BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg898422 Length=609 Score E Sequences producing significant alignments: (Bits) Value AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-rela... 1020 0.0 > AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-related small GTP-binding family protein | chr3:20318412-20321001 FORWARD LENGTH=1013 Length=1013 Score = 1020 bits (552), Expect = 0.0 Identities = 590/609 (97%), Gaps = 0/609 (0%) Strand=Plus/Plus Query 1 ATGGGATGTGCTACTTCTCTTCCAGATAGGAACTCTGGAGCTTTAAGTGGTCTTAGCAAT 60 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 186 ATGGGATGTGCTTCTTCTCTTCCAGATAGGAACTCTGGAACTTTAAGTGGTCTTAGCAAT 245 Query 61 TCAGAGAATGCTGTTCCAGCTGATGCTAAAAATCTACGTGTGAAGTTAGTTCTATTAGGA 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 246 TCAGAGAATGCTGTTCCAGCTGATGCCAAAAATCTACGTGTGAAGTTAGTTCTATTAGGA 305 Query 121 GATTCTGGTGTTGGTAAAAGCTGTATTGTCCTTCGATTTGTTCGTGGTCAGTTTGACGCT 180 || ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 306 GACTCTGGTGTTGGTAAAAGTTGTATTGTCCTTCGATTTGTACGTGGTCAGTTTGACGCT 365 Query 181 ACATCTAAGGTAACTGTTGGAGCCTCGTTCTTGTCCCAAACAATAGCATTGCAAGACTCT 240 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 366 ACATCTAAGGTAACTGTTGGAGCCTCGTTCTTGTCCCAAACTATAGCATTGCAAGACTCT 425 Query 241 ACCACAGTGAAGTTTGAAATATGGGATACAGCAGGACAAGAGAGGTATTCTGCTCTTGCA 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 426 ACCACAGTGAAGTTTGAAATATGGGATACAGCAGGACAGGAGAGGTATTCTGCTCTTGCA 485 Query 301 CCACTATACTACCGTGGAGCTGGAGTTGCTGTTATTGTGTATGATATAACAAGTCCTGAA 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 486 CCACTATACTACCGTGGAGCTGGAGTTGCTGTTATTGTGTATGATATAACAAGCCCTGAA 545 Query 361 TCGTTCAAGAAAGCTCAGTATTGGGTTAAGGAACTGCAAAAGCATGGAAGCCCAGATATT 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 546 TCGTTCAAGAAAGCACAGTATTGGGTTAAGGAACTGCAAAAGCATGGAAGCCCAGATATT 605 Query 421 GTTATGGCTCTGGTTGGTAACAAAGCTGATCTACATGAGAAAAGAGAAGTACCAACCGAG 480 |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct 606 GTTATGGCTCTGGTTGGTAACAAAGCTGATCTACATGAAAAAAGAGAAGTACCTACTGAG 665 Query 481 GATGGGATAGAGCTTGCAGAGAAGAACGGCATGTTCTTTATTGAGACGTCAGCCAAAACA 540 ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 666 GATGGAATGGAGCTTGCAGAGAAGAACGGCATGTTCTTCATTGAGACGTCAGCCAAGACA 725 Query 541 GCCGATAACATAAATCAACTGTTTGAGGAAATCGGCAAGAGGCTACCTCGTCCTGCTCCT 600 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 726 GCCGATAACATAAATCAACTGTTTGAGGAAATTGGCAAGAGGCTACCTCGTCCTGCTCCT 785 Query 601 GCGTCATGA 609 |||||||| Sbjct 786 TCGTCATGA 794 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29336741848 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5