BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg898595
Length=1500
Score E
Sequences producing significant alignments: (Bits) Value
AT3G52020.1 | Symbols: scpl39 | serine carboxypeptidase-like 39... 1607 0.0
AT3G56540.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1105 0.0
> AT3G52020.1 | Symbols: scpl39 | serine carboxypeptidase-like
39 | chr3:19299309-19301076 FORWARD LENGTH=1506
Length=1506
Score = 1607 bits (870), Expect = 0.0
Identities = 1321/1532 (86%), Gaps = 58/1532 (4%)
Strand=Plus/Plus
Query 1 ATGGGAAAACTACAAGACCGGTCTATAACCACTTGTCTCTTCCTTTTCTT-TTTGCAGGC 59
|||||| ||||||||||| |||| |||||||||||||| ||||||| || ||| || ||
Sbjct 1 ATGGGAGAACTACAAGACTGGTCGGTAACCACTTGTCTCCTCCTTTTATTGTTT-CAAGC 59
Query 60 ATCACAAATCCATTGCACCAGCCAATCACATGTTCGAAACCG-C--CTATACCGATCAAA 116
||||||||||||||||| |||||| |||||||| |||||| | | ||||| || ||
Sbjct 60 GTCACAAATCCATTGCACGAGCCAAACACATGTTTTAAACCGTCTTTTGTACCGCTCGAA 119
Query 117 GCGAGGGATTGATTCGTCAATAGACAC-AAGCCACTTAAATGCGATTCGTCACTTAAGCG 175
||||||| ||| |||||| | ||||| || ||| |||||||| || |||||||||||||
Sbjct 120 GCGAGGGTTTGGTTCGTCGGTTGACACGAA-CCATTTAAATGCCATCCGTCACTTAAGCG 178
Query 176 TGTCTCTTTCGCTCCAAAACATAAGCGGTGTTAACCAACAAGAGCAAAGGGAAAGAGATA 235
|| || ||| | |||||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct 179 TG--TC-TTCACCCCAAAACACCAGCGGTGTTAACCAACAAGAGCAAAAGGAGAGAGATC 235
Query 236 GAATCGAGAATCTTCCCGGACAGCCTTCAGTTAGTTTTACCCAATATGGCGGTTATGTGA 295
||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 236 TAATTGAGAATCTGCCCGGACAGCCTTCAGTTAGTTTTAGACAATATGGCGGTTATGTGA 295
Query 296 CCGTGAACGAGTCAGCAGGTCGATCCTTGTACTATTATTTCGTGGAAGCCACCAAAACCA 355
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 CCGTGAATGAGTCAGCAGGTCGATCCTTGTACTATTATTTCGTGGAAGCCACCAAAACCA 355
Query 356 AAGAGTCGTCACCGCTTGTTCTATGGCTAAACGGAGGACCGGGCTGCTCCTCTCTGTATG 415
|| |||| | ||| |||||||||||||||||||||||||| || || ||||| || ||||
Sbjct 356 AAAAGTCTTTACCCCTTGTTCTATGGCTAAACGGAGGACCTGGTTGTTCCTCCCTATATG 415
Query 416 GGGCATTTCAAGAGCTTGGTCCATTCCGCATACATAGCGACGGCAAAACACTCTATACCA 475
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 416 GGGCATTTCAAGAGCTTGGTCCATTCCGCATATATGGCGACGGCAAAACACTCTATACCA 475
Query 476 ATCCTTATTCATGGAACAACGTGGCGAACATATTATTCTTAGAATCTCCGGCAGGAACGG 535
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 476 ATCCTTATTCATGGAACAACGTGGCGAACATATTATTCTTAGAATCTCCAGTAGGAACGG 535
Query 536 GATTTTCGTACACGAACACAACA-ACGGATATGGAAAATCCCGGGGACATGAAAGCAGCA 594
|||| |||||||||||||| | | ||||| |||| ||||||||||||||||||||||||
Sbjct 536 GATTCTCGTACACGAACAC-AGAGTCGGATTTGGAGAATCCCGGGGACATGAAAGCAGCA 594
Query 595 GCTGATAACTACGTTTTCTTGGTGAAATGGCTGGAGAGGTTTCCGGAATATAAAGGAAGA 654
|||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 GCTGATAAATACATCTTCTTGGTGAAATGGCTGGAGAGGTTTCCGGAATATAAAGGAAGA 654
Query 655 GAATTTTACATCGCTGGTGAGAGTTACGCCGGGCACTATGTTCCACAACTCGCACAAACC 714
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 GAATTTTACATTGCTGGTGAGAGTTACGCCGGGCACTATGTTCCACAACTCGCACAAACC 714
Query 715 ATCCTTGTCCATAACAAGAACCAAACCTTCATCAACCTACGTGGCATTTTGATTGGTAAC 774
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 715 ATCCTTGTTCATAACAAGAACCAAAACTTCATCAACCTACGTGGCATTTTGATTGGTAAC 774
Query 775 CCGAGTCTGGGCGAGG-A--CGAAATGGGCGG-TGAGTATGAGTT-TTTGGCGAGCCGTG 829
|||| |||| ||| | ||||| ||| | || ||| || ||| | |||| ||
Sbjct 775 CCGACTCTGAACGACATAGTCGAAACAA-CGGGTTCGTTTGA-TTATTTAGTAAGCCATG 832
Query 830 GTTTTGTCCCTA-AAGAAACTTTCCTTAGCTTCAAGAAAAACTGCTTAGA-TGTTAACCC 887
||| || | | |||| | | ||||||||| |||| |||||||| | | || | | |
Sbjct 833 CTTTACTCTC-ACAAGATAGTCTCCTTAGCTACAAGGAAAACTGCGCA-ACTG--A-CAC 887
Query 888 TTCAGATGATACGACGT--ATTGCATCG-ATACGAGTCTGAAATTCGAAGAT-ATATTAG 943
| || | || || || ||||||||| || |||| ||||| |||| || | || |
Sbjct 888 TCCAAAA-ATG-GAGGTGGATTGCATCGCATT-GAGTATGAAAATCGACGACGACATAAA 944
Query 944 AAAGCATGAACAAATACAACATATTGGCTCCTATGTGCCTAAACACCACGTTGAC----T 999
||| |||||| ||||||||||||| |||||| |||| ||||| |||||||||| |
Sbjct 945 AAAA-ATGAACCTATACAACATATTGACTCCTACGTGCATAAACGCCACGTTGACCCCGT 1003
Query 1000 --A--A-CCAATCCAAAGAATGCACAACGGTGATGCAGTTTGATAC-GTGCGGAGA-GCA 1052
| | |||||||||||||||||| || ||| |||||| ||| || ||||||| | |||
Sbjct 1004 TGACTAACCAATCCAAAGAATGCACCACTGTGCTGCAGTATGA-ACCGTGCGGA-ATGCA 1061
Query 1053 CTACCTGGAAGCTTACTTCAACCTGCACGAGGTTCAGCGTTCAATGCACGTCACGAAACA 1112
||| | | ||||||||| |||| | | || ||||||||||| |||||||||||||||
Sbjct 1062 ATACATAGCAGCTTACTTAAACCGGGAAGACGTTCAGCGTTCCATGCACGTCACGAAATT 1121
Query 1113 GCCGTACATGTGGACACTATGTAGA-GAAGCC-CTCGGACATACTTATTGGAACAAGACG 1170
|||| ||| ||||| ||||||| | |||||| | ||| | | |||||||| |||||
Sbjct 1122 GCCGCACACGTGGATGCTATGTA-ATGAAGCCACA-GGAT-T-CA-ATTGGAACCAGACG 1176
Query 1171 GATTATTATGCATCGATGCTACCTATTCTCAAAGAGCTGATGAAACATGAGCAACTTCGA 1230
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1177 GATTATTCTGCATCGATGCTACCTATTCTCAAAGAGCTGATGAAACATGATCAACTTCGA 1236
Query 1231 GTTTGGGTGTTCAGTGGAGACACGGATGCGGTGATTTCTGT-GACAGTTACAATGTACGC 1289
|| ||||||| || ||| ||||||||| |||||||| | || ||||||||||||| ||||
Sbjct 1237 GTCTGGGTGTACACTGGCGACACGGATACGGTGATTCC-GTTGACAGTTACAATGCACGC 1295
Query 1290 ACTGAAGATGATGAATCTAACGGTTGTGACGGAATGGCTTCCCTGGTTTAGTGAAGGACA 1349
|||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||||
Sbjct 1296 TCTGAAGATGATGAATCTAACGGCTGTTACGGACTGGCTTCCGTGGTTTAGTGAAGGACA 1355
Query 1350 GGTGGGAGGTTTCACAGAGGAATACAGAGGGAATTTTAGGTTTGCCACAGTGAGAGGAGC 1409
|||||||||||||||||||||||||| ||| |||||||| | |||||||||| ||||||
Sbjct 1356 GGTGGGAGGTTTCACAGAGGAATACAAAGGCAATTTTAGATACGCCACAGTGATAGGAGC 1415
Query 1410 TGGTCATGAAGTTCCTCTTTTCAAACCTAAGGCTGCTCTTACTCTTTTTAAACATTTTAT 1469
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1416 TGGTCATGAAGTTCCTCTTTACAAACCTAAGGCTGCTCTTACTCTTTTTAAACATTTTAT 1475
Query 1470 CCTG-AACTCTCCTCTCCCTCTTACCCCTTGA 1500
|| | |||||||||||||||||||||||||||
Sbjct 1476 CC-GCAACTCTCCTCTCCCTCTTACCCCTTGA 1506
> AT3G56540.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:20950823-20951892 FORWARD LENGTH=795
Length=795
Score = 1105 bits (598), Expect = 0.0
Identities = 665/698 (95%), Gaps = 2/698 (0%)
Strand=Plus/Plus
Query 1 ATGGGAAAACTACAAGACCGGTCTATAACCACTTGTCTCTTCCTTTTCTTTTTGCAGGCA 60
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 1 ATGGGAAAACTACAAGACTGGTCTATAACCACTTGTCTCTTCCTTTTCTTTTTGCATGCA 60
Query 61 TCACAAATCCATTGCACCAGCCAATCACATGTTCGAAACCGCCTATACCGATCAAAGCGA 120
||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct 61 TCACAAACCCATTGCACCAGCCAATCACATGTTAGAAACCGTCTATACCGATCAAAGCGA 120
Query 121 GGGATTGATTCGTCAATAGACACAAGCCACTTAAATGCGATTCGTCACTTAAGCGTGTCT 180
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 121 GGGATTGGTTCGTCAATAGACACAAGCCACTTAAATGCGATTCGTCGTTTAAGCGTGTCT 180
Query 181 CTT-TCGCTCCAAAACATAAGCGGTGTTAACCAACAAGAGCAAAGGGAAAGAGATAGAAT 239
|| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 181 -TTGTCGCTCCAAAACATAAGCGGTGTTAACCAACAAGAGCAAAAGGAAAGAGATCTAAT 239
Query 240 CGAGAATCTTCCCGGACAGCCTTCAGTTAGTTTTACCCAATATGGCGGTTATGTGACCGT 299
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 240 TGAGAATCTTCCCGGACAGCCTTCAGTTAATTTTAAGCAATATGGCGGTTATGTGACCGT 299
Query 300 GAACGAGTCAGCAGGTCGATCCTTGTACTATTATTTCGTGGAAGCCACCAAAACCAAAGA 359
||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 300 GAATGAGTCAGCAGGTCGATCCTTGTACTATTATTTCGTGGAAGCCACCAATACCAAAAA 359
Query 360 GTCGTCACCGCTTGTTCTATGGCTAAACGGAGGACCGGGCTGCTCCTCTCTGTATGGGGC 419
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 CTCATCACCCCTTGTTCTATGGCTAAACGGAGGACCGGGCTGCTCCTCTCTGTATGGGGC 419
Query 420 ATTTCAAGAGCTTGGTCCATTCCGCATACATAGCGACGGCAAAACACTCTATACCAATCC 479
||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 420 ATTTCAAGAGCTTGGTCCATTCCGCGTACATAGCGACAACAAAACACTCTATACCAATCC 479
Query 480 TTATTCATGGAACAACGTGGCGAACATATTATTCTTAGAATCTCCGGCAGGAACGGGATT 539
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 480 TTATTCATGGAACAACGTGGCGAACATGTTATTCTTAGAATCTCCGGCAGGAACGGGATT 539
Query 540 TTCGTACACGAACACAACAACGGATATGGAAAATCCCGGGGACATGAAAGCAGCAGCTGA 599
|| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 540 CTCATACACGAACACAACAACGGATATGGAGAATCCCGGGGACATGAAAACAGCAGCTGA 599
Query 600 TAACTACGTTTTCTTGGTGAAATGGCTGGAGAGGTTTCCGGAATATAAAGGAAGAGAATT 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 600 TAACTACGTTTTCTTGGTGAAATGGCTGGAGAGGTTTCCGGAATATAAAGGAAGAGATTT 659
Query 660 TTACATCGCTGGTGAGAGTTACGCCGGGCACTATGTTC 697
||||||||||||||||||||||||||| ||||||||||
Sbjct 660 TTACATCGCTGGTGAGAGTTACGCCGGTCACTATGTTC 697
Score = 169 bits (91), Expect = 9e-41
Identities = 99/103 (96%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 1238 TGTTCAGTGGAGACACGGATGCGGTGATTTCTGTGACAGTTACAATGTACGCACTGAAGA 1297
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 693 TGTTCAGTGGAGACACGGATGCGGTGATTTCGGTGACAGTTACAATGTACGCACTGAAGA 752
Query 1298 TGATGAATCTAACGGTTGTGACGGAATGGCTTCCCTGGTTTAG 1340
||||||||||||||| ||| |||||||||||||| ||||||||
Sbjct 753 TGATGAATCTAACGGCTGTTACGGAATGGCTTCCGTGGTTTAG 795
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73995603330
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5