BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg897842 Length=921 Score E Sequences producing significant alignments: (Bits) Value AT3G49690.1 | Symbols: RAX3, MYB84, ATMYB84 | myb domain protei... 1402 0.0 AT5G65790.1 | Symbols: ATMYB68, MYB68 | myb domain protein 68 |... 532 2e-150 > AT3G49690.1 | Symbols: RAX3, MYB84, ATMYB84 | myb domain protein 84 | chr3:18427735-18429201 FORWARD LENGTH=1240 Length=1240 Score = 1402 bits (759), Expect = 0.0 Identities = 880/936 (94%), Gaps = 18/936 (2%) Strand=Plus/Plus Query 1 ATGGGAAGAGCACCGTGTTGTGACAAAGCAAACGTGAAGAAAGGGCCTTGGTCTCCTGAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207 ATGGGAAGAGCACCGTGTTGTGACAAAGCAAACGTGAAGAAAGGGCCTTGGTCTCCTGAG 266 Query 61 GAAGATGCAAAACTCAAATCTTACATTGAAAAGAGTGGAACAGGAGGCAATTGGATCGCT 120 |||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||| Sbjct 267 GAAGATGCAAAACTCAAATCTTACATTGAAAATAGTGGCACCGGAGGCAATTGGATCGCT 326 Query 121 TTGCCTCAGAAGATTGGTTTAAAGAGATGTGGGAAGAGTTGCAGGCTGAGGTGGCTTAAC 180 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 327 TTGCCTCAAAAGATTGGTTTAAAGAGATGTGGAAAGAGTTGCAGGCTGAGGTGGCTTAAC 386 Query 181 TATCTGAGACCAAACATCAAACATGGTGGCTTCTCTGAGGAAGAAGAAAACATCATTTGT 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 387 TATCTTAGACCAAACATCAAACATGGTGGCTTCTCTGAGGAAGAAGAAAACATCATTTGT 446 Query 241 AGCCTCTATCTTACTATTGGTAGCAGGTGGTCTATAATCGCTGCTCAATTGCCGGGACGA 300 ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 447 AGCCTTTACCTTACAATTGGTAGCAGGTGGTCTATAATCGCTGCTCAATTGCCGGGACGA 506 Query 301 ACAGACAACGATATAAAAAACTATTGGAACACTAGGCTCAAGAAGAAACTTATTAACAAA 360 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 507 ACAGACAACGATATAAAAAACTATTGGAACACGAGGCTCAAGAAGAAACTCATTAACAAA 566 Query 361 CAACGCAAGGAGCTCCAAGAAGCTTGTATGGAGCAGCAAGAGATGATGGTGATGATGAAG 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 567 CAACGCAAGGAGCTTCAAGAAGCTTGTATGGAGCAGCAAGAGATGATGGTGATGATGAAG 626 Query 421 AGacaacaacaacaacaacaaATCCAAACTTCTTTCATGATGAGACAAGACCAAACAATG 480 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 627 AGACAACACCAACAACAACAAATCCAAACTTCTTTTATGATGAGACAAGACCAAACAATG 686 Query 481 TTCACATGGCCACTACAACATCATCATGATCAGGTACCAACACTTTTCATGGATAAAACC 540 ||||||||||||||||| |||||| ||| ||| || ||| | ||||||||| || ||||| Sbjct 687 TTCACATGGCCACTACATCATCATAATGTTCAAGTTCCAGCTCTTTTCATGAATCAAACC 746 Query 541 AACTCGTTTTGCGACCAAGAAGATGCTAAGCCAGTG---ATCAAGATC--G---AAGATC 592 ||||||||||||||||||||||||| |||||||||| ||||||| | | |||||| Sbjct 747 AACTCGTTTTGCGACCAAGAAGATGTTAAGCCAGTGCTCATCAAGAACATGGTCAAGATC 806 Query 593 -A-G-----GAACTGGAGAGAACAAACCCTCATCATCATCAAGATTCGATGACAAACGCT 645 | | |||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 807 GAAGATCAAGAACTGGAGAAAACAAACCCTCATCATCATCAAGATTCAATGACAAACGCT 866 Query 646 TTTGATCATCTCTCTTTCTCTCAACTCTTGTTAGATCCTAATCATAACCACTTAGGATCA 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 867 TTTGATCATCTCTCTTTCTCTCAACTCTTGTTAGATCCTAATCATAACCACTTAGGATCA 926 Query 706 GGAGAGGGTTTCTCCATGACCTCGATCTTGAGCGCCAACGCAAACCCTCCATTGCTTAAC 765 || |||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||| Sbjct 927 GGCGAGGGTTTCTCCATGAACTCTATCTTGAGCGCCAACACAAACTCTCCATTGCTTAAT 986 Query 766 ACAAGTATTAATGATCATCAGTGGTTCGGGAATTTCCAGGCCGAAACCATCAACTTGTTC 825 ||||||| | |||| |||||||||||||||||||||||||||||||| | ||||||||| Sbjct 987 ACAAGTA--A-TGATAATCAGTGGTTCGGGAATTTCCAGGCCGAAACCGTAAACTTGTTC 1043 Query 826 TCAGGAGCCTCCACAAGTACTTCGGCAGATCAAAGCACCATAAGTTGGGAAGACATAAGC 885 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1044 TCAGGAGCCTCCACAAGTACTTCGGCAGATCAAAGCACTATAAGTTGGGAAGACATAAGC 1103 Query 886 TCTCTTGTTTATTCTGATTCAAAGCAATTTTGTTAA 921 ||||||||||||||||||||||||||||||| |||| Sbjct 1104 TCTCTTGTTTATTCTGATTCAAAGCAATTTTTTTAA 1139 > AT5G65790.1 | Symbols: ATMYB68, MYB68 | myb domain protein 68 | chr5:26322948-26324578 FORWARD LENGTH=1405 Length=1405 Score = 532 bits (288), Expect = 2e-150 Identities = 385/432 (89%), Gaps = 6/432 (1%) Strand=Plus/Plus Query 1 ATGGGAAGAGCACCGTGTTGTGACAAAGCAAACGTGAAGAAAGGGCCTTGGTCTCCTGAG 60 ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct 88 ATGGGAAGAGCACCGTGTTGTGATAAGGCCAACGTGAAGAAAGGGCCTTGGTCTCCTGAG 147 Query 61 GAAGATGCAAAACTCAAATCTTACATTGAAAAGAGTGGAACAGGAGGCAATTGGATCGCT 120 ||||| || ||||||||| |||||| || || ||||| ||||||||||| ||||| ||| Sbjct 148 GAAGACGCCAAACTCAAAGATTACATCGAGAATAGTGGCACAGGAGGCAACTGGATTGCT 207 Query 121 TTGCCTCAGAAGATTGGTTTAAAGAGATGTGGGAAGAGTTGCAGGCTGAGGTGGCTTAAC 180 ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| ||| Sbjct 208 TTGCCTCAGAAAATTGGTTTAAGGAGATGTGGGAAGAGTTGCAGGCTAAGGTGGCTCAAC 267 Query 181 TATCTGAGACCAAACATCAAACATGGTGGCTTCTCTGAGGAAGAAGAAAACATCATTTGT 240 ||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 268 TATTTGAGACCAAACATCAAACATGGTGGCTTCTCCGAGGAAGAAGACAACATCATTTGT 327 Query 241 AGCCTCTATCTTACTATTGGTAGCAGGTGGTCTATAATCGCTGCTCAATTGCCGGGACGA 300 | ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||| || Sbjct 328 AACCTCTATGTTACTATTGGTAGCAGGTGGTCTATAATTGCTGCACAATTGCCGGGAAGA 387 Query 301 ACAGACAACGATATAAAAAACTATTGGAACACTAGGCTCAAGAAGAAACTTATTAACAAA 360 || ||||||||||| ||||||||||||||||| ||||| |||||||| ||| | |||||| Sbjct 388 ACCGACAACGATATCAAAAACTATTGGAACACGAGGCTGAAGAAGAAGCTTCTGAACAAA 447 Query 361 CAACGCAAGGAGCTCCAAGAAGCTTGTATGGAGCAGCAAGAGATGATGGTGATGATGAAG 420 ||| | || ||| |||||||||| | ||| | ||||||||||| | |||||||||| Sbjct 448 CAAAGGAAAGAGTTCCAAGAAGCGCGAATG-A--AGCAAGAGATG--G-TGATGATGAAA 501 Query 421 AGacaacaacaa 432 || ||||||||| Sbjct 502 AGGCAACAACAA 513 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45009795712 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5