGG 1313
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67519733025
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5