BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg898581 Length=450 Score E Sequences producing significant alignments: (Bits) Value AT3G56380.1 | Symbols: ARR17, RR17 | response regulator 17 | ch... 638 0.0 > AT3G56380.1 | Symbols: ARR17, RR17 | response regulator 17 | chr3:20905480-20906368 FORWARD LENGTH=462 Length=462 Score = 638 bits (345), Expect = 0.0 Identities = 426/463 (92%), Gaps = 14/463 (3%) Strand=Plus/Plus Query 1 ATGAATAACGGATGTGGAAGTGGAAGTGAGTCTTGTTTATCGTCAATGGAGGAGGAGCTT 60 |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 ATGAATAAGGGCTGTGGAAGTGGAAGTGATTCTTGTTTATCGTCAATGGAGGAGGAGCTT 60 Query 61 CATGTTTTAGCAGTAGATGATAATCTAATTGACCGTAAA-TTCCTTGAAAGAATCCTCAA 119 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||| Sbjct 61 CATGTTTTAGCAGTAGATGATAATCTAATTGACCGTAAACTT-GTTGAGAGAATCCTCAA 119 Query 120 GATCTCTTCTTGCAAAGTGACAACAGCAGAAAATGGGCTTAGAGCATTGGAGTACTTAGG 179 |||||||||||||||||||||||| |||||||| ||||||||||| || || || ||||| Sbjct 120 GATCTCTTCTTGCAAAGTGACAACTGCAGAAAACGGGCTTAGAGCTTTAGAATATTTAGG 179 Query 180 CTTGGGAGATCCACAAC--A--GA--C-----C-AATGTAATGAAGGTGAATCTTATCAT 227 ||||||||||||||||| | || | | |||||||||||||||||||| ||||| Sbjct 180 CTTGGGAGATCCACAACAGACTGATTCATTGACTAATGTAATGAAGGTGAATCTCATCAT 239 Query 228 CACTGATTATTGTATGCCAGGAATGACAGGTTTTGAGCTTCTGAAGAAAGTGAAGGAATC 287 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 240 CACTGATTATTGTATGCCAGGAATGACAGGTTTTGAGCTGCTTAAGAAAGTGAAGGAATC 299 Query 288 ATCGAATCTAAAGGAAGTACCTGTTGTGATATTGTCTTCAGAGAACATTCCTACTCGCAT 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 300 ATCGAATCTAAAGGAAGTACCTGTTGTGATATTGTCTTCAGAGAACATTCCTACCCGCAT 359 Query 348 CAACAAATGCTTAGCTAGCGGTGCACAGATGTTTATGCAGAAGCCACTGAAATTATCTGA 407 ||||||||| ||||| || || |||||||||||||||||||||||||||||| ||||||| Sbjct 360 CAACAAATGTTTAGCGAGTGGAGCACAGATGTTTATGCAGAAGCCACTGAAACTATCTGA 419 Query 408 TGTTGAGAAACTGAAATGTCATCTTTTAAACTGCAGAAGCTGA 450 ||| |||||||||||||| ||||||||||| |||||||||||| Sbjct 420 TGTAGAGAAACTGAAATGCCATCTTTTAAATTGCAGAAGCTGA 462 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21414061074 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5