BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg898105
Length=1494
Score E
Sequences producing significant alignments: (Bits) Value
AT3G52020.1 | Symbols: scpl39 | serine carboxypeptidase-like 39... 1834 0.0
AT3G56540.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 913 0.0
> AT3G52020.1 | Symbols: scpl39 | serine carboxypeptidase-like
39 | chr3:19299309-19301076 FORWARD LENGTH=1506
Length=1506
Score = 1834 bits (993), Expect = 0.0
Identities = 1352/1521 (89%), Gaps = 42/1521 (3%)
Strand=Plus/Plus
Query 1 ATGGGAAAACTACAAGATTGGTCTGTAACCACTTGTCTCTTCCTTTTCTTATTTCAAGCA 60
|||||| |||||||||| ||||| ||||||||||||||| ||||||| || ||||||||
Sbjct 1 ATGGGAGAACTACAAGACTGGTCGGTAACCACTTGTCTCCTCCTTTTATTGTTTCAAGCG 60
Query 61 TTACAAATCCGTTGCACAAGCCAAACACATGTTCTAAGCCGTC---TGAACCGCTCGAAG 117
| |||||||| |||||| ||||||||||||||| ||| ||||| || |||||||||||
Sbjct 61 TCACAAATCCATTGCACGAGCCAAACACATGTTTTAAACCGTCTTTTGTACCGCTCGAAG 120
Query 118 CGAGGGATTGGTTCGTCGGTTGACACAAACCACTTAAATGTGATTCGTCGCTTAAGCGTG 177
|||||| ||||||||||||||||||| ||||| ||||||| || |||| ||||||||||
Sbjct 121 CGAGGGTTTGGTTCGTCGGTTGACACGAACCATTTAAATGCCATCCGTCACTTAAGCGTG 180
Query 178 TCTTCGCCCCTAAACACAAGCGGTGTTAACCAACAAGAGCAAAGGGAGAGAGATCTAATC 237
||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 181 TCTTCACCCCAAAACACCAGCGGTGTTAACCAACAAGAGCAAAAGGAGAGAGATCTAATT 240
Query 238 GAGAATCTGCCTGGACAACCTTCAGTTAGTTTTAGACAATATGGCGGTTATGTGACCGTG 297
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GAGAATCTGCCCGGACAGCCTTCAGTTAGTTTTAGACAATATGGCGGTTATGTGACCGTG 300
Query 298 AATGAGTCAGCAGGTCGATCCTTGTACTATTATTTCGTGGAAGCCACCGAAAAC-AAAAA 356
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 301 AATGAGTCAGCAGGTCGATCCTTGTACTATTATTTCGTGGAAGCCACC-AAAACCAAAAA 359
Query 357 GTCGTCACCCCTTGTTCTATGGCTAAACGGAGGACCTGGCTGCTCCTCCCTATATGGGGC 416
||| | ||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 360 GTCTTTACCCCTTGTTCTATGGCTAAACGGAGGACCTGGTTGTTCCTCCCTATATGGGGC 419
Query 417 ATTTCAAGAACTTGGCCCATTCCGCACACATAGCGACGGCAAAACACTCTATACCAATCC 476
||||||||| ||||| |||||||||| | || ||||||||||||||||||||||||||||
Sbjct 420 ATTTCAAGAGCTTGGTCCATTCCGCATATATGGCGACGGCAAAACACTCTATACCAATCC 479
Query 477 TTATTCATGGAACAAATTGGCGAACATATTATTTTTAGAATCTCCAGCAGGAACGGGATT 536
||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 480 TTATTCATGGAACAACGTGGCGAACATATTATTCTTAGAATCTCCAGTAGGAACGGGATT 539
Query 537 CTCGTATACGAACACA-ACGACGGATTTGGAGAATCCCGGGGACATGAATA-CAGCAGCT 594
|||||| ||||||||| | | |||||||||||||||||||||||||||| | ||||||||
Sbjct 540 CTCGTACACGAACACAGA-GTCGGATTTGGAGAATCCCGGGGACATGAA-AGCAGCAGCT 597
Query 595 GATAACTACATCTTCTTGGTGAAATGGCTGGAGAGGTTTCCGGAATACAAAGGAAGAGAA 654
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 598 GATAAATACATCTTCTTGGTGAAATGGCTGGAGAGGTTTCCGGAATATAAAGGAAGAGAA 657
Query 655 TTTTACATCGCTGGTGAGAGTTACGCCGGGCACTATGTTCCACAACTCGCACAAACCATC 714
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 TTTTACATTGCTGGTGAGAGTTACGCCGGGCACTATGTTCCACAACTCGCACAAACCATC 717
Query 715 CTTGTCCATAACAAGAACCAAACCTTCATCAACCTACGTGGCATTTTGATTGGTAACCCG 774
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 718 CTTGTTCATAACAAGAACCAAAACTTCATCAACCTACGTGGCATTTTGATTGGTAACCCG 777
Query 775 AGTCTGGACGACACCGCCGAA-CTAATGGGTGCAAACGAGTT-TTTGGTAAGCCATGCTT 832
| |||| |||||| | |||| | || |||| | || || ||| |||||||||||||
Sbjct 778 ACTCTGAACGACATAGTCGAAAC-AACGGGTTCGTTTGA-TTATTTAGTAAGCCATGCTT 835
Query 833 TACTCTCACAAGAAACAT-TCCTTAGCTTCGAGAAAAACTGCGCC-CATAACCCTCCAAC 890
||||||||||||| | | ||||||||| | || |||||||||| | | || ||||||
Sbjct 836 TACTCTCACAAGATAG-TCTCCTTAGCTACAAGGAAAACTGCGCAAC-TGACACTCCAAA 893
Query 891 --TGGTGAGGTTGATTGCGTCG-AGTTGAGTATGAAAATCCAGGACGACATAGGAAAAAT 947
||| |||| |||||| ||| | ||||||||||||||| | ||||||||| ||||||
Sbjct 894 AATGG--AGGTGGATTGCATCGCA-TTGAGTATGAAAATCGACGACGACATAAAAAAAAT 950
Query 948 AAACCTATACAACATATTAACTCCTACGTGCCTAAACCCCACGTCGA--------A-TAA 998
||||||||||||||||| |||||||||||| ||||| |||||| || | |||
Sbjct 951 GAACCTATACAACATATTGACTCCTACGTGCATAAACGCCACGTTGACCCCGTTGACTAA 1010
Query 999 CCAATCCAAAGAATGCACAACGGTGATGCAATATGATGCGTGCGGAATGCAGCACATAG- 1057
|||||||||||||||||| || ||| |||| ||||| ||||||||||||| ||||||
Sbjct 1011 CCAATCCAAAGAATGCACCACTGTGCTGCAGTATGAACCGTGCGGAATGCAATACATAGC 1070
Query 1058 ATGCTTACTTTAACCAGGGC-GAGGTTCAGCGTTCGATGCACGTCACAAAAGTGCCATAC 1116
| |||||||| |||| ||| || ||||||||||| ||||||||||| ||| |||| ||
Sbjct 1071 A-GCTTACTTAAACC-GGGAAGACGTTCAGCGTTCCATGCACGTCACGAAATTGCCGCAC 1128
Query 1117 ACGTGGAAGCTATGTAATGAAGACCTC-GGATTTAATTGGAGTCAGACCGATGCAT-CTG 1174
||||||| |||||||||||||| || | ||||| ||||||| ||||| ||| || |||
Sbjct 1129 ACGTGGATGCTATGTAATGAAG-CCACAGGATTCAATTGGAACCAGACGGATT-ATTCTG 1186
Query 1175 CATCGATGCTACCTATTCTCAAAGAGCTGATGAAACATGAGCAACTGCGAGTTTGGGTGT 1234
|||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 1187 CATCGATGCTACCTATTCTCAAAGAGCTGATGAAACATGATCAACTTCGAGTCTGGGTGT 1246
Query 1235 ACACTGGAGACACGGATACAGTGATTCCGATAACGGTTACAATGTACGCTCTGAAGATGA 1294
||||||| ||||||||||| ||||||||| | || ||||||||| |||||||||||||||
Sbjct 1247 ACACTGGCGACACGGATACGGTGATTCCGTTGACAGTTACAATGCACGCTCTGAAGATGA 1306
Query 1295 TGAATCTAACAGCTGTTACGGACTGGCTCCCGTGGTTTAGCGAAGGGCAGGTGGGTGGTT 1354
|||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||| ||||
Sbjct 1307 TGAATCTAACGGCTGTTACGGACTGGCTTCCGTGGTTTAGTGAAGGACAGGTGGGAGGTT 1366
Query 1355 TCACAGAGGAATACAAAGGCAATTTTAGGTATGCCACAGTGAAAGGAGCTGGTCATGAAG 1414
|||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||
Sbjct 1367 TCACAGAGGAATACAAAGGCAATTTTAGATACGCCACAGTGATAGGAGCTGGTCATGAAG 1426
Query 1415 TTCCTCTTTACAAACCTAATGTTGCTTTTACTCTCTTTAAACAGTTTT-TACTTAATTCT 1473
||||||||||||||||||| | |||| ||||||| |||||||| |||| | | || |||
Sbjct 1427 TTCCTCTTTACAAACCTAAGGCTGCTCTTACTCTTTTTAAACA-TTTTATCCGCAACTCT 1485
Query 1474 CCTCTCCCTCTTACCCCTTGA 1494
|||||||||||||||||||||
Sbjct 1486 CCTCTCCCTCTTACCCCTTGA 1506
> AT3G56540.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:20950823-20951892 FORWARD LENGTH=795
Length=795
Score = 913 bits (494), Expect = 0.0
Identities = 634/701 (90%), Gaps = 11/701 (2%)
Strand=Plus/Plus
Query 1 ATGGGAAAACTACAAGATTGGTCTGTAACCACTTGTCTCTTCCTTTTCTTATTT-CAAGC 59
||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| || ||
Sbjct 1 ATGGGAAAACTACAAGACTGGTCTATAACCACTTGTCTCTTCCTTTTCTT-TTTGCATGC 59
Query 60 ATTACAAATCCGTTGCACAAGCCAAACACATGTTCTAAGCCGTCTGA-ACCGCTCGAAGC 118
|| ||||| || |||||| |||||| |||||||| || |||||| | |||| || ||||
Sbjct 60 ATCACAAACCCATTGCACCAGCCAATCACATGTTAGAAACCGTCT-ATACCGATCAAAGC 118
Query 119 GAGGGATTGGTTCGTCGGTTGACACAAACCACTTAAATGTGATTCGTCGCTTAAGCGTGT 178
|||||||||||||||| | ||||||| ||||||||||| ||||||||| ||||||||||
Sbjct 119 GAGGGATTGGTTCGTCAATAGACACAAGCCACTTAAATGCGATTCGTCGTTTAAGCGTGT 178
Query 179 C--T-TCGCCCCTAAACACAAGCGGTGTTAACCAACAAGAGCAAAGGGAGAGAGATCTAA 235
| | |||| || ||||| |||||||||||||||||||||||||| ||| ||||||||||
Sbjct 179 CTTTGTCGCTCCAAAACATAAGCGGTGTTAACCAACAAGAGCAAAAGGAAAGAGATCTAA 238
Query 236 TCGAGAATCTGCCTGGACAACCTTCAGTTAGTTTT-AGACAATATGGCGGTTATGTGACC 294
| |||||||| || ||||| |||||||||| |||| || |||||||||||||||||||||
Sbjct 239 TTGAGAATCTTCCCGGACAGCCTTCAGTTAATTTTAAG-CAATATGGCGGTTATGTGACC 297
Query 295 GTGAATGAGTCAGCAGGTCGATCCTTGTACTATTATTTCGTGGAAGCCACCGAAAAC-AA 353
||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct 298 GTGAATGAGTCAGCAGGTCGATCCTTGTACTATTATTTCGTGGAAGCCACC-AATACCAA 356
Query 354 AAAGTCGTCACCCCTTGTTCTATGGCTAAACGGAGGACCTGGCTGCTCCTCCCTATATGG 413
||| || |||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct 357 AAACTCATCACCCCTTGTTCTATGGCTAAACGGAGGACCGGGCTGCTCCTCTCTGTATGG 416
Query 414 GGCATTTCAAGAACTTGGCCCATTCCGCACACATAGCGACGGCAAAACACTCTATACCAA 473
|||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||
Sbjct 417 GGCATTTCAAGAGCTTGGTCCATTCCGCGTACATAGCGACAACAAAACACTCTATACCAA 476
Query 474 TCCTTATTCATGGAACAAATTGGCGAACATATTATTTTTAGAATCTCCAGCAGGAACGGG 533
|||||||||||||||||| |||||||||| ||||| ||||||||||| |||||||||||
Sbjct 477 TCCTTATTCATGGAACAACGTGGCGAACATGTTATTCTTAGAATCTCCGGCAGGAACGGG 536
Query 534 ATTCTCGTATACGAACACAACGACGGATTTGGAGAATCCCGGGGACATGAATACAGCAGC 593
|||||| || ||||||||||| |||||| |||||||||||||||||||||| ||||||||
Sbjct 537 ATTCTCATACACGAACACAACAACGGATATGGAGAATCCCGGGGACATGAAAACAGCAGC 596
Query 594 TGATAACTACATCTTCTTGGTGAAATGGCTGGAGAGGTTTCCGGAATACAAAGGAAGAGA 653
|||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 597 TGATAACTACGTTTTCTTGGTGAAATGGCTGGAGAGGTTTCCGGAATATAAAGGAAGAGA 656
Query 654 ATTTTACATCGCTGGTGAGAGTTACGCCGGGCACTATGTTC 694
||||||||||||||||||||||||||||| ||||||||||
Sbjct 657 TTTTTACATCGCTGGTGAGAGTTACGCCGGTCACTATGTTC 697
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73694400060
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5