BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg898141 Length=360 Score E Sequences producing significant alignments: (Bits) Value AT1G02430.1 | Symbols: ATARFD1B, ARFD1B | ADP-ribosylation fact... 483 6e-136 AT1G02440.1 | Symbols: ATARFD1A, ARFD1A | ADP-ribosylation fact... 460 3e-129 > AT1G02430.1 | Symbols: ATARFD1B, ARFD1B | ADP-ribosylation factor D1B | chr1:495050-496062 REVERSE LENGTH=698 Length=698 Score = 483 bits (261), Expect = 6e-136 Identities = 300/319 (94%), Gaps = 2/319 (1%) Strand=Plus/Plus Query 43 CAAGAAATAGCAGGGCTTGTGTTTGTAGTCGATAGCACGGATAGAGATCGAATAGAAGAG 102 ||||||||||| ||||||||| |||||||||||||||| || ||||||||||||||||| Sbjct 256 CAAGAAATAGCGGGGCTTGTGCTTGTAGTCGATAGCACAGACAGAGATCGAATAGAAGAT 315 Query 103 GCCAAATATTTTCTTAACATGGTGATTGATGAGATACAAGGGAGTGTCCCGGACAATGTG 162 || ||| |||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 316 GCGAAAGATTTTCTTAATGCGGTGATTGATGAGATACAAGGGAGTGTACCGGACAATGTG 375 Query 163 GCTGTTCTTGTATATGGAAACAAGCATCAAGTTCCTGGTGCTATGTCTGCTTCTGAGATC 222 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 376 GCTGTTCTTGTATTTGGAAACAAGCATGAAGTTCCTGGTGCTATGTCTGCTTCTGAGATC 435 Query 223 AGTAACAAGCTTGATCTCACTTCTCTTCGTAC-TAAAAATTGGCAGAGAAACTGGCATGT 281 |||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct 436 AGTAACAAGCTTGATCTCACTTCTCTTCGT-CAAAAAAACTGGCAGAGAAACTGGCATGT 494 Query 282 CCAGAGCTCATGTGCATTCTGTGGTGATGGTTTACATGAAGGACTCGACTGGCTGTTGAA 341 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 495 CCAGAGCTCATGTGCATTCTCTGGTGATGGTTTACATGAAGGACTCGACTGGCTGTTGAA 554 Query 342 AAATGCTGAAAGAATTTAA 360 ||||||||||||||| ||| Sbjct 555 AAATGCTGAAAGAATGTAA 573 > AT1G02440.1 | Symbols: ATARFD1A, ARFD1A | ADP-ribosylation factor D1A | chr1:496586-497479 REVERSE LENGTH=573 Length=573 Score = 460 bits (249), Expect = 3e-129 Identities = 295/318 (93%), Gaps = 0/318 (0%) Strand=Plus/Plus Query 43 CAAGAAATAGCAGGGCTTGTGTTTGTAGTCGATAGCACGGATAGAGATCGAATAGAAGAG 102 ||||||||||| ||||||||| |||||||||| ||||||| ||||||| |||||||||| Sbjct 256 CAAGAAATAGCGGGGCTTGTGCTTGTAGTCGACAGCACGGGCAGAGATCAAATAGAAGAG 315 Query 103 GCCAAATATTTTCTTAACATGGTGATTGATGAGATACAAGGGAGTGTCCCGGACAATGTG 162 | ||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||| | Sbjct 316 ACGAAAGATTTTCTTAACGTGGTGATCGATGAGATACAAGGGAGTGTACCGGACAATGCG 375 Query 163 GCTGTTCTTGTATATGGAAACAAGCATCAAGTTCCTGGTGCTATGTCTGCTTCTGAGATC 222 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 376 CCTGTTCTTGTATATGGAAACAAGCATGAAGTTCCTGGTGCTATGTCTGCTTCTGAGATC 435 Query 223 AGTAACAAGCTTGATCTCACTTCTCTTCGTACTAAAAATTGGCAGAGAAACTGGCATGTC 282 ||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||| Sbjct 436 AGTAACAAGCTAGATCTCACTAGTCTTCGTAAAAAAAACTGGCAGAGAAACTGGCATGTC 495 Query 283 CAGAGCTCATGTGCATTCTGTGGTGATGGTTTACATGAAGGACTCGACTGGCTGTTGAAA 342 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 496 CAGAGCTCATGTGCATTCTCTGGTGATGGTTTACATGAAGGACTCGACTGGCTGTTGAAA 555 Query 343 AATGCTGAAAGAATTTAA 360 |||||||||||||| ||| Sbjct 556 AATGCTGAAAGAATGTAA 573 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16889963664 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5