BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg897524
Length=2259
Score E
Sequences producing significant alignments: (Bits) Value
AT2G39280.2 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfami... 2726 0.0
AT3G55020.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfami... 1546 0.0
> AT2G39280.2 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily
protein | chr2:16401526-16406854 REVERSE LENGTH=2846
Length=2846
Score = 2726 bits (1476), Expect = 0.0
Identities = 1651/1736 (95%), Gaps = 10/1736 (1%)
Strand=Plus/Plus
Query 37 AGGGATGCATATGGATTTTCTGTGAGGCCTCAGCATGTGCAAAGATACCGAGAATATGTT 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 325 AGGGATGCATATGGATTTTCTGTGAGGCCTCAGCATGTGCAAAGATACCGAGAATATGTT 384
Query 97 AATATCTACAAGGAGGAAGAAGAGGAGAGGTCGGCCAGGTGGAACAATTTCCTGGAAGAT 156
|||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||| |
Sbjct 385 AATATCTACAAGGAGGAAGAAGTGGAGAGGTCGGCAAGGTGGAGCAATTTCCTGGAATTT 444
Query 157 CATGCAGAATCTGGCGTG-----T-CGAATGGATCGTCTGAAAATAATCATGTCAATCCA 210
|||||||||||||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct 445 CATGCAGAATCTGGCGTGTCACCTACGAATGGATCGTCTGAAAATACTCATGTCAATCCA 504
Query 211 AGTGAAAGTGACAAGAAAATAGAAGAGGAATCAAACAAGGGTGCTGAAAGAAAAGATCTG 270
||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||
Sbjct 505 AGTGAAAGTGACAAGAAAAAAGAAAAGGAATTAAACAAGGGTGCTGAAAGAAAAGATCTG 564
Query 271 AATACTGAAAAGCCAGGTTCTGATTTAAATCCTGGGAATGCGAGAGAGGAAGATGAGGTT 330
||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 565 AATGCTGACAAGCCAGGTTCTGATTTAACTCCTGGGAATGCGAGAGAGGAAGATGAAGTT 624
Query 331 CCCAAT-GCAGAGAAAAATGTGCACAAAGTTCTGTTGTGGGCTGAGATCAGACCATCTCT 389
|||||| | |||||| |||||||||||||||| ||| |||||||||||||| ||||||||
Sbjct 625 CCCAATAG-AGAGAAGAATGTGCACAAAGTTCAGTTATGGGCTGAGATCAGGCCATCTCT 683
Query 390 TCAAGCAATTGAGGACTTGATGAGTGTCCGTGTCAAAATAAAGGGGGATTCCACAAATGG 449
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 684 TCAAGCAATTGAGGACTTGATGAGTGTCCGTGTCAAAATGAAGGGGGATTCCACAAATGG 743
Query 450 CGAGCAAGAAGCTCAGAAATTGAATTCCTTACCCTCTACTGATGAGACCAAATCTTCAAA 509
||||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||||
Sbjct 744 CGAGCAAGAAGCTCAGAAATTGAATTCCTTAGCCTCAACTGATGAGACCGAGTCTTCAAA 803
Query 510 GGGAGTGTCTGAGAATGATTCTGAAGATGAGTTCTATGATGTGGAAAGATCAGATCCAAT 569
|||||| | |||||||||||| ||||| ||||||||||||| ||| ||||||||||||||
Sbjct 804 GGGAGTATGTGAGAATGATTCCGAAGACGAGTTCTATGATGCGGAGAGATCAGATCCAAT 863
Query 570 TCAGGATGGTTCTTCAGATAGTACAAGTGTCTCCAGCATGTCTGCTGCTGCTGATGCAAC 629
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |
Sbjct 864 TCAGGATGGTTCTTCAGATGGCACAAGTGTCTCCAGCATGTCTGCTGCTGCTGATGCAGC 923
Query 630 TTCCCTAATATCTGCATGCCCCTGGAAGGACGAACTTGAAGTTCTTGTTCATGGCGGGGC 689
||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||| ||
Sbjct 924 TTCCCTAGTATCTGCATGCCCCTGGAAAGACGAACTTGAAGTTCTTATTCATGGCGGTGC 983
Query 690 ACCTATGGCTCTGAGGGGTGAGCTCTGGCAAGCATTTGCGGGAGTCAAGAAACGTCGGGT 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 984 ACCTATGGCTCTGAGGGGTGAGCTCTGGCAAGCATTTGCGGGAGTCAAGAAACGTCGGGT 1043
Query 750 CAAGAATTATTACCAAAATCTGCTAGCTGCTGATAGTCTAGGAAACGACATAGAGCAGGA 809
||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 1044 CAAGAATTATTACCAAAATCTATTAGCTGCAGATAGTCTAGGAAACGACATAGAGCAGGA 1103
Query 810 GCACATGCAGCATGCAGATGAGAAAGGTTCAAGTACAGACCCCATCGCTGTTGTAGAAAA 869
|| |||||||||| ||||||||||||||||||||||||||||| || ||||||| |||||
Sbjct 1104 GCTCATGCAGCATACAGATGAGAAAGGTTCAAGTACAGACCCCCTCTCTGTTGTGGAAAA 1163
Query 870 ATGGAAAGGACAGATAGAAAAGGATTTACCCCGGACATTTCCAGGTCATCCTGCCCTAGA 929
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164 ATGGAAAGGTCAGATAGAAAAGGATTTACCCCGGACATTTCCAGGTCATCCTGCCCTAGA 1223
Query 930 TGATGATTTCAGAAATGCTCTGCGGCGATTGCTAACTGCCTATGCTAGGCATAATCCCTC 989
|||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||
Sbjct 1224 TGATGATTTCAGAAATGCTCTGAGGCGATTGCTAACTGCTTATGCCAGGCATAATCCCTC 1283
Query 990 TGTTGGATACTGTCAGGCAATGAATTTCTTCGCTGCACTTTTATTACTTCTGATGCCCGA 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284 TGTTGGATACTGTCAGGCAATGAATTTCTTCGCTGCACTTTTATTACTTCTGATGCCCGA 1343
Query 1050 AGAAAATGCCTTTTGGTCGCTTATAGGAATCATTGATGACTACTTCCATGATTATTATTC 1109
||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1344 AGAGAATGCTTTTTGGTCGCTTACAGGAATCATTGATGACTACTTCCATGATTATTATTC 1403
Query 1110 AGAAGAGATGATCGAATCCCAGGTTGACCAACGAGTTCTGGAGGAGTTGCTTCGAGAGCG 1169
|||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 1404 AGAAGAGATGCTCGAGTCCCAGGTTGACCAACGAGTTCTGGAGGAGTTACTTCGAGAGAG 1463
Query 1170 ATTTCCTAAATTGGTTCATCATCTAGATTTTCTTGGAGTCCAGGTGGCTTGTGTTACAGG 1229
||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||
Sbjct 1464 ATTTCCTAAATTGGTTCATCATCTAGATTATCTTGGAGTGCAGGTGGCTTGCGTTACAGG 1523
Query 1230 GCCATGGTTTCTTTCCATCTTCATTAATATGCTTCCATGGGAAAGTGTTCTCAGAGTGTG 1289
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1524 GCCATGGTTTCTTACCATCTTCATTAATATGCTTCCATGGGAAAGTGTTCTCAGAGTGTG 1583
Query 1290 GGATGTGCTTCTATTTGAAGGAAATCGTGTTATGCTTTTCAGAACAGCACTCGCATTGGT 1349
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1584 GGATGTGCTTCTATTTGAAGGAAATCGTGTTATGCTTTTCAGAACAGCACTCGCATTGAT 1643
Query 1350 GGAATTTTACGGTCCTGCATTGGTTACAACCAAGGACACTGGAGATGCTGTTACTTTGTT 1409
||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 1644 GGAATTTTATGGTCCTGCATTGGTTACAACCAAGGACATTGGAGATGCTGTTACTTTGCT 1703
Query 1410 ACAGTCAATGACTGGTTCAACATTTGATAGCAGCCAGCTCGTTTTCACTGCTTGCATGGG 1469
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1704 ACAATCAATGACTGGTTCAACATTTGATAGCAGCCAGCTCGTTTTCACTGCTTGCATGGG 1763
Query 1470 GTACCAAAGTGTACATGAAAGTAGATTGCAGGAACTAAGAAGCAAACACAGGCCAGCAGT 1529
||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1764 TTACCAAAATGTACATGAAAGTAAATTGCAGGAACTAAGAAGCAAACACAGGCCAGCAGT 1823
Query 1530 AATAGCTGCATTTGAGGAAAGATTAAAGGGGCTTCAAGCTTGGAGGGATTCAAAAGGCCC 1589
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |
Sbjct 1824 AATAGCTGCATTTGAGGAAAGATTAAAGGGTCTTCAAGCTTGGAGGGATTCAAAAGACAC 1883
Query 1590 TGCGACCAAATTACATAATTCTAAGCAAGACCCAAATTCTGTTTTAGCTAGCAAAGCCTC 1649
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1884 TGCAACCAAATTACATAATTCCAAGCAAGACCCAAATTCTGTTTTAGCTAGCAAAGCCTC 1943
Query 1650 ATCGTCAAATGGGAGTTTATCTCGTTCTGAATCAGGATCCAGTTATGCAGACGACGTCTT 1709
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1944 ATTGTCAAATGGGAGTTTATCTCGTTCTGAATCGGGATCCAGTTATGCAGACGACATCTT 2003
Query 1710 TATTAGCCTGACTGGGGATGGTGAGATAGAT-TGTTTTCAAGATCTTCAAGGACAG 1764
||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||
Sbjct 2004 TATTAGCCTGACTGGGGATTGTGAGATAGATAT-TTTTCAAGATCTTCAAGGACAG 2058
Score = 499 bits (270), Expect = 4e-140
Identities = 449/525 (86%), Gaps = 53/525 (10%)
Strand=Plus/Plus
Query 1763 AGTTGGAGATAGCTCTCATGGAGATGGTCAAACAAGATAATCGACGTCAACTGAAGGCTA 1822
|||||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||
Sbjct 2114 AGTTGGAGGTAGCTCTCATGGAGATGGTCAAACAAGACAATCGGCGTCAACTTAAGGCTA 2173
Query 1823 AGATTGAGCAGTTAGAGCAAGAGGTGACAAAGCTTCGAAGACTTGTTTCTGATAAGAGGG 1882
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 2174 AGATTGAGCAGTTAGAGCAAGGGGTGACAGAGCTTCGAAGACTTGTTTCTGATAAGAGGG 2233
Query 1883 AACAAGAAGGTGCTAACTATGATACAGACCACTTGAAATTTATGAAGGTCTTGATGCGGA 1942
| |||||| ||| ||||||| || |||||||||||||||
Sbjct 2234 AGCAAGAAAGTG----CTATGAT-------AC-------------AGGTCTTGATGCGGA 2269
Query 1943 TGGAGCAAGAACATAAAGTAACAGAAGATGCACGGAGACTTGCTGAGCAGGATGCAGCAG 2002
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2270 TGGAGCAAGAACATAAAGTAACAGAAGATGCACGGAGACTTGCTGAGCAGGATGCAGCAA 2329
Query 2003 CTCAGAGACATGCTGCTGAAGTGCTTCAGGAAAAGTATGAAGAAGCTGTTGCAGCGCTCG 2062
| |||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 2330 CGCAGAGATATGCTGCTGAAGTGCTTCAGGAAAAGTATGAAGAGGCTGTTGCAGCTCTCG 2389
Query 2063 ATGAGATGGAGAAGAGGGCAGTTATGGCAGAGTCCATGTTGGAGGCGACTTTGCAGTATC 2122
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2390 CGGAGATGGAGGAGAGGGCAGTTATGGCAGAGTCCATGTTGGAGGCGACTTTGCAGTATC 2449
Query 2123 AATCTGGCCAAGTTAAAGCACAACCTTCACCACGGT--CTG--------TTT-C---TCA 2168
||||||||||||||||||||||||||||||||||| ||| ||| | |||
Sbjct 2450 AATCTGGCCAAGTTAAAGCACAACCTTCACCACGGCAACTGAAGCAAGATTTGCCGGTCA 2509
Query 2169 -GG-CA-T----A---T---ATC-AAAACTCTACATATCAAAAACCTAAGGAGCAAGTTA 2214
|| || | | | ||| |||| |||||||| ||| |||||||||||||||||
Sbjct 2510 TGGTCAGTCCCTAGAATCTTATCCAAAAGACTACATATGAAAGACCTAAGGAGCAAGTTA 2569
Query 2215 ATGACGCGAAGTCATCAACAGAAGGACAAAACACAAACTTCATAG 2259
| |||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 2570 ACGACGAGAAGTCATCAACAGAAGGACAAA-CACAAACTTCATAG 2613
Score = 73.1 bits (39), Expect = 1e-11
Identities = 39/39 (100%), Gaps = 0/39 (0%)
Strand=Plus/Plus
Query 1 ATGATCGCCGACGCCGTTTCTAAGTCTGACCACAAAAGG 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 205 ATGATCGCCGACGCCGTTTCTAAGTCTGACCACAAAAGG 243
> AT3G55020.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily
protein | chr3:20388869-20394911 REVERSE LENGTH=2941
Length=2941
Score = 1546 bits (837), Expect = 0.0
Identities = 1466/1765 (83%), Gaps = 61/1765 (3%)
Strand=Plus/Plus
Query 27 TGACCACAAAAGGGATGCATATGGATTTTCTGTGAGGCCTCAGCATGTGCAAAGATACCG 86
||| ||||| ||||||||||| |||||| |||| || ||||| |||||||| |||||| |
Sbjct 270 TGAGCACAAGAGGGATGCATACGGATTTCCTGTCAGACCTCAACATGTGCAGAGATACAG 329
Query 87 AGAATATGTTAATATCTACAAGGAGGAAGAAGAGGAGAGGTCGGCCAGGTGGAACAATTT 146
|||||||| | |||| |||||||| |||||||| || ||||||| |||||||| || |||
Sbjct 330 AGAATATGCTGATATTTACAAGGAAGAAGAAGAAGAAAGGTCGGACAGGTGGAGCAGTTT 389
Query 147 CCTGGAAGATCATGCAGAAT---CTGGCG-T--GT-CGAATGGATCGTCTGAAAATAATC 199
| |||||||||||| |||| || | | | | | || ||||| |||||||||| ||
Sbjct 390 CTTGGAAGATCATGTTGAATCGACT-GAGTTACCTACAAACGGATCTTCTGAAAATATTC 448
Query 200 ATGTCAATCC---AAGTGAAAGTGACAA-GAAAATAGAAGAGGAATCAAACAAGGGTG-C 254
| | | | || ||||||||||| || ||||| |||| | |||| ||||||||| | |
Sbjct 449 ACG-C-A-CCGTTTAGTGAAAGTGAGAAGGAAAA-AGAAAAAGAATTAAACAAGGG-GCC 503
Query 255 TGAAAGAAAAGATCTGAATACTGAAAAGCCAGGTTCTGATTTAAATCCTGGGAATGCGAG 314
|| | |||||||| ||||||| ||| |||||||||| ||| ||||| ||||| ||
Sbjct 504 TG---GTGAAGATCTGCATACTGACAAGTTAGGTTCTGATGTAACTCCTGATAATGCCAG 560
Query 315 AGAGGAAG-ATGAGGTTCCCAATGCAGAGAAAAATGTGCACAAAGTTCTGTTGTGGGCTG 373
|| |||| | || ||| |||||||||| ||||| |||| ||| | || ||| |||
Sbjct 561 TGAAGAAGAAGGA-CACCCCGATGCAGAGAAGAATGTTCACAGAGTGCAATTATGGACTG 619
Query 374 AGATCAGACCATCTCTT-CAAGCAATTGAGGACTTGATGAGTGTCCGTGTCAA-AATAAA 431
|||||||||| ||| || | | ||||||| ||||||||||| |||||||||| || ||
Sbjct 620 AGATCAGACCGTCT-TTACGATCAATTGAAGACTTGATGAGCATCCGTGTCAAGAA-GAA 677
Query 432 GGGGGATTCCA-CAAATGGCGAGCAAGAAGCTCAGAAATTG-A-ATTCCTTACCCTCTA- 487
|||||||| | |||| |||||||||| |||| ||| || | ||| | ||| || |
Sbjct 678 GGGGGATT-TATCAAAAAGCGAGCAAGAGGCTCCGAAGGTGAAGATT--TCACCTTC-AT 733
Query 488 CTGATGA-GACCAAATCTTCAAAGGGAGTGTCTGAGAATGATTCTGAAGATGAGTTCTAT 546
|||||| | |||||||||| ||||||| ||||| | |||||||||||| |||||||||
Sbjct 734 TTGATGATG-CCAAATCTTCCAAGGGAGCATCTGATATTGATTCTGAAGACGAGTTCTAT 792
Query 547 GATGTGGAAAGATCAGATCCAATTCAGGATGG---TTCTTCAGATAGTACAAGTGTCTCC 603
||||| || || || ||| |||||||||| |||||||||| ||||| |||||||
Sbjct 793 GATGTTGAGAGGTCCGAT---GTTCAGGATGGTTCTTCTTCAGATGGTACAGGTGTCTCT 849
Query 604 AGCATGTCTGCTGCTGCTGATGCAACTTCCCTAATATCTGCATGCCCCTGGAAGGACGAA 663
| || ||| |||||||||||||| | || | | ||| |||| || |||||||| |||
Sbjct 850 GGTATCCCTGTTGCTGCTGATGCAA-GT-CC-ACTGTCTACATGTCCTTGGAAGGAAGAA 906
Query 664 CTTGAAGTTCTTG-TTCATGGCGGGGCACCTATGGCTCTGAGGGGTGAGCTCTGGCAAGC 722
|||||||| | || ||| ||||| | |||||||||||||||||| ||| | ||||||||
Sbjct 907 CTTGAAGTGC-TGATTCGCGGCGGTGTACCTATGGCTCTGAGGGGAGAGTTATGGCAAGC 965
Query 723 ATTTGCGGGAGTCAAGAAACGTCGGGT-CAAGAATTATTACCAAAATCTGCTAGCTGCTG 781
||| | ||| || | |||||| | | | |||| ||||||| ||||| || || || || |
Sbjct 966 ATTCGTGGGCGTGAGGAAACGAC-GATGCAAGGATTATTATCAAAACCTTCTTGCAGCAG 1024
Query 782 ATAG-TCTAGGAAACGA-CATAGAGCAGGAGCACATGCAGCATGCAGATGAGAAAGGTTC 839
|| | ||| | |||| | ||||||||| ||| | |||||||||| ||||| ||||||||
Sbjct 1025 ATGGTTCT-GTAAAC-ACCATAGAGCAAGAGGATATGCAGCATGTTGATGATAAAGGTTC 1082
Query 840 AAGTACAGACCCCATCGCTGTTGTAGAAAAATGGAAAGGACAGATAGAAAAGGATTTACC 899
||||||||| | || |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1083 AAGTACAGAATCTATTGCTGTTGTGGAAAAATGGAAAGGACAGATAGAAAAGGACTTACC 1142
Query 900 CCGGACATTTCCAGGTCATCCTGCCCTAGATGATGAT-TTCAGAAATGCTCTGCGGCGAT 958
||||||||||| ||||||||||| |||||||||||| | ||||||||||| ||||| |
Sbjct 1143 TCGGACATTTCCTGGTCATCCTGCTCTAGATGATGATGGT-AGAAATGCTCTACGGCGTT 1201
Query 959 TGCTAACTGCCTATGCTAGGCATAATCCCTCTGTTGGATACTGTCAGGCAATGAATTTCT 1018
|||| ||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||
Sbjct 1202 TGCTTACTGCTTATGCTAGGCATAATCCTTCTGTAGGATACTGTCAGGCTATGAATTTCT 1261
Query 1019 TCGCTGCACTTTTATTACTTCTGATGCCCGAAGAAAATGCCTTTTGGTCGCTTATAGGAA 1078
| ||||| |||||||| ||| ||||||| |||||||||||||||||| | || ||||||
Sbjct 1262 TTGCTGCGCTTTTATTGCTTTTGATGCCAGAAGAAAATGCCTTTTGGGCACTGATAGGAC 1321
Query 1079 TCATTGATGACTACTTCCATGATTATTATTCAGAAGAGATGATCGAATCCCAGGTTGACC 1138
||||||||||||||||| ||| ||||||||||||||| ||||| || || |||||||| |
Sbjct 1322 TCATTGATGACTACTTCAATGGTTATTATTCAGAAGAAATGATAGAGTCTCAGGTTGATC 1381
Query 1139 AACGAGTTCTGGAGGAGTT-GCTTCGAGAGCGATTTCCTAAATTGGTTCATCATCTAGAT 1197
||| ||||||||||||||| | ||||||| ||||||||||||||||||||||||| |||
Sbjct 1382 AACTAGTTCTGGAGGAGTTAG-TTCGAGAAAGATTTCCTAAATTGGTTCATCATCTGGAT 1440
Query 1198 TTTCTTGGAGTCCAGGTGGCTTGTGTTACAGGGCCATGGTTTCTTTCCATCTTCATTAAT 1257
| ||||||||| || |||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1441 TATCTTGGAGTGCAAGTGGCTTGGGTTACAGGGCCATGGTTTCTTTCCATCTTCATGAAT 1500
Query 1258 ATGCTTCCATGGGAAAGTGTTCTCAGAGTGTGGGATGTGCTTCTATTTGAAGGAAATCGT 1317
||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||
Sbjct 1501 ATGCTTCCATGGGAAAGTGTTCTTAGAGTCTGGGATGTGCTTCTCTTTGAAGGAACTCGT 1560
Query 1318 GTTATGCTTTTCAGAACAGCACTCGCATTGGTGGAATTTTACGGTCCTGCATTGGTTACA 1377
|||||||||||||||||||||||||||||| ||||| | || ||||||||||| |||||
Sbjct 1561 GTTATGCTTTTCAGAACAGCACTCGCATTGATGGAACTATATGGTCCTGCATTAGTTACT 1620
Query 1378 ACCAAGGACACTGGAGATGCTGTTACTTTGTTACAGTCAATGACTGGTTCAACATTTGAT 1437
|| ||||| ||||||| |||||||||||| |||| ||| ||||||| ||||||||||||
Sbjct 1621 ACGAAGGATGCTGGAGACGCTGTTACTTTGCTACAATCACTGACTGGATCAACATTTGAT 1680
Query 1438 AGCAGCCAGCTCGTTTTCACTGCTTGCATGGGGTACCAAAGTGTACATGAAAGTAGATTG 1497
||||||||||| ||||| |||||||||||||| ||||||| ||||||||||| |||||||
Sbjct 1681 AGCAGCCAGCTAGTTTTAACTGCTTGCATGGGTTACCAAAATGTACATGAAATTAGATTG 1740
Query 1498 CAGGAACTAAGAAGCAAACACAGGCCAGCAGTAATAGCTGCATTTGAGGAAAGATTAAAG 1557
|| ||| | ||||||| || |||||||| || || |||||| |||||||||| | ||||
Sbjct 1741 CAAGAATTGCGAAGCAAGCATAGGCCAGCTGTGATCGCTGCACTTGAGGAAAGGTCAAAG 1800
Query 1558 GGGCTTCAAGCTTGGAGGGATTCAAAAGGCCCTGCGACCAAATTACATAATTCTAAGCAA 1617
||||||||||| ||||| ||||| || || | ||| |||||||| |||||| |||||||
Sbjct 1801 GGGCTTCAAGCGTGGAGAGATTCTAAGGGACTTGCCTCCAAATTATATAATTTTAAGCAA 1860
Query 1618 GACCCAAATTCTGTTTTAGC---TAGCAAAGCCTCATCGTCAAATGGGAGTTTATCTCGT 1674
|||||||| |||||||| | |||||||||||||| ||||||||||||||| |||||
Sbjct 1861 GACCCAAAATCTGTTTTGGTGGATAGCAAAGCCTCATTGTCAAATGGGAGTTTGTCTCGA 1920
Query 1675 TCTGAATCAGGATCCAGTTATGCAGACGACGTCTTTATTAGCCTGACTGGGGATGGTGAG 1734
||||| |||||||| ||| ||||||| || || || ||||||| ||||||||||| |||
Sbjct 1921 TCTGAGTCAGGATCAAGTAATGCAGATGAAGTGTTGGTTAGCCTAACTGGGGATGGGGAG 1980
Query 1735 ATAGATTGTTTTCAAGATCTTCAAG 1759
|||||| | |||||||||||||||
Sbjct 1981 GTAGATTCTGTTCAAGATCTTCAAG 2005
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112097816985
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5