BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg897601
Length=867
Score E
Sequences producing significant alignments: (Bits) Value
AT3G47560.2 | Symbols: | alpha/beta-Hydrolases superfamily pro... 920 0.0
AT1G29840.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 604 3e-172
AT3G47590.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 542 3e-153
> AT3G47560.2 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:17525486-17526978 REVERSE LENGTH=1047
Length=1047
Score = 920 bits (498), Expect = 0.0
Identities = 598/645 (93%), Gaps = 12/645 (2%)
Strand=Plus/Plus
Query 218 GAGAGAGTGAAGGCAGTTTCTGTTATGGTAACTACAATTATGAAGCTGACGATCTACATT 277
||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||
Sbjct 300 GAGAGAGTGAAGGCAGTTTCTATTATGGTAACTACAATTACGAAGCTGATGATCTACATT 359
Query 278 CTGTTATCCAATACTTCTCTAACTTGAACCGTGTGGTTACTATAATTCTTGGCCACAGTA 337
|||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||
Sbjct 360 CTGTTATCCAATACTTCTCTAACTTGAACCGTGTTGTTACTATAATTCTCGGTCACAGTA 419
Query 338 AAGGAGGTGATGTGGTCCTCCTCTATGCATCTAAGTATCACGATATCCGCAATGTAATCA 397
|||||||||||||||||||||||||||| || |||||||||||||||| |||||| ||||
Sbjct 420 AAGGAGGTGATGTGGTCCTCCTCTATGCCTCCAAGTATCACGATATCCCCAATGTGATCA 479
Query 398 ATCTCTCGGGACGTTATGATCTGAAGGAAGGCATAGGAGAACGTCTTGGTGAAAATTTTG 457
|||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 480 ATCTCTCGGGACGTTATGATCTGAAGAAAGGCATAGGAGAACGTCTTGGTGAAGATTTTT 539
Query 458 TGGAAAGAATTAAGAAACAAGGATACATCGATGTTAAAGATGGTATTGTTATCGCTCTTT 517
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TGGAAAGAATTAAGCAACAAGGATACATCGATGTTAAAGATGGTATTGTTATCGCTCTTC 599
Query 518 GGTTTTCATGCACTGTCTCAATCAGAACTCTCATGTG-T-CTATCAATGTACTGCTGGTT 575
| ||||||||||| || | ||||||||| | | ||| | ||||||||||| ||||||
Sbjct 600 GCTTTTCATGCACCGT-T--ATCAGAACT-TTA-GTGTTACTATCAATGTA---CTGGTT 651
Query 576 TGTTACAGGAGATTCTGGTTACCGTGTTACCGAGGAAAGCTTGATGGACCGGTTAAACAC 635
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 652 TGTTACAGGAGATTCTGGTTACCGTGTTACCGAGGAGAGTTTGATGGACCGGTTAAACAC 711
Query 636 AGATATGCATGAAGCTTGCCTCAAGATTGACAAAGAATGCAGGGTCTTGACTGTTCATGG 695
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 712 AGATATGCATGAAGCTTGCCTCAAGATTGACAAAGAATGCAGGGTCTTGACGGTCCATGG 771
Query 696 ATCGGCTGACGAGACAGTACCCGTGGAAGATGCAAAGGAGTTTGCAAAGATCATACCAAA 755
||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct 772 ATCGGGTGACGAGACAGTACCAGTGGAAGATGCAAAGGAGTTTGCAAAGATAATACCGAA 831
Query 756 CCACAAGCTGGAGATTGTGGAAGGAGCTGATCATTGTTATACCAAACATCAAAGTCAATT 815
|||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 832 CCACGAGCTACAGATTGTGGAAGGAGCTGATCATTGTTATACCAATTATCAAAGTCAATT 891
Query 816 AGTTTCAACAGTTATGGAGTTCATAAACACCGTCATTGTGAAGAA 860
|||| ||| ||||||||||||||||| | ||||||||||||||
Sbjct 892 GGTTTTAACGGTTATGGAGTTCATAAAGA--GTCATTGTGAAGAA 934
Score = 337 bits (182), Expect = 1e-91
Identities = 206/218 (94%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 1 ATGGATTCATCGCAGGGAAGTACACAACAGAAGATTGTGATTCCGAACAGCCACAATGAG 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2 ATGGATTCATCGCAGGGAAGTACACAACAGAAGATTGTGATTCTGAACAGCCACAATGAG 61
Query 61 AAGCTTGTGGGGATGCTTCATGAAACTGGTTCTACAGAAATTGTGGTCTTGTGTCATGGC 120
|| || ||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 62 AACCTGGTGGGTCTGCTTCATGAAACTGGTTCTACAGAAATTGTAGTCTTGTGTCATGGC 121
Query 121 TTTCGATCAAACAAGAACTTTGTAATTATGAAAAATGTGGCTGTTGCTATAGAGAAAGAA 180
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct 122 TTTCGATCAAACAAGAACTTCGAAATTATGAAAAATGTGGCTGTTGCTATAGAGAGAGAA 181
Query 181 GGGATTAGCGCTTTCCGTTTCGATTTCTCTGGGAATGG 218
|||||||| ||||||||||| |||||||| ||||||||
Sbjct 182 GGGATTAGTGCTTTCCGTTTTGATTTCTCCGGGAATGG 219
> AT1G29840.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:10445625-10447553 REVERSE LENGTH=1033
Length=1033
Score = 604 bits (327), Expect = 3e-172
Identities = 430/480 (90%), Gaps = 6/480 (1%)
Strand=Plus/Plus
Query 21 TACACAACAGAAGATTGTGATTCCGAACAGCCACAATGAGAAGCTTGTGGGGATGCTTCA 80
||||||||||||||| ||||||| ||| ||| |||| |||||||| ||||| |||||||
Sbjct 161 TACACAACAGAAGATAGTGATTCTGAATAGCAACAACGAGAAGCTAGTGGGTCTGCTTCA 220
Query 81 TGAAACTGGTTCTACAGAAATTGTGGTCTTGTGTCATGGCTTTCGATCAAACAAGAACTT 140
|||||||||||| |||||||||||||||||||| |||||||||||||||| |||||| |
Sbjct 221 TGAAACTGGTTCAACAGAAATTGTGGTCTTGTGCCATGGCTTTCGATCAACCAAGAA-TG 279
Query 141 TGTAA-TTATGAAAAATGTGGCTGTTGCTATAGAGAAAGAAGGGATTAGCGCTTTCCGTT 199
|| | ||||||||||| |||| ||||||||||||||||||||| |||||||||||||
Sbjct 280 ACCAAGTCATGAAAAATGTTGCTGCTGCTATAGAGAAAGAAGGGATCAGCGCTTTCCGTT 339
Query 200 TCGATTTCTCTGGGAATGGAGAGAGTGAAGGCAGTTTCTGTTATGGTAACTACAATTATG 259
| |||||||||||||| ||||||||| |||||||||||| || |||||||||||| ||||
Sbjct 340 TTGATTTCTCTGGGAACGGAGAGAGTAAAGGCAGTTTCTATTTTGGTAACTACAACTATG 399
Query 260 AAGCTGACGATCTACATTCTGTTATCCAATACTTCTCTAACTTGAACCGTGTGGTTACTA 319
||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||| |||
Sbjct 400 AAGCTGATGATCTACATTCTGTTATCCGATACTTCACTAACATGAACCGTGTGGTTCCTA 459
Query 320 TAATTCTTGGCCACAGTAAAGGAGGTGATGTGGTCCTCCTCTATGCATCTAAGTATCACG 379
||||| |||||||||||||||| ||||||||||||||| ||||||| || |||||||| |
Sbjct 460 TAATTATTGGCCACAGTAAAGGTGGTGATGTGGTCCTCGTCTATGCCTCGAAGTATCAAG 519
Query 380 ATATCCGCAATGTAATCAATCTCTCGGGACGTTATGATCTGAAG-GAAGGCATAGGAGAA 438
|||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 520 ATATTCGCAATGTAATCAATCTCTCGGGACGTTATGATCTGAAGAGA-GGCATAGGAGAG 578
Query 439 CGTCTTGGTGAAAATT-TTGTGGAAAGAATTAAGAAACAAGGATACATCGATGTTAAAGA 497
|||||||| ||| ||| || |||||||||| ||| ||||||||| ||||||| |||||||
Sbjct 579 CGTCTTGGGGAAGATTATT-TGGAAAGAATAAAGCAACAAGGATTCATCGATATTAAAGA 637
Score = 394 bits (213), Expect = 8e-109
Identities = 252/271 (93%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 598 CGTGTTACCGAGGAAAGCTTGATGGACCGGTTAAACACAGATATGCATGAAGCTTGCCTC 657
|||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||||
Sbjct 654 CGTGTTACCGAGGAGAGCTTAATGGAAAGGTTAAACACTGATATGCATGAAGCTTGCCTC 713
Query 658 AAGATTGACAAAGAATGCAGGGTCTTGACTGTTCATGGATCGGCTGACGAGACAGTACCC 717
||||||||||||||||||||||||||||| |||||||| |||||||||||| | |||||
Sbjct 714 AAGATTGACAAAGAATGCAGGGTCTTGACGGTTCATGGCTCGGCTGACGAGGTAATACCC 773
Query 718 GTGGAAGATGCAAAGGAGTTTGCAAAGATCATACCAAACCACAAGCTGGAGATTGTGGAA 777
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 774 CTGGAAGATGCCAAGGAGTTTGCAAAGATCATACCGAACCACAAGCTGGAGATTGTGGAA 833
Query 778 GGAGCTGATCATTGTTATACCAAACATCAAAGTCAATTAGTTTCAACA-GTTATGGAGTT 836
||||||||||||||||||||||||||||||||||||||| || ||| | |||||||||||
Sbjct 834 GGAGCTGATCATTGTTATACCAAACATCAAAGTCAATTAATTACAA-ATGTTATGGAGTT 892
Query 837 CATAAACACCGTCATTGTGAAGAACAACTAG 867
|||||| || |||||||||||||||||||||
Sbjct 893 CATAAAGACAGTCATTGTGAAGAACAACTAG 923
> AT3G47590.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:17535759-17537530 REVERSE LENGTH=1319
Length=1319
Score = 542 bits (293), Expect = 3e-153
Identities = 434/503 (86%), Gaps = 6/503 (1%)
Strand=Plus/Plus
Query 1 ATGGATTCATCGCAGGGAAGTAC-ACAACAGAAGATTGTGATTCCGAACAGCCACAATGA 59
|||||| | || |||||| | | | |||||| |||||||||||| ||||| ||||| ||
Sbjct 163 ATGGATCCGTCTAAGGGAA-TCCAAGAACAGAGGATTGTGATTCCAAACAGACACAACGA 221
Query 60 GAAGCTTGTGGGGATGCTTCATGAAACTGGTTCTACAGAAATTGTGGTCTTGTGTCATGG 119
|||||| || || ||||||||||||||||||||||||| || || |||||||| |||||
Sbjct 222 GAAGCTGGTTGGTCTGCTTCATGAAACTGGTTCTACAGACATCGTAGTCTTGTGCCATGG 281
Query 120 CTTTCGATCAAACAAGAACT-TTGTAATTATGAAAAATGTGGCTGTTGCTATAGAGAAAG 178
|||||||||||||||| | | ||| ||||| |||||||||| ||||||| ||||||
Sbjct 282 CTTTCGATCAAACAAG-AGTAACCAAATAATGAATAATGTGGCTGCTGCTATACAGAAAG 340
Query 179 AAGGGATTAGCGCTTTCCGTTTCGATTTCTCTGGGAATGGAGAGAGTGAAGGCAGTTTCT 238
||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 341 AAGGGATCAGCGCTTTTCGTTTTGATTTCTCCGGGAATGGAGAGAGTGAAGGCAGTTTCT 400
Query 239 GTTATGGTAACTACAATTATGAAGCTGACGATCTACATTCTGTTATCCAATACTTCTCTA 298
|||||||||||| || |||||||||| ||| ||||||||||| |||||||||||||||
Sbjct 401 ATTATGGTAACTATAACCATGAAGCTGATGATTTACATTCTGTTGTCCAATACTTCTCTA 460
Query 299 ACTTGAACCGTGTGGTTACTATAATTCTTGGCCACAGTAAAGGAGGTGATGTGGTCCTCC 358
|| ||||||||||||| ||||||| || || |||||||| ||||||||||| |||||||
Sbjct 461 ACAAGAACCGTGTGGTTCCTATAATCCTCGGTCACAGTAAGGGAGGTGATGTTGTCCTCC 520
Query 359 TCTATGCATCTAAGTATCACGATATCCGCAATGTAATCAATCTCTCGGGACGTTATGATC 418
|||| || || |||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 521 TCTACGCCTCCAAGTATCATGATGTCCGCAATGTAATCAATCTCTCGGGACGTTATGATC 580
Query 419 TGAAGGAAGGC-ATAGGAGAACGTCTTGGTGAAAATTTTGTGGAAAGAATTAAGAAACAA 477
| || |||| ||| |||| |||||||| ||| ||||| |||||||||||||| |||||
Sbjct 581 TTAAA-AAGGGTATAAGAGAGCGTCTTGGAGAAGATTTTTTGGAAAGAATTAAGCAACAA 639
Query 478 GGATACATCGATGTTAAAGATGG 500
|||| |||||||||| ||||||
Sbjct 640 GGATTCATCGATGTTGGAGATGG 662
Score = 355 bits (192), Expect = 4e-97
Identities = 245/271 (90%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 598 CGTGTTACCGAGGAA-AGCTTGATGGACCGGTTAAACACAGATATGCATGAAGCTTGCCT 656
|||||||| || ||| ||||| |||||| |||||| ||| ||||| ||||||||||||||
Sbjct 676 CGTGTTACTGA-GAAGAGCTTAATGGACAGGTTAAGCACTGATATTCATGAAGCTTGCCT 734
Query 657 CAAGATTGACAAAGAATGCAGGGTCTTGACTGTTCATGGATCGGCTGACGAGACAGTACC 716
||||||||||||||| |||||||||||||| ||||||||||||| |||||| | ||||
Sbjct 735 CAAGATTGACAAAGAGTGCAGGGTCTTGACGGTTCATGGATCGGAGGACGAGGTAATACC 794
Query 717 CGTGGAAGATGCAAAGGAGTTTGCAAAGATCATACCAAACCACAAGCTGGAGATTGTGGA 776
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 795 TGTGGAAGATGCGAAGGAGTTTGCGAAGATCATACCAAACCACAAGCTGGAGATTGTGGA 854
Query 777 AGGAGCTGATCATTGTTATACCAAACATCAAAGTCAATTAGTTTCAACAGTTATGGAGTT 836
||||||| ||||| ||||||| | || ||||||||||||||||||||||||||||||||
Sbjct 855 AGGAGCTAATCATGGTTATACTGAGCACCAAAGTCAATTAGTTTCAACAGTTATGGAGTT 914
Query 837 CATAAACACCGTCATTGTGAAGAACAACTAG 867
|||||| || |||||||||||||||||||||
Sbjct 915 CATAAAGACAGTCATTGTGAAGAACAACTAG 945
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 42297151774
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5